RNA–Protein interactions for RNA: ENST00000540719.1

QKI-211, Transcript of QKI, KH domain containing RNA binding, humanhuman

TSL 2

Gene QKI, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
QKI-211ENST00000540719 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
QKI-211ENST00000540719 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
QKI-211ENST00000540719 ABCC9O60706 1549 aa19.79■□□□□ 0.76
QKI-211ENST00000540719 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
QKI-211ENST00000540719 NACADO15069 1562 aa18.79■□□□□ 0.6
QKI-211ENST00000540719 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
QKI-211ENST00000540719 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
QKI-211ENST00000540719 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
QKI-211ENST00000540719 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
QKI-211ENST00000540719 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
QKI-211ENST00000540719 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
QKI-211ENST00000540719 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
QKI-211ENST00000540719 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
QKI-211ENST00000540719 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
QKI-211ENST00000540719 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
QKI-211ENST00000540719 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
QKI-211ENST00000540719 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
QKI-211ENST00000540719 CECR2Q9BXF3 1484 aa17.84■□□□□ 0.45
QKI-211ENST00000540719 NCAPD3P42695 1498 aa17.41■□□□□ 0.38
QKI-211ENST00000540719 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
QKI-211ENST00000540719 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
QKI-211ENST00000540719 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
QKI-211ENST00000540719 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
QKI-211ENST00000540719 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
QKI-211ENST00000540719 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
QKI-211ENST00000540719 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
QKI-211ENST00000540719 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
QKI-211ENST00000540719 CUX2O14529 1486 aa17.07■□□□□ 0.32
QKI-211ENST00000540719 NESP48681 1621 aa17.06■□□□□ 0.32
QKI-211ENST00000540719 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
QKI-211ENST00000540719 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
QKI-211ENST00000540719 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
QKI-211ENST00000540719 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
QKI-211ENST00000540719 WIZO95785 1651 aa16.87■□□□□ 0.29
QKI-211ENST00000540719 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
QKI-211ENST00000540719 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.28
QKI-211ENST00000540719 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
QKI-211ENST00000540719 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
QKI-211ENST00000540719 CFTRP13569 1480 aa16.69■□□□□ 0.26
QKI-211ENST00000540719 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
QKI-211ENST00000540719 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
QKI-211ENST00000540719 WDR62O43379 1518 aa16.66■□□□□ 0.26
QKI-211ENST00000540719 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
QKI-211ENST00000540719 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
QKI-211ENST00000540719 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
QKI-211ENST00000540719 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
QKI-211ENST00000540719 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
QKI-211ENST00000540719 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
QKI-211ENST00000540719 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
QKI-211ENST00000540719 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
QKI-211ENST00000540719 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
QKI-211ENST00000540719 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
QKI-211ENST00000540719 ABCC8Q09428 1581 aa16.27■□□□□ 0.2
QKI-211ENST00000540719 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
QKI-211ENST00000540719 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
QKI-211ENST00000540719 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
QKI-211ENST00000540719 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
QKI-211ENST00000540719 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
QKI-211ENST00000540719 AQRO60306 1485 aaKnown RBP eCLIP16.13■□□□□ 0.176e-9■■■■□ 25.1
QKI-211ENST00000540719 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
QKI-211ENST00000540719 CUX1P39880 1505 aa16.08■□□□□ 0.16
QKI-211ENST00000540719 SOGA1O94964 1423 aa16.07■□□□□ 0.16
QKI-211ENST00000540719 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
QKI-211ENST00000540719 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
QKI-211ENST00000540719 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
QKI-211ENST00000540719 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
QKI-211ENST00000540719 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
QKI-211ENST00000540719 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
QKI-211ENST00000540719 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
QKI-211ENST00000540719 CHD1O14646 1710 aa15.98■□□□□ 0.15
QKI-211ENST00000540719 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
QKI-211ENST00000540719 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
QKI-211ENST00000540719 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
QKI-211ENST00000540719 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
QKI-211ENST00000540719 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
QKI-211ENST00000540719 FBLN2P98095 1184 aa15.91■□□□□ 0.14
QKI-211ENST00000540719 CLASP1Q7Z460 1538 aa15.9■□□□□ 0.14
QKI-211ENST00000540719 ARAP1Q96P48 1450 aa15.9■□□□□ 0.14
QKI-211ENST00000540719 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
QKI-211ENST00000540719 SYNJ2O15056 1496 aa15.87■□□□□ 0.13
QKI-211ENST00000540719 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
QKI-211ENST00000540719 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
QKI-211ENST00000540719 CHMP7Q8WUX9 453 aaPredicted RBP15.85■□□□□ 0.13
QKI-211ENST00000540719 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
QKI-211ENST00000540719 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
QKI-211ENST00000540719 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
QKI-211ENST00000540719 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
QKI-211ENST00000540719 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
QKI-211ENST00000540719 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
QKI-211ENST00000540719 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
QKI-211ENST00000540719 NUP160Q12769 1436 aa15.72■□□□□ 0.11
QKI-211ENST00000540719 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
QKI-211ENST00000540719 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
QKI-211ENST00000540719 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
QKI-211ENST00000540719 CEP170Q5SW79 1584 aa15.67■□□□□ 0.1
QKI-211ENST00000540719 ERCC6L2Q5T890 1561 aa15.64■□□□□ 0.09
QKI-211ENST00000540719 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
QKI-211ENST00000540719 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
QKI-211ENST00000540719 IGF1RP08069 1367 aa15.55■□□□□ 0.08
QKI-211ENST00000540719 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms