RNA–Protein interactions for RNA: ENST00000540436.5

CAPRIN2-210, Transcript of caprin family member 2, humanhuman

TSL 3

Gene CAPRIN2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2-210ENST00000540436 NISCHQ9Y2I1 1504 aa48.41■■■■■ 5.34
CAPRIN2-210ENST00000540436 CCDC180Q9P1Z9 1646 aa42.93■■■■■ 4.46
CAPRIN2-210ENST00000540436 ABCC9O60706 1549 aa41.13■■■■■ 4.18
CAPRIN2-210ENST00000540436 ZCCHC6Q5VYS8 1495 aaKnown RBP40.45■■■■■ 4.07
CAPRIN2-210ENST00000540436 MYO15BQ96JP2 1530 aa40.26■■■■■ 4.04
CAPRIN2-210ENST00000540436 DCAF1Q9Y4B6 1507 aa40.26■■■■■ 4.03
CAPRIN2-210ENST00000540436 NACADO15069 1562 aa40.23■■■■■ 4.03
CAPRIN2-210ENST00000540436 RB1CC1Q8TDY2 1594 aa40.11■■■■■ 4.01
CAPRIN2-210ENST00000540436 DCAF8L2P0C7V8 631 aa40.1■■■■■ 4.01
CAPRIN2-210ENST00000540436 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
CAPRIN2-210ENST00000540436 SCRIBQ14160 1630 aa38.96■■■■□ 3.83
CAPRIN2-210ENST00000540436 SHROOM4Q9ULL8 1493 aa38.71■■■■□ 3.79
CAPRIN2-210ENST00000540436 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
CAPRIN2-210ENST00000540436 PABPN1Q86U42 306 aaKnown RBP eCLIP38.47■■■■□ 3.75
CAPRIN2-210ENST00000540436 EIF4G1Q04637 1599 aaKnown RBP37.67■■■■□ 3.62
CAPRIN2-210ENST00000540436 BAZ1AQ9NRL2 1556 aaPredicted RBP37.59■■■■□ 3.61
CAPRIN2-210ENST00000540436 CECR2Q9BXF3 1484 aa37.44■■■■□ 3.58
CAPRIN2-210ENST00000540436 SMARCA4P51532 1647 aa37.43■■■■□ 3.58
CAPRIN2-210ENST00000540436 CC2D2AQ9P2K1 1620 aa37.32■■■■□ 3.57
CAPRIN2-210ENST00000540436 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
CAPRIN2-210ENST00000540436 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
CAPRIN2-210ENST00000540436 PEG3Q9GZU2 1588 aa37.14■■■■□ 3.54
CAPRIN2-210ENST00000540436 ATAD2BQ9ULI0 1458 aa37.07■■■■□ 3.52
CAPRIN2-210ENST00000540436 NCAPD3P42695 1498 aa37.04■■■■□ 3.52
CAPRIN2-210ENST00000540436 RSF1Q96T23 1441 aaPredicted RBP37.03■■■■□ 3.52
CAPRIN2-210ENST00000540436 DNAJC5BQ9UF47 199 aa37.02■■■■□ 3.52
CAPRIN2-210ENST00000540436 HMGXB3Q12766 1538 aa36.95■■■■□ 3.5
CAPRIN2-210ENST00000540436 BAZ1BQ9UIG0 1483 aaKnown RBP36.85■■■■□ 3.49
CAPRIN2-210ENST00000540436 WIZO95785 1651 aa36.81■■■■□ 3.48
CAPRIN2-210ENST00000540436 TOP2AP11388 1531 aaKnown RBP36.61■■■■□ 3.45
CAPRIN2-210ENST00000540436 SUPT5HO00267 1087 aaKnown RBP36.46■■■■□ 3.43
CAPRIN2-210ENST00000540436 CCDC88BA6NC98 1476 aa36.08■■■■□ 3.37
CAPRIN2-210ENST00000540436 LAMC3Q9Y6N6 1575 aa36.02■■■■□ 3.36
CAPRIN2-210ENST00000540436 CADPSQ9ULU8 1353 aa35.98■■■■□ 3.35
CAPRIN2-210ENST00000540436 CFTRP13569 1480 aa35.87■■■■□ 3.33
CAPRIN2-210ENST00000540436 PDS5BQ9NTI5 1447 aa35.79■■■■□ 3.32
CAPRIN2-210ENST00000540436 PRDM2Q13029 1718 aa35.73■■■■□ 3.31
CAPRIN2-210ENST00000540436 NESP48681 1621 aa35.7■■■■□ 3.31
CAPRIN2-210ENST00000540436 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
CAPRIN2-210ENST00000540436 FANCD2Q9BXW9 1451 aa35.52■■■■□ 3.28
CAPRIN2-210ENST00000540436 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
CAPRIN2-210ENST00000540436 KIF21AQ7Z4S6 1674 aa35.4■■■■□ 3.26
CAPRIN2-210ENST00000540436 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
CAPRIN2-210ENST00000540436 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
CAPRIN2-210ENST00000540436 THOC2Q8NI27 1593 aaKnown RBP35.17■■■■□ 3.22
CAPRIN2-210ENST00000540436 WDR62O43379 1518 aa35.13■■■■□ 3.21
CAPRIN2-210ENST00000540436 CUX2O14529 1486 aa35.09■■■■□ 3.21
CAPRIN2-210ENST00000540436 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
CAPRIN2-210ENST00000540436 URB2Q14146 1524 aaKnown RBP35.01■■■■□ 3.2
CAPRIN2-210ENST00000540436 WRNQ14191 1432 aaPredicted RBP eCLIP34.99■■■■□ 3.19
CAPRIN2-210ENST00000540436 TOPBP1Q92547 1522 aa34.99■■■■□ 3.19
CAPRIN2-210ENST00000540436 CUX1P39880 1505 aa34.87■■■■□ 3.17
CAPRIN2-210ENST00000540436 TOP2BQ02880 1626 aa34.86■■■■□ 3.17
CAPRIN2-210ENST00000540436 BIVM-ERCC5R4GMW8 1640 aa34.85■■■■□ 3.17
CAPRIN2-210ENST00000540436 IFT140Q96RY7 1462 aa34.74■■■■□ 3.15
CAPRIN2-210ENST00000540436 SYNJ1O43426 1573 aa34.73■■■■□ 3.15
CAPRIN2-210ENST00000540436 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
CAPRIN2-210ENST00000540436 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
CAPRIN2-210ENST00000540436 SOGA1O94964 1423 aa34.64■■■■□ 3.14
CAPRIN2-210ENST00000540436 WDR97A6NE52 1622 aa34.61■■■■□ 3.13
CAPRIN2-210ENST00000540436 TRIM41Q8WV44 630 aa34.6■■■■□ 3.13
CAPRIN2-210ENST00000540436 TARBP1Q13395 1621 aaKnown RBP34.54■■■■□ 3.12
CAPRIN2-210ENST00000540436 ABCA10Q8WWZ4 1543 aa34.5■■■■□ 3.11
CAPRIN2-210ENST00000540436 RAD54L2Q9Y4B4 1467 aa34.45■■■■□ 3.1
CAPRIN2-210ENST00000540436 CHIC1Q5VXU3 224 aa34.4■■■■□ 3.1
CAPRIN2-210ENST00000540436 KIF27Q86VH2 1401 aa34.3■■■■□ 3.08
CAPRIN2-210ENST00000540436 EIF4G3O43432 1585 aaKnown RBP34.3■■■■□ 3.08
CAPRIN2-210ENST00000540436 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
CAPRIN2-210ENST00000540436 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
CAPRIN2-210ENST00000540436 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
CAPRIN2-210ENST00000540436 TDRD9Q8NDG6 1382 aaKnown RBP34.25■■■■□ 3.07
CAPRIN2-210ENST00000540436 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
CAPRIN2-210ENST00000540436 AQRO60306 1485 aaKnown RBP eCLIP34.21■■■■□ 3.071e-6■□□□□ 9.3
CAPRIN2-210ENST00000540436 EEA1Q15075 1411 aa34.17■■■■□ 3.06
CAPRIN2-210ENST00000540436 ERICH3Q5RHP9 1530 aa34.16■■■■□ 3.06
CAPRIN2-210ENST00000540436 PBRM1Q86U86 1689 aa34.12■■■■□ 3.05
CAPRIN2-210ENST00000540436 MAGI1Q96QZ7 1491 aaPredicted RBP34.12■■■■□ 3.05
CAPRIN2-210ENST00000540436 CUL7Q14999 1698 aa33.99■■■■□ 3.03
CAPRIN2-210ENST00000540436 SNAPC4Q5SXM2 1469 aa33.98■■■■□ 3.03
CAPRIN2-210ENST00000540436 FHAD1B1AJZ9 1412 aa33.95■■■■□ 3.02
CAPRIN2-210ENST00000540436 IGF1RP08069 1367 aa33.94■■■■□ 3.02
CAPRIN2-210ENST00000540436 SYNJ2O15056 1496 aa33.93■■■■□ 3.02
CAPRIN2-210ENST00000540436 ADAMTS12P58397 1594 aa33.89■■■■□ 3.02
CAPRIN2-210ENST00000540436 CHMP7Q8WUX9 453 aaPredicted RBP33.86■■■■□ 3.01
CAPRIN2-210ENST00000540436 CSRNP3Q8WYN3 585 aa33.84■■■■□ 3.01
CAPRIN2-210ENST00000540436 CARMIL1Q5VZK9 1371 aa33.82■■■■□ 3
CAPRIN2-210ENST00000540436 RUSC2Q8N2Y8 1516 aa33.81■■■■□ 3
CAPRIN2-210ENST00000540436 FBLN2P98095 1184 aa33.75■■■□□ 2.99
CAPRIN2-210ENST00000540436 GRIN2AQ12879 1464 aa33.73■■■□□ 2.99
CAPRIN2-210ENST00000540436 RAPGEF2Q9Y4G8 1499 aa33.73■■■□□ 2.99
CAPRIN2-210ENST00000540436 CHD1O14646 1710 aa33.73■■■□□ 2.99
CAPRIN2-210ENST00000540436 OSCARQ8IYS5 282 aa33.71■■■□□ 2.99
CAPRIN2-210ENST00000540436 PRXQ9BXM0 1461 aa33.69■■■□□ 2.98
CAPRIN2-210ENST00000540436 FAM9AQ8IZU1 332 aaPredicted RBP33.61■■■□□ 2.97
CAPRIN2-210ENST00000540436 KIF21BO75037 1637 aa33.61■■■□□ 2.97
CAPRIN2-210ENST00000540436 NUP160Q12769 1436 aa33.56■■■□□ 2.96
CAPRIN2-210ENST00000540436 GOLGA3Q08378 1498 aa33.46■■■□□ 2.95
CAPRIN2-210ENST00000540436 KIAA0586Q9BVV6 1533 aa33.44■■■□□ 2.94
CAPRIN2-210ENST00000540436 CEP170Q5SW79 1584 aa33.43■■■□□ 2.94
CAPRIN2-210ENST00000540436 CLASP1Q7Z460 1538 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms