RNA–Protein interactions for RNA: ENST00000539803.5

C1RL-206, Transcript of complement C1r subcomponent like, humanhuman

TSL 5

Gene C1RL, Length 1,038 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-206ENST00000539803 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
C1RL-206ENST00000539803 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
C1RL-206ENST00000539803 ABCC9O60706 1549 aa21.6■■□□□ 1.05
C1RL-206ENST00000539803 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
C1RL-206ENST00000539803 NACADO15069 1562 aa20.7■□□□□ 0.9
C1RL-206ENST00000539803 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
C1RL-206ENST00000539803 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
C1RL-206ENST00000539803 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
C1RL-206ENST00000539803 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
C1RL-206ENST00000539803 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
C1RL-206ENST00000539803 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
C1RL-206ENST00000539803 BICRAQ9NZM4 1560 aa20.14■□□□□ 0.81
C1RL-206ENST00000539803 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
C1RL-206ENST00000539803 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
C1RL-206ENST00000539803 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
C1RL-206ENST00000539803 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
C1RL-206ENST00000539803 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
C1RL-206ENST00000539803 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
C1RL-206ENST00000539803 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
C1RL-206ENST00000539803 BAZ1AQ9NRL2 1556 aaPredicted RBP19.21■□□□□ 0.67
C1RL-206ENST00000539803 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
C1RL-206ENST00000539803 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
C1RL-206ENST00000539803 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
C1RL-206ENST00000539803 SMARCA2P51531 1590 aa19.08■□□□□ 0.65
C1RL-206ENST00000539803 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
C1RL-206ENST00000539803 RSF1Q96T23 1441 aaPredicted RBP19.01■□□□□ 0.63
C1RL-206ENST00000539803 HMGXB3Q12766 1538 aa19■□□□□ 0.63
C1RL-206ENST00000539803 BAZ1BQ9UIG0 1483 aaKnown RBP18.98■□□□□ 0.63
C1RL-206ENST00000539803 WIZO95785 1651 aa18.93■□□□□ 0.62
C1RL-206ENST00000539803 NESP48681 1621 aa18.72■□□□□ 0.59
C1RL-206ENST00000539803 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
C1RL-206ENST00000539803 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
C1RL-206ENST00000539803 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
C1RL-206ENST00000539803 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
C1RL-206ENST00000539803 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
C1RL-206ENST00000539803 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
C1RL-206ENST00000539803 CFTRP13569 1480 aa18.51■□□□□ 0.55
C1RL-206ENST00000539803 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
C1RL-206ENST00000539803 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
C1RL-206ENST00000539803 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
C1RL-206ENST00000539803 CUX2O14529 1486 aa18.33■□□□□ 0.53
C1RL-206ENST00000539803 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
C1RL-206ENST00000539803 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
C1RL-206ENST00000539803 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
C1RL-206ENST00000539803 WDR62O43379 1518 aa18.21■□□□□ 0.51
C1RL-206ENST00000539803 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
C1RL-206ENST00000539803 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
C1RL-206ENST00000539803 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
C1RL-206ENST00000539803 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
C1RL-206ENST00000539803 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
C1RL-206ENST00000539803 CUX1P39880 1505 aa17.98■□□□□ 0.47
C1RL-206ENST00000539803 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
C1RL-206ENST00000539803 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
C1RL-206ENST00000539803 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
C1RL-206ENST00000539803 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
C1RL-206ENST00000539803 SOGA1O94964 1423 aa17.9■□□□□ 0.46
C1RL-206ENST00000539803 FGD5Q6ZNL6 1462 aa17.89■□□□□ 0.45
C1RL-206ENST00000539803 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
C1RL-206ENST00000539803 DNAJC5Q9H3Z4 198 aa17.87■□□□□ 0.45
C1RL-206ENST00000539803 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
C1RL-206ENST00000539803 AQRO60306 1485 aaKnown RBP eCLIP17.85■□□□□ 0.45
C1RL-206ENST00000539803 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
C1RL-206ENST00000539803 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
C1RL-206ENST00000539803 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
C1RL-206ENST00000539803 BIVM-ERCC5R4GMW8 1640 aa17.75■□□□□ 0.43
C1RL-206ENST00000539803 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
C1RL-206ENST00000539803 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
C1RL-206ENST00000539803 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
C1RL-206ENST00000539803 GAPVD1Q14C86 1478 aa17.67■□□□□ 0.42
C1RL-206ENST00000539803 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
C1RL-206ENST00000539803 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
C1RL-206ENST00000539803 FBLN2P98095 1184 aa17.63■□□□□ 0.41
C1RL-206ENST00000539803 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
C1RL-206ENST00000539803 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
C1RL-206ENST00000539803 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
C1RL-206ENST00000539803 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
C1RL-206ENST00000539803 TRIM41Q8WV44 630 aa17.54■□□□□ 0.4
C1RL-206ENST00000539803 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
C1RL-206ENST00000539803 IGF1RP08069 1367 aa17.51■□□□□ 0.39
C1RL-206ENST00000539803 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
C1RL-206ENST00000539803 CHD1O14646 1710 aa17.5■□□□□ 0.39
C1RL-206ENST00000539803 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
C1RL-206ENST00000539803 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
C1RL-206ENST00000539803 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
C1RL-206ENST00000539803 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
C1RL-206ENST00000539803 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
C1RL-206ENST00000539803 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
C1RL-206ENST00000539803 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
C1RL-206ENST00000539803 CARMIL1Q5VZK9 1371 aa17.37■□□□□ 0.37
C1RL-206ENST00000539803 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
C1RL-206ENST00000539803 NUP160Q12769 1436 aa17.36■□□□□ 0.37
C1RL-206ENST00000539803 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
C1RL-206ENST00000539803 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
C1RL-206ENST00000539803 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
C1RL-206ENST00000539803 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
C1RL-206ENST00000539803 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
C1RL-206ENST00000539803 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.36
C1RL-206ENST00000539803 CUL7Q14999 1698 aa17.26■□□□□ 0.35
C1RL-206ENST00000539803 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
C1RL-206ENST00000539803 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms