RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 NISCHQ9Y2I1 1504 aa48.14■■■■■ 5.3
SOD2-212ENST00000540491 CCDC180Q9P1Z9 1646 aa43.18■■■■■ 4.5
SOD2-212ENST00000540491 ABCC9O60706 1549 aa43.12■■■■■ 4.49
SOD2-212ENST00000540491 RB1CC1Q8TDY2 1594 aa41.15■■■■■ 4.18
SOD2-212ENST00000540491 NACADO15069 1562 aa40.91■■■■■ 4.14
SOD2-212ENST00000540491 DCAF8L2P0C7V8 631 aa40.61■■■■■ 4.09
SOD2-212ENST00000540491 DNAJC5BQ9UF47 199 aa40.46■■■■■ 4.07
SOD2-212ENST00000540491 MYO15BQ96JP2 1530 aa40.44■■■■■ 4.06
SOD2-212ENST00000540491 PABPN1Q86U42 306 aaKnown RBP eCLIP40.16■■■■■ 4.02
SOD2-212ENST00000540491 UNC13AQ9UPW8 1703 aa39.97■■■■□ 3.99
SOD2-212ENST00000540491 ZCCHC6Q5VYS8 1495 aaKnown RBP39.88■■■■□ 3.97
SOD2-212ENST00000540491 DCAF1Q9Y4B6 1507 aa39.87■■■■□ 3.97
SOD2-212ENST00000540491 BICRAQ9NZM4 1560 aa39.83■■■■□ 3.97
SOD2-212ENST00000540491 SHROOM4Q9ULL8 1493 aa39.56■■■■□ 3.92
SOD2-212ENST00000540491 SCRIBQ14160 1630 aa39.22■■■■□ 3.87
SOD2-212ENST00000540491 CC2D2AQ9P2K1 1620 aa38.96■■■■□ 3.83
SOD2-212ENST00000540491 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
SOD2-212ENST00000540491 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
SOD2-212ENST00000540491 NCAPD3P42695 1498 aa37.79■■■■□ 3.64
SOD2-212ENST00000540491 ATAD2BQ9ULI0 1458 aa37.6■■■■□ 3.61
SOD2-212ENST00000540491 SMARCA2P51531 1590 aa37.54■■■■□ 3.6
SOD2-212ENST00000540491 SMARCA4P51532 1647 aa37.48■■■■□ 3.59
SOD2-212ENST00000540491 HMGXB3Q12766 1538 aa37.46■■■■□ 3.59
SOD2-212ENST00000540491 BAZ1AQ9NRL2 1556 aaPredicted RBP37.4■■■■□ 3.58
SOD2-212ENST00000540491 CUX2O14529 1486 aa37.33■■■■□ 3.57
SOD2-212ENST00000540491 DNAJC5Q9H3Z4 198 aa37.33■■■■□ 3.57
SOD2-212ENST00000540491 ERCC6Q03468 1493 aa37.32■■■■□ 3.56
SOD2-212ENST00000540491 BAZ1BQ9UIG0 1483 aaKnown RBP37.23■■■■□ 3.55
SOD2-212ENST00000540491 PEG3Q9GZU2 1588 aa37.22■■■■□ 3.55
SOD2-212ENST00000540491 MROH2BQ7Z745 1585 aa37■■■■□ 3.51
SOD2-212ENST00000540491 NESP48681 1621 aa36.99■■■■□ 3.51
SOD2-212ENST00000540491 LAMC3Q9Y6N6 1575 aa36.89■■■■□ 3.5
SOD2-212ENST00000540491 PDS5BQ9NTI5 1447 aa36.76■■■■□ 3.48
SOD2-212ENST00000540491 THOC2Q8NI27 1593 aaKnown RBP36.65■■■■□ 3.46
SOD2-212ENST00000540491 CADPSQ9ULU8 1353 aa36.64■■■■□ 3.46
SOD2-212ENST00000540491 WIZO95785 1651 aa36.49■■■■□ 3.43
SOD2-212ENST00000540491 KIF21AQ7Z4S6 1674 aa36.46■■■■□ 3.43
SOD2-212ENST00000540491 MRC2Q9UBG0 1479 aa36.34■■■■□ 3.41
SOD2-212ENST00000540491 RSF1Q96T23 1441 aaPredicted RBP36.32■■■■□ 3.4
SOD2-212ENST00000540491 WDR62O43379 1518 aa36.24■■■■□ 3.39
SOD2-212ENST00000540491 CEP164Q9UPV0 1460 aa36.2■■■■□ 3.39
SOD2-212ENST00000540491 CFTRP13569 1480 aa36.19■■■■□ 3.38
SOD2-212ENST00000540491 TOP2AP11388 1531 aaKnown RBP36.16■■■■□ 3.38
SOD2-212ENST00000540491 FANCD2Q9BXW9 1451 aa36.15■■■■□ 3.38
SOD2-212ENST00000540491 URB2Q14146 1524 aaKnown RBP35.78■■■■□ 3.32
SOD2-212ENST00000540491 CCDC88BA6NC98 1476 aa35.74■■■■□ 3.31
SOD2-212ENST00000540491 OSCARQ8IYS5 282 aa35.67■■■■□ 3.3
SOD2-212ENST00000540491 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
SOD2-212ENST00000540491 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
SOD2-212ENST00000540491 ABCC8Q09428 1581 aa35.53■■■■□ 3.28
SOD2-212ENST00000540491 IFT140Q96RY7 1462 aa35.53■■■■□ 3.28
SOD2-212ENST00000540491 TOPBP1Q92547 1522 aa35.44■■■■□ 3.26
SOD2-212ENST00000540491 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.25
SOD2-212ENST00000540491 DNMBPQ6XZF7 1577 aa35.31■■■■□ 3.24
SOD2-212ENST00000540491 EIF4G3O43432 1585 aaKnown RBP35.12■■■■□ 3.21
SOD2-212ENST00000540491 TARBP1Q13395 1621 aaKnown RBP35.08■■■■□ 3.21
SOD2-212ENST00000540491 POLA1P09884 1462 aaPredicted RBP35.08■■■■□ 3.21
SOD2-212ENST00000540491 AQRO60306 1485 aaKnown RBP eCLIP35.04■■■■□ 3.22e-9■■■■■ 39.4
SOD2-212ENST00000540491 RIMBP3CA6NJZ7 1639 aa34.99■■■■□ 3.19
SOD2-212ENST00000540491 RIMBP3BA6NNM3 1639 aa34.99■■■■□ 3.19
SOD2-212ENST00000540491 RIMBP3Q9UFD9 1639 aa34.99■■■■□ 3.19
SOD2-212ENST00000540491 SOGA1O94964 1423 aa34.98■■■■□ 3.19
SOD2-212ENST00000540491 ARHGEF11O15085 1522 aa34.95■■■■□ 3.19
SOD2-212ENST00000540491 RAD54L2Q9Y4B4 1467 aa34.89■■■■□ 3.18
SOD2-212ENST00000540491 WDR97A6NE52 1622 aa34.88■■■■□ 3.17
SOD2-212ENST00000540491 FBLN2P98095 1184 aa34.86■■■■□ 3.17
SOD2-212ENST00000540491 TDRD9Q8NDG6 1382 aaKnown RBP34.85■■■■□ 3.17
SOD2-212ENST00000540491 FGD5Q6ZNL6 1462 aa34.84■■■■□ 3.17
SOD2-212ENST00000540491 CHD1O14646 1710 aa34.79■■■■□ 3.16
SOD2-212ENST00000540491 CUX1P39880 1505 aa34.77■■■■□ 3.16
SOD2-212ENST00000540491 CYB5RLQ6IPT4 315 aa34.74■■■■□ 3.15
SOD2-212ENST00000540491 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
SOD2-212ENST00000540491 CHMP7Q8WUX9 453 aaPredicted RBP34.69■■■■□ 3.14
SOD2-212ENST00000540491 GRIN2BQ13224 1484 aa34.69■■■■□ 3.14
SOD2-212ENST00000540491 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
SOD2-212ENST00000540491 SUPT5HO00267 1087 aaKnown RBP34.65■■■■□ 3.14
SOD2-212ENST00000540491 ARAP1Q96P48 1450 aa34.58■■■■□ 3.13
SOD2-212ENST00000540491 SYNJ2O15056 1496 aa34.57■■■■□ 3.12
SOD2-212ENST00000540491 SYNJ1O43426 1573 aa34.55■■■■□ 3.12
SOD2-212ENST00000540491 GAPVD1Q14C86 1478 aa34.53■■■■□ 3.12
SOD2-212ENST00000540491 ABCA10Q8WWZ4 1543 aa34.52■■■■□ 3.12
SOD2-212ENST00000540491 CLASP1Q7Z460 1538 aa34.51■■■■□ 3.12
SOD2-212ENST00000540491 WRNQ14191 1432 aaPredicted RBP eCLIP34.42■■■■□ 3.1
SOD2-212ENST00000540491 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
SOD2-212ENST00000540491 PBRM1Q86U86 1689 aa34.36■■■■□ 3.09
SOD2-212ENST00000540491 TRHP20396 242 aaPredicted RBP34.36■■■■□ 3.09
SOD2-212ENST00000540491 TOP2BQ02880 1626 aa34.26■■■■□ 3.07
SOD2-212ENST00000540491 BIVM-ERCC5R4GMW8 1640 aa34.22■■■■□ 3.07
SOD2-212ENST00000540491 GRIN2AQ12879 1464 aa34.2■■■■□ 3.06
SOD2-212ENST00000540491 FHAD1B1AJZ9 1412 aa34.14■■■■□ 3.06
SOD2-212ENST00000540491 NUP160Q12769 1436 aa34.12■■■■□ 3.05
SOD2-212ENST00000540491 ADAMTS12P58397 1594 aa34.11■■■■□ 3.05
SOD2-212ENST00000540491 ERICH3Q5RHP9 1530 aa34.09■■■■□ 3.05
SOD2-212ENST00000540491 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
SOD2-212ENST00000540491 SHROOM2Q13796 1616 aa33.89■■■■□ 3.02
SOD2-212ENST00000540491 ERCC6L2Q5T890 1561 aa33.85■■■■□ 3.01
SOD2-212ENST00000540491 JPH4Q96JJ6 628 aa33.82■■■■□ 3
SOD2-212ENST00000540491 PRG4Q92954 1404 aaPredicted RBP33.76■■■□□ 2.99
SOD2-212ENST00000540491 KIF27Q86VH2 1401 aa33.7■■■□□ 2.98
SOD2-212ENST00000540491 IGF1RP08069 1367 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms