RNA–Protein interactions for RNA: ENST00000540814.1

AC006065.4-202, humanhuman

TSL 2

Gene AC006065.4, Length 410 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006065.4-202ENST00000540814 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
AC006065.4-202ENST00000540814 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
AC006065.4-202ENST00000540814 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
AC006065.4-202ENST00000540814 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
AC006065.4-202ENST00000540814 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
AC006065.4-202ENST00000540814 FOXD1Q16676 465 aa14.13□□□□□ -0.15
AC006065.4-202ENST00000540814 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
AC006065.4-202ENST00000540814 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
AC006065.4-202ENST00000540814 MSH5O43196 834 aa13.19□□□□□ -0.3
AC006065.4-202ENST00000540814 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
AC006065.4-202ENST00000540814 ADRA2BP18089 450 aa13.12□□□□□ -0.31
AC006065.4-202ENST00000540814 NISCHQ9Y2I1 1504 aa12.35□□□□□ -0.43
AC006065.4-202ENST00000540814 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
AC006065.4-202ENST00000540814 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
AC006065.4-202ENST00000540814 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
AC006065.4-202ENST00000540814 CACNB1Q02641 598 aaPredicted RBP11.69□□□□□ -0.54
AC006065.4-202ENST00000540814 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
AC006065.4-202ENST00000540814 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
AC006065.4-202ENST00000540814 HOXD11P31277 338 aaPredicted RBP11.41□□□□□ -0.58
AC006065.4-202ENST00000540814 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
AC006065.4-202ENST00000540814 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
AC006065.4-202ENST00000540814 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
AC006065.4-202ENST00000540814 ABCC9O60706 1549 aa11.23□□□□□ -0.61
AC006065.4-202ENST00000540814 CCDC180Q9P1Z9 1646 aa11.1□□□□□ -0.63
AC006065.4-202ENST00000540814 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
AC006065.4-202ENST00000540814 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
AC006065.4-202ENST00000540814 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
AC006065.4-202ENST00000540814 POTEHQ6S545 545 aa10.99□□□□□ -0.65
AC006065.4-202ENST00000540814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.65
AC006065.4-202ENST00000540814 DNAJC5BQ9UF47 199 aa10.91□□□□□ -0.66
AC006065.4-202ENST00000540814 KCNA4P22459 653 aa10.72□□□□□ -0.69
AC006065.4-202ENST00000540814 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
AC006065.4-202ENST00000540814 SPINK5Q9NQ38 1064 aaPredicted RBP10.65□□□□□ -0.7
AC006065.4-202ENST00000540814 CAPN15O75808 1086 aa10.64□□□□□ -0.71
AC006065.4-202ENST00000540814 RB1CC1Q8TDY2 1594 aa10.6□□□□□ -0.71
AC006065.4-202ENST00000540814 DSG3P32926 999 aa10.54□□□□□ -0.72
AC006065.4-202ENST00000540814 SLC4A2P04920 1241 aa10.53□□□□□ -0.72
AC006065.4-202ENST00000540814 NACADO15069 1562 aa10.5□□□□□ -0.73
AC006065.4-202ENST00000540814 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
AC006065.4-202ENST00000540814 ABCB7O75027 752 aa10.44□□□□□ -0.74
AC006065.4-202ENST00000540814 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
AC006065.4-202ENST00000540814 UNC13AQ9UPW8 1703 aa10.44□□□□□ -0.74
AC006065.4-202ENST00000540814 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
AC006065.4-202ENST00000540814 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
AC006065.4-202ENST00000540814 ZNF219Q9P2Y4 722 aaPredicted RBP10.32□□□□□ -0.76
AC006065.4-202ENST00000540814 MYO15BQ96JP2 1530 aa10.31□□□□□ -0.76
AC006065.4-202ENST00000540814 APLP2Q06481 763 aa10.3□□□□□ -0.76
AC006065.4-202ENST00000540814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
AC006065.4-202ENST00000540814 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
AC006065.4-202ENST00000540814 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
AC006065.4-202ENST00000540814 ZCCHC6Q5VYS8 1495 aaKnown RBP10.23□□□□□ -0.77
AC006065.4-202ENST00000540814 SCRIBQ14160 1630 aa10.16□□□□□ -0.78
AC006065.4-202ENST00000540814 DCAF1Q9Y4B6 1507 aa10.16□□□□□ -0.78
AC006065.4-202ENST00000540814 MYCNP04198 464 aaPredicted RBP10.14□□□□□ -0.79
AC006065.4-202ENST00000540814 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
AC006065.4-202ENST00000540814 SHROOM4Q9ULL8 1493 aa10.11□□□□□ -0.79
AC006065.4-202ENST00000540814 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
AC006065.4-202ENST00000540814 POLA2Q14181 598 aa10.09□□□□□ -0.79
AC006065.4-202ENST00000540814 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
AC006065.4-202ENST00000540814 SLC4A1APQ9BWU0 796 aaKnown RBP10.07□□□□□ -0.8
AC006065.4-202ENST00000540814 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
AC006065.4-202ENST00000540814 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
AC006065.4-202ENST00000540814 FOXD4L1Q9NU39 408 aa9.98□□□□□ -0.81
AC006065.4-202ENST00000540814 CHRDL2Q6WN34 429 aa9.91□□□□□ -0.82
AC006065.4-202ENST00000540814 ZBTB22O15209 634 aa9.87□□□□□ -0.83
AC006065.4-202ENST00000540814 SP7Q8TDD2 431 aaPredicted RBP9.86□□□□□ -0.83
AC006065.4-202ENST00000540814 OSCARQ8IYS5 282 aa9.84□□□□□ -0.83
AC006065.4-202ENST00000540814 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
AC006065.4-202ENST00000540814 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
AC006065.4-202ENST00000540814 AKT1S1Q96B36 256 aa9.75□□□□□ -0.85
AC006065.4-202ENST00000540814 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
AC006065.4-202ENST00000540814 NCAPD3P42695 1498 aa9.7□□□□□ -0.86
AC006065.4-202ENST00000540814 ATAD2BQ9ULI0 1458 aa9.68□□□□□ -0.86
AC006065.4-202ENST00000540814 SMARCA4P51532 1647 aa9.67□□□□□ -0.86
AC006065.4-202ENST00000540814 PITPNM1O00562 1244 aa9.66□□□□□ -0.86
AC006065.4-202ENST00000540814 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
AC006065.4-202ENST00000540814 CUX2O14529 1486 aa9.66□□□□□ -0.86
AC006065.4-202ENST00000540814 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
AC006065.4-202ENST00000540814 NESP48681 1621 aa9.64□□□□□ -0.87
AC006065.4-202ENST00000540814 HMGXB3Q12766 1538 aa9.63□□□□□ -0.87
AC006065.4-202ENST00000540814 PLSCR2Q9NRY7 297 aa9.62□□□□□ -0.87
AC006065.4-202ENST00000540814 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
AC006065.4-202ENST00000540814 ATXN8OSP0DMR3 200 aa9.58□□□□□ -0.88
AC006065.4-202ENST00000540814 BAZ1BQ9UIG0 1483 aaKnown RBP9.58□□□□□ -0.88
AC006065.4-202ENST00000540814 BAZ1AQ9NRL2 1556 aaPredicted RBP9.57□□□□□ -0.88
AC006065.4-202ENST00000540814 THOC2Q8NI27 1593 aaKnown RBP9.55□□□□□ -0.88
AC006065.4-202ENST00000540814 PEG3Q9GZU2 1588 aa9.55□□□□□ -0.88
AC006065.4-202ENST00000540814 FBLN2P98095 1184 aa9.55□□□□□ -0.88
AC006065.4-202ENST00000540814 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
AC006065.4-202ENST00000540814 HAX1O00165 279 aa9.53□□□□□ -0.88
AC006065.4-202ENST00000540814 KIF21AQ7Z4S6 1674 aa9.51□□□□□ -0.89
AC006065.4-202ENST00000540814 FXR2P51116 673 aaKnown RBP eCLIP9.51□□□□□ -0.89
AC006065.4-202ENST00000540814 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
AC006065.4-202ENST00000540814 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
AC006065.4-202ENST00000540814 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
AC006065.4-202ENST00000540814 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
AC006065.4-202ENST00000540814 LAMC3Q9Y6N6 1575 aa9.49□□□□□ -0.89
AC006065.4-202ENST00000540814 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
AC006065.4-202ENST00000540814 WIZO95785 1651 aa9.43□□□□□ -0.9
AC006065.4-202ENST00000540814 EVX2Q03828 476 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms