RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
PABPC1P4-201ENST00000539977 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
PABPC1P4-201ENST00000539977 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
PABPC1P4-201ENST00000539977 ZCCHC6Q5VYS8 1495 aaKnown RBP19.77■□□□□ 0.76
PABPC1P4-201ENST00000539977 ABCC9O60706 1549 aa19.73■□□□□ 0.75
PABPC1P4-201ENST00000539977 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
PABPC1P4-201ENST00000539977 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
PABPC1P4-201ENST00000539977 MYO15BQ96JP2 1530 aa19.19■□□□□ 0.66
PABPC1P4-201ENST00000539977 NACADO15069 1562 aa19.16■□□□□ 0.66
PABPC1P4-201ENST00000539977 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
PABPC1P4-201ENST00000539977 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
PABPC1P4-201ENST00000539977 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
PABPC1P4-201ENST00000539977 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
PABPC1P4-201ENST00000539977 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
PABPC1P4-201ENST00000539977 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
PABPC1P4-201ENST00000539977 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
PABPC1P4-201ENST00000539977 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
PABPC1P4-201ENST00000539977 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
PABPC1P4-201ENST00000539977 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
PABPC1P4-201ENST00000539977 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
PABPC1P4-201ENST00000539977 WIZO95785 1651 aa18.08■□□□□ 0.48
PABPC1P4-201ENST00000539977 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
PABPC1P4-201ENST00000539977 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
PABPC1P4-201ENST00000539977 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
PABPC1P4-201ENST00000539977 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
PABPC1P4-201ENST00000539977 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
PABPC1P4-201ENST00000539977 BAZ1BQ9UIG0 1483 aaKnown RBP17.8■□□□□ 0.44
PABPC1P4-201ENST00000539977 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
PABPC1P4-201ENST00000539977 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
PABPC1P4-201ENST00000539977 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
PABPC1P4-201ENST00000539977 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
PABPC1P4-201ENST00000539977 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
PABPC1P4-201ENST00000539977 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
PABPC1P4-201ENST00000539977 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
PABPC1P4-201ENST00000539977 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
PABPC1P4-201ENST00000539977 CFTRP13569 1480 aa17.33■□□□□ 0.37
PABPC1P4-201ENST00000539977 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.37
PABPC1P4-201ENST00000539977 NESP48681 1621 aa17.28■□□□□ 0.36
PABPC1P4-201ENST00000539977 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
PABPC1P4-201ENST00000539977 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
PABPC1P4-201ENST00000539977 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
PABPC1P4-201ENST00000539977 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
PABPC1P4-201ENST00000539977 LAMC3Q9Y6N6 1575 aa17.1■□□□□ 0.33
PABPC1P4-201ENST00000539977 LOC105371045A0A1W2PR82 267 aa17.07■□□□□ 0.32
PABPC1P4-201ENST00000539977 CUX1P39880 1505 aa17.07■□□□□ 0.32
PABPC1P4-201ENST00000539977 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
PABPC1P4-201ENST00000539977 EHMT2Q96KQ7 1210 aa17.05■□□□□ 0.32
PABPC1P4-201ENST00000539977 SOGA1O94964 1423 aa17.05■□□□□ 0.32
PABPC1P4-201ENST00000539977 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
PABPC1P4-201ENST00000539977 TOP2BQ02880 1626 aa17.02■□□□□ 0.32
PABPC1P4-201ENST00000539977 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.31
PABPC1P4-201ENST00000539977 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
PABPC1P4-201ENST00000539977 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
PABPC1P4-201ENST00000539977 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
PABPC1P4-201ENST00000539977 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
PABPC1P4-201ENST00000539977 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
PABPC1P4-201ENST00000539977 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
PABPC1P4-201ENST00000539977 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
PABPC1P4-201ENST00000539977 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
PABPC1P4-201ENST00000539977 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
PABPC1P4-201ENST00000539977 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
PABPC1P4-201ENST00000539977 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
PABPC1P4-201ENST00000539977 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.29
PABPC1P4-201ENST00000539977 EEA1Q15075 1411 aa16.83■□□□□ 0.28
PABPC1P4-201ENST00000539977 CUX2O14529 1486 aa16.81■□□□□ 0.28
PABPC1P4-201ENST00000539977 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
PABPC1P4-201ENST00000539977 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
PABPC1P4-201ENST00000539977 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
PABPC1P4-201ENST00000539977 ABCA10Q8WWZ4 1543 aa16.71■□□□□ 0.27
PABPC1P4-201ENST00000539977 WDR62O43379 1518 aa16.71■□□□□ 0.27
PABPC1P4-201ENST00000539977 IGF1RP08069 1367 aa16.7■□□□□ 0.26
PABPC1P4-201ENST00000539977 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
PABPC1P4-201ENST00000539977 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
PABPC1P4-201ENST00000539977 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
PABPC1P4-201ENST00000539977 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
PABPC1P4-201ENST00000539977 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
PABPC1P4-201ENST00000539977 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.25
PABPC1P4-201ENST00000539977 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
PABPC1P4-201ENST00000539977 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
PABPC1P4-201ENST00000539977 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
PABPC1P4-201ENST00000539977 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
PABPC1P4-201ENST00000539977 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
PABPC1P4-201ENST00000539977 KIF21BO75037 1637 aa16.6■□□□□ 0.25
PABPC1P4-201ENST00000539977 TNIKQ9UKE5 1360 aa16.59■□□□□ 0.25
PABPC1P4-201ENST00000539977 WDR97A6NE52 1622 aa16.58■□□□□ 0.25
PABPC1P4-201ENST00000539977 ABCA5Q8WWZ7 1642 aa16.55■□□□□ 0.24
PABPC1P4-201ENST00000539977 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
PABPC1P4-201ENST00000539977 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.23
PABPC1P4-201ENST00000539977 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
PABPC1P4-201ENST00000539977 EIF4G3O43432 1585 aaKnown RBP16.44■□□□□ 0.22
PABPC1P4-201ENST00000539977 CLIP1P30622 1438 aa16.43■□□□□ 0.22
PABPC1P4-201ENST00000539977 CUL7Q14999 1698 aa16.42■□□□□ 0.22
PABPC1P4-201ENST00000539977 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
PABPC1P4-201ENST00000539977 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
PABPC1P4-201ENST00000539977 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
PABPC1P4-201ENST00000539977 FBLN2P98095 1184 aa16.4■□□□□ 0.22
PABPC1P4-201ENST00000539977 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
PABPC1P4-201ENST00000539977 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
PABPC1P4-201ENST00000539977 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
PABPC1P4-201ENST00000539977 P3H3Q8IVL6 736 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms