RNA–Protein interactions for RNA: ENST00000540194.5

TMEM138-208, Transcript of transmembrane protein 138, humanhuman

TSL 3

Gene TMEM138, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM138-208ENST00000540194 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
TMEM138-208ENST00000540194 CCDC180Q9P1Z9 1646 aa31.56■■■□□ 2.64
TMEM138-208ENST00000540194 ABCC9O60706 1549 aa31.05■■■□□ 2.56
TMEM138-208ENST00000540194 DCAF8L2P0C7V8 631 aa30.04■■■□□ 2.4
TMEM138-208ENST00000540194 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
TMEM138-208ENST00000540194 NACADO15069 1562 aa29.76■■■□□ 2.35
TMEM138-208ENST00000540194 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
TMEM138-208ENST00000540194 MYO15BQ96JP2 1530 aa29.53■■■□□ 2.32
TMEM138-208ENST00000540194 DCAF1Q9Y4B6 1507 aa29.41■■■□□ 2.3
TMEM138-208ENST00000540194 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.25
TMEM138-208ENST00000540194 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
TMEM138-208ENST00000540194 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
TMEM138-208ENST00000540194 BICRAQ9NZM4 1560 aa28.83■■■□□ 2.21
TMEM138-208ENST00000540194 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
TMEM138-208ENST00000540194 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
TMEM138-208ENST00000540194 EIF4G1Q04637 1599 aaKnown RBP28.12■■■□□ 2.09
TMEM138-208ENST00000540194 CC2D2AQ9P2K1 1620 aa28.01■■■□□ 2.07
TMEM138-208ENST00000540194 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.05
TMEM138-208ENST00000540194 BAZ1AQ9NRL2 1556 aaPredicted RBP27.61■■■□□ 2.01
TMEM138-208ENST00000540194 SMARCA4P51532 1647 aa27.6■■■□□ 2.01
TMEM138-208ENST00000540194 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
TMEM138-208ENST00000540194 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
TMEM138-208ENST00000540194 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
TMEM138-208ENST00000540194 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
TMEM138-208ENST00000540194 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
TMEM138-208ENST00000540194 HMGXB3Q12766 1538 aa27.29■■□□□ 1.96
TMEM138-208ENST00000540194 PEG3Q9GZU2 1588 aa27.29■■□□□ 1.96
TMEM138-208ENST00000540194 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
TMEM138-208ENST00000540194 WIZO95785 1651 aa27.15■■□□□ 1.94
TMEM138-208ENST00000540194 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
TMEM138-208ENST00000540194 NESP48681 1621 aa26.84■■□□□ 1.89
TMEM138-208ENST00000540194 ERCC6Q03468 1493 aa26.8■■□□□ 1.88
TMEM138-208ENST00000540194 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
TMEM138-208ENST00000540194 LAMC3Q9Y6N6 1575 aa26.73■■□□□ 1.87
TMEM138-208ENST00000540194 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
TMEM138-208ENST00000540194 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
TMEM138-208ENST00000540194 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
TMEM138-208ENST00000540194 CFTRP13569 1480 aa26.52■■□□□ 1.84
TMEM138-208ENST00000540194 CUX2O14529 1486 aa26.43■■□□□ 1.82
TMEM138-208ENST00000540194 KIF21AQ7Z4S6 1674 aa26.43■■□□□ 1.82
TMEM138-208ENST00000540194 FANCD2Q9BXW9 1451 aa26.41■■□□□ 1.82
TMEM138-208ENST00000540194 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
TMEM138-208ENST00000540194 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.8
TMEM138-208ENST00000540194 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
TMEM138-208ENST00000540194 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
TMEM138-208ENST00000540194 WDR62O43379 1518 aa26.18■■□□□ 1.78
TMEM138-208ENST00000540194 URB2Q14146 1524 aaKnown RBP26.1■■□□□ 1.77
TMEM138-208ENST00000540194 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
TMEM138-208ENST00000540194 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
TMEM138-208ENST00000540194 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
TMEM138-208ENST00000540194 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
TMEM138-208ENST00000540194 CUX1P39880 1505 aa25.74■■□□□ 1.71
TMEM138-208ENST00000540194 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
TMEM138-208ENST00000540194 SOGA1O94964 1423 aa25.71■■□□□ 1.71
TMEM138-208ENST00000540194 DNAJC5Q9H3Z4 198 aa25.7■■□□□ 1.7
TMEM138-208ENST00000540194 FGD5Q6ZNL6 1462 aa25.69■■□□□ 1.7
TMEM138-208ENST00000540194 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
TMEM138-208ENST00000540194 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
TMEM138-208ENST00000540194 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
TMEM138-208ENST00000540194 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
TMEM138-208ENST00000540194 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.691e-9■■□□□ 11.8
TMEM138-208ENST00000540194 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
TMEM138-208ENST00000540194 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
TMEM138-208ENST00000540194 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
TMEM138-208ENST00000540194 TOP2BQ02880 1626 aa25.51■■□□□ 1.67
TMEM138-208ENST00000540194 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
TMEM138-208ENST00000540194 BIVM-ERCC5R4GMW8 1640 aa25.47■■□□□ 1.67
TMEM138-208ENST00000540194 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
TMEM138-208ENST00000540194 FBLN2P98095 1184 aa25.42■■□□□ 1.66
TMEM138-208ENST00000540194 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
TMEM138-208ENST00000540194 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
TMEM138-208ENST00000540194 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
TMEM138-208ENST00000540194 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
TMEM138-208ENST00000540194 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
TMEM138-208ENST00000540194 MAGI1Q96QZ7 1491 aaPredicted RBP25.27■■□□□ 1.64
TMEM138-208ENST00000540194 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
TMEM138-208ENST00000540194 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
TMEM138-208ENST00000540194 CHD1O14646 1710 aa25.18■■□□□ 1.62
TMEM138-208ENST00000540194 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
TMEM138-208ENST00000540194 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
TMEM138-208ENST00000540194 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
TMEM138-208ENST00000540194 ERICH3Q5RHP9 1530 aa25.11■■□□□ 1.61
TMEM138-208ENST00000540194 FHAD1B1AJZ9 1412 aa25.09■■□□□ 1.61
TMEM138-208ENST00000540194 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
TMEM138-208ENST00000540194 IGF1RP08069 1367 aa25.03■■□□□ 1.6
TMEM138-208ENST00000540194 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
TMEM138-208ENST00000540194 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
TMEM138-208ENST00000540194 CLASP1Q7Z460 1538 aa24.92■■□□□ 1.58
TMEM138-208ENST00000540194 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
TMEM138-208ENST00000540194 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
TMEM138-208ENST00000540194 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
TMEM138-208ENST00000540194 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
TMEM138-208ENST00000540194 NUP160Q12769 1436 aa24.88■■□□□ 1.57
TMEM138-208ENST00000540194 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
TMEM138-208ENST00000540194 CUL7Q14999 1698 aa24.86■■□□□ 1.57
TMEM138-208ENST00000540194 CEP170Q5SW79 1584 aa24.85■■□□□ 1.57
TMEM138-208ENST00000540194 CYB5RLQ6IPT4 315 aa24.85■■□□□ 1.57
TMEM138-208ENST00000540194 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
TMEM138-208ENST00000540194 JPH4Q96JJ6 628 aa24.77■■□□□ 1.56
TMEM138-208ENST00000540194 ARAP1Q96P48 1450 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms