RNA–Protein interactions for RNA: ENST00000540697.5

ACSF3-211, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 2

Gene ACSF3, Length 829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-211ENST00000540697 NISCHQ9Y2I1 1504 aa45.06■■■■■ 4.8
ACSF3-211ENST00000540697 CCDC180Q9P1Z9 1646 aa40.39■■■■■ 4.06
ACSF3-211ENST00000540697 ABCC9O60706 1549 aa40.3■■■■■ 4.04
ACSF3-211ENST00000540697 RB1CC1Q8TDY2 1594 aa38.39■■■■□ 3.74
ACSF3-211ENST00000540697 NACADO15069 1562 aa38.14■■■■□ 3.7
ACSF3-211ENST00000540697 DCAF8L2P0C7V8 631 aa37.96■■■■□ 3.67
ACSF3-211ENST00000540697 DNAJC5BQ9UF47 199 aa37.7■■■■□ 3.63
ACSF3-211ENST00000540697 MYO15BQ96JP2 1530 aa37.65■■■■□ 3.62
ACSF3-211ENST00000540697 UNC13AQ9UPW8 1703 aa37.57■■■■□ 3.6
ACSF3-211ENST00000540697 PABPN1Q86U42 306 aaKnown RBP eCLIP37.52■■■■□ 3.6
ACSF3-211ENST00000540697 ZCCHC6Q5VYS8 1495 aaKnown RBP37.38■■■■□ 3.57
ACSF3-211ENST00000540697 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
ACSF3-211ENST00000540697 DCAF1Q9Y4B6 1507 aa37.21■■■■□ 3.55
ACSF3-211ENST00000540697 SCRIBQ14160 1630 aa36.84■■■■□ 3.49
ACSF3-211ENST00000540697 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.48
ACSF3-211ENST00000540697 CC2D2AQ9P2K1 1620 aa36.41■■■■□ 3.42
ACSF3-211ENST00000540697 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
ACSF3-211ENST00000540697 CECR2Q9BXF3 1484 aa36.27■■■■□ 3.4
ACSF3-211ENST00000540697 NCAPD3P42695 1498 aa35.21■■■■□ 3.23
ACSF3-211ENST00000540697 SMARCA4P51532 1647 aa35.14■■■■□ 3.22
ACSF3-211ENST00000540697 ATAD2BQ9ULI0 1458 aa35.14■■■■□ 3.22
ACSF3-211ENST00000540697 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
ACSF3-211ENST00000540697 HMGXB3Q12766 1538 aa34.97■■■■□ 3.19
ACSF3-211ENST00000540697 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
ACSF3-211ENST00000540697 BAZ1BQ9UIG0 1483 aaKnown RBP34.8■■■■□ 3.16
ACSF3-211ENST00000540697 PEG3Q9GZU2 1588 aa34.79■■■■□ 3.16
ACSF3-211ENST00000540697 ERCC6Q03468 1493 aa34.77■■■■□ 3.16
ACSF3-211ENST00000540697 MROH2BQ7Z745 1585 aa34.74■■■■□ 3.15
ACSF3-211ENST00000540697 CUX2O14529 1486 aa34.66■■■■□ 3.14
ACSF3-211ENST00000540697 NESP48681 1621 aa34.66■■■■□ 3.14
ACSF3-211ENST00000540697 DNAJC5Q9H3Z4 198 aa34.5■■■■□ 3.11
ACSF3-211ENST00000540697 LAMC3Q9Y6N6 1575 aa34.41■■■■□ 3.1
ACSF3-211ENST00000540697 WIZO95785 1651 aa34.34■■■■□ 3.09
ACSF3-211ENST00000540697 THOC2Q8NI27 1593 aaKnown RBP34.3■■■■□ 3.08
ACSF3-211ENST00000540697 KIF21AQ7Z4S6 1674 aa34.22■■■■□ 3.07
ACSF3-211ENST00000540697 PDS5BQ9NTI5 1447 aa34.19■■■■□ 3.06
ACSF3-211ENST00000540697 CADPSQ9ULU8 1353 aa34.14■■■■□ 3.06
ACSF3-211ENST00000540697 RSF1Q96T23 1441 aaPredicted RBP34.04■■■■□ 3.04
ACSF3-211ENST00000540697 MRC2Q9UBG0 1479 aa33.91■■■■□ 3.02
ACSF3-211ENST00000540697 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
ACSF3-211ENST00000540697 WDR62O43379 1518 aa33.84■■■■□ 3.01
ACSF3-211ENST00000540697 CEP164Q9UPV0 1460 aa33.8■■■■□ 3
ACSF3-211ENST00000540697 CFTRP13569 1480 aa33.79■■■■□ 3
ACSF3-211ENST00000540697 FANCD2Q9BXW9 1451 aa33.77■■■■□ 3
ACSF3-211ENST00000540697 CCDC88BA6NC98 1476 aa33.5■■■□□ 2.95
ACSF3-211ENST00000540697 URB2Q14146 1524 aaKnown RBP33.5■■■□□ 2.95
ACSF3-211ENST00000540697 PRDM2Q13029 1718 aa33.48■■■□□ 2.95
ACSF3-211ENST00000540697 TOPBP1Q92547 1522 aa33.15■■■□□ 2.9
ACSF3-211ENST00000540697 IFT140Q96RY7 1462 aa33.11■■■□□ 2.89
ACSF3-211ENST00000540697 ZNF608Q9ULD9 1512 aaPredicted RBP33.07■■■□□ 2.89
ACSF3-211ENST00000540697 OSCARQ8IYS5 282 aa33.07■■■□□ 2.88
ACSF3-211ENST00000540697 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
ACSF3-211ENST00000540697 ABCC8Q09428 1581 aa33.05■■■□□ 2.88
ACSF3-211ENST00000540697 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
ACSF3-211ENST00000540697 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
ACSF3-211ENST00000540697 TARBP1Q13395 1621 aaKnown RBP32.86■■■□□ 2.85
ACSF3-211ENST00000540697 POLA1P09884 1462 aaPredicted RBP32.82■■■□□ 2.84
ACSF3-211ENST00000540697 AQRO60306 1485 aaKnown RBP eCLIP32.77■■■□□ 2.846e-6■■■■□ 23.2
ACSF3-211ENST00000540697 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.83
ACSF3-211ENST00000540697 RIMBP3CA6NJZ7 1639 aa32.69■■■□□ 2.82
ACSF3-211ENST00000540697 RIMBP3BA6NNM3 1639 aa32.69■■■□□ 2.82
ACSF3-211ENST00000540697 RIMBP3Q9UFD9 1639 aa32.69■■■□□ 2.82
ACSF3-211ENST00000540697 SOGA1O94964 1423 aa32.65■■■□□ 2.82
ACSF3-211ENST00000540697 CHD1O14646 1710 aa32.65■■■□□ 2.82
ACSF3-211ENST00000540697 FGD5Q6ZNL6 1462 aa32.64■■■□□ 2.82
ACSF3-211ENST00000540697 CUX1P39880 1505 aa32.63■■■□□ 2.81
ACSF3-211ENST00000540697 SUPT5HO00267 1087 aaKnown RBP32.59■■■□□ 2.81
ACSF3-211ENST00000540697 ARHGEF11O15085 1522 aa32.59■■■□□ 2.81
ACSF3-211ENST00000540697 TDRD9Q8NDG6 1382 aaKnown RBP32.58■■■□□ 2.81
ACSF3-211ENST00000540697 FBLN2P98095 1184 aa32.51■■■□□ 2.79
ACSF3-211ENST00000540697 WDR97A6NE52 1622 aa32.51■■■□□ 2.79
ACSF3-211ENST00000540697 SNAPC4Q5SXM2 1469 aa32.45■■■□□ 2.79
ACSF3-211ENST00000540697 GRIN2BQ13224 1484 aa32.35■■■□□ 2.77
ACSF3-211ENST00000540697 MAGI1Q96QZ7 1491 aaPredicted RBP32.35■■■□□ 2.77
ACSF3-211ENST00000540697 CYB5RLQ6IPT4 315 aa32.31■■■□□ 2.76
ACSF3-211ENST00000540697 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
ACSF3-211ENST00000540697 PBRM1Q86U86 1689 aa32.28■■■□□ 2.76
ACSF3-211ENST00000540697 CHMP7Q8WUX9 453 aaPredicted RBP32.28■■■□□ 2.76
ACSF3-211ENST00000540697 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
ACSF3-211ENST00000540697 CLASP1Q7Z460 1538 aa32.26■■■□□ 2.76
ACSF3-211ENST00000540697 ABCA10Q8WWZ4 1543 aa32.26■■■□□ 2.75
ACSF3-211ENST00000540697 SYNJ2O15056 1496 aa32.24■■■□□ 2.75
ACSF3-211ENST00000540697 SYNJ1O43426 1573 aa32.24■■■□□ 2.75
ACSF3-211ENST00000540697 ABCA5Q8WWZ7 1642 aa32.22■■■□□ 2.75
ACSF3-211ENST00000540697 BIVM-ERCC5R4GMW8 1640 aa32.14■■■□□ 2.74
ACSF3-211ENST00000540697 WRNQ14191 1432 aaPredicted RBP eCLIP32.13■■■□□ 2.73
ACSF3-211ENST00000540697 TOP2BQ02880 1626 aa32.12■■■□□ 2.73
ACSF3-211ENST00000540697 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
ACSF3-211ENST00000540697 GRIN2AQ12879 1464 aa31.96■■■□□ 2.71
ACSF3-211ENST00000540697 TRHP20396 242 aaPredicted RBP31.91■■■□□ 2.7
ACSF3-211ENST00000540697 CEP170Q5SW79 1584 aa31.86■■■□□ 2.69
ACSF3-211ENST00000540697 ERICH3Q5RHP9 1530 aa31.85■■■□□ 2.69
ACSF3-211ENST00000540697 FHAD1B1AJZ9 1412 aa31.85■■■□□ 2.69
ACSF3-211ENST00000540697 NUP160Q12769 1436 aa31.84■■■□□ 2.69
ACSF3-211ENST00000540697 ERCC6L2Q5T890 1561 aa31.79■■■□□ 2.68
ACSF3-211ENST00000540697 SHROOM2Q13796 1616 aa31.71■■■□□ 2.67
ACSF3-211ENST00000540697 RUSC2Q8N2Y8 1516 aa31.53■■■□□ 2.64
ACSF3-211ENST00000540697 PRG4Q92954 1404 aaPredicted RBP31.52■■■□□ 2.64
ACSF3-211ENST00000540697 JPH4Q96JJ6 628 aa31.49■■■□□ 2.63
ACSF3-211ENST00000540697 KIF27Q86VH2 1401 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms