RNA–Protein interactions for RNA: ENST00000539748.1

SLC38A10-204, Transcript of solute carrier family 38 member 10, humanhuman

TSL 3

Gene SLC38A10, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-204ENST00000539748 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
SLC38A10-204ENST00000539748 ABCC9O60706 1549 aa31.64■■■□□ 2.66
SLC38A10-204ENST00000539748 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
SLC38A10-204ENST00000539748 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
SLC38A10-204ENST00000539748 NACADO15069 1562 aa29.9■■■□□ 2.38
SLC38A10-204ENST00000539748 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
SLC38A10-204ENST00000539748 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
SLC38A10-204ENST00000539748 PABPN1Q86U42 306 aaKnown RBP eCLIP29.5■■■□□ 2.31
SLC38A10-204ENST00000539748 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
SLC38A10-204ENST00000539748 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
SLC38A10-204ENST00000539748 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
SLC38A10-204ENST00000539748 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
SLC38A10-204ENST00000539748 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
SLC38A10-204ENST00000539748 SCRIBQ14160 1630 aa28.86■■■□□ 2.21
SLC38A10-204ENST00000539748 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
SLC38A10-204ENST00000539748 CC2D2AQ9P2K1 1620 aa28.53■■■□□ 2.16
SLC38A10-204ENST00000539748 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
SLC38A10-204ENST00000539748 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
SLC38A10-204ENST00000539748 NCAPD3P42695 1498 aa27.62■■■□□ 2.01
SLC38A10-204ENST00000539748 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
SLC38A10-204ENST00000539748 SMARCA4P51532 1647 aa27.51■■□□□ 1.99
SLC38A10-204ENST00000539748 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
SLC38A10-204ENST00000539748 BAZ1AQ9NRL2 1556 aaPredicted RBP27.41■■□□□ 1.98
SLC38A10-204ENST00000539748 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
SLC38A10-204ENST00000539748 ERCC6Q03468 1493 aa27.34■■□□□ 1.97
SLC38A10-204ENST00000539748 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
SLC38A10-204ENST00000539748 CUX2O14529 1486 aa27.23■■□□□ 1.95
SLC38A10-204ENST00000539748 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
SLC38A10-204ENST00000539748 MROH2BQ7Z745 1585 aa27.21■■□□□ 1.95
SLC38A10-204ENST00000539748 NESP48681 1621 aa27.17■■□□□ 1.94
SLC38A10-204ENST00000539748 DNAJC5Q9H3Z4 198 aa27.14■■□□□ 1.94
SLC38A10-204ENST00000539748 LAMC3Q9Y6N6 1575 aa26.97■■□□□ 1.91
SLC38A10-204ENST00000539748 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
SLC38A10-204ENST00000539748 WIZO95785 1651 aa26.85■■□□□ 1.89
SLC38A10-204ENST00000539748 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
SLC38A10-204ENST00000539748 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
SLC38A10-204ENST00000539748 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
SLC38A10-204ENST00000539748 RSF1Q96T23 1441 aaPredicted RBP26.68■■□□□ 1.86
SLC38A10-204ENST00000539748 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
SLC38A10-204ENST00000539748 TOP2AP11388 1531 aaKnown RBP26.56■■□□□ 1.84
SLC38A10-204ENST00000539748 CEP164Q9UPV0 1460 aa26.54■■□□□ 1.84
SLC38A10-204ENST00000539748 WDR62O43379 1518 aa26.53■■□□□ 1.84
SLC38A10-204ENST00000539748 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
SLC38A10-204ENST00000539748 CFTRP13569 1480 aa26.5■■□□□ 1.83
SLC38A10-204ENST00000539748 URB2Q14146 1524 aaKnown RBP26.26■■□□□ 1.79
SLC38A10-204ENST00000539748 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
SLC38A10-204ENST00000539748 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
SLC38A10-204ENST00000539748 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
SLC38A10-204ENST00000539748 OSCARQ8IYS5 282 aa26.02■■□□□ 1.76
SLC38A10-204ENST00000539748 IFT140Q96RY7 1462 aa26■■□□□ 1.75
SLC38A10-204ENST00000539748 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
SLC38A10-204ENST00000539748 ZNF608Q9ULD9 1512 aaPredicted RBP25.94■■□□□ 1.74
SLC38A10-204ENST00000539748 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
SLC38A10-204ENST00000539748 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
SLC38A10-204ENST00000539748 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
SLC38A10-204ENST00000539748 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
SLC38A10-204ENST00000539748 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
SLC38A10-204ENST00000539748 TARBP1Q13395 1621 aaKnown RBP25.71■■□□□ 1.71
SLC38A10-204ENST00000539748 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
SLC38A10-204ENST00000539748 SOGA1O94964 1423 aa25.64■■□□□ 1.7
SLC38A10-204ENST00000539748 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
SLC38A10-204ENST00000539748 RIMBP3CA6NJZ7 1639 aa25.61■■□□□ 1.69
SLC38A10-204ENST00000539748 RIMBP3BA6NNM3 1639 aa25.61■■□□□ 1.69
SLC38A10-204ENST00000539748 RIMBP3Q9UFD9 1639 aa25.61■■□□□ 1.69
SLC38A10-204ENST00000539748 FBLN2P98095 1184 aa25.6■■□□□ 1.69
SLC38A10-204ENST00000539748 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
SLC38A10-204ENST00000539748 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
SLC38A10-204ENST00000539748 ARHGEF11O15085 1522 aa25.58■■□□□ 1.68
SLC38A10-204ENST00000539748 CUX1P39880 1505 aa25.57■■□□□ 1.68
SLC38A10-204ENST00000539748 CHD1O14646 1710 aa25.51■■□□□ 1.67
SLC38A10-204ENST00000539748 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
SLC38A10-204ENST00000539748 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
SLC38A10-204ENST00000539748 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
SLC38A10-204ENST00000539748 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
SLC38A10-204ENST00000539748 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
SLC38A10-204ENST00000539748 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
SLC38A10-204ENST00000539748 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
SLC38A10-204ENST00000539748 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
SLC38A10-204ENST00000539748 SYNJ2O15056 1496 aa25.31■■□□□ 1.64
SLC38A10-204ENST00000539748 ABCA10Q8WWZ4 1543 aa25.3■■□□□ 1.64
SLC38A10-204ENST00000539748 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
SLC38A10-204ENST00000539748 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
SLC38A10-204ENST00000539748 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
SLC38A10-204ENST00000539748 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
SLC38A10-204ENST00000539748 PBRM1Q86U86 1689 aa25.22■■□□□ 1.63
SLC38A10-204ENST00000539748 TRHP20396 242 aaPredicted RBP25.15■■□□□ 1.62
SLC38A10-204ENST00000539748 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
SLC38A10-204ENST00000539748 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
SLC38A10-204ENST00000539748 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
SLC38A10-204ENST00000539748 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
SLC38A10-204ENST00000539748 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
SLC38A10-204ENST00000539748 NUP160Q12769 1436 aa24.98■■□□□ 1.59
SLC38A10-204ENST00000539748 ERICH3Q5RHP9 1530 aa24.97■■□□□ 1.59
SLC38A10-204ENST00000539748 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
SLC38A10-204ENST00000539748 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.58
SLC38A10-204ENST00000539748 SHROOM2Q13796 1616 aa24.81■■□□□ 1.56
SLC38A10-204ENST00000539748 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
SLC38A10-204ENST00000539748 JPH4Q96JJ6 628 aa24.75■■□□□ 1.55
SLC38A10-204ENST00000539748 KIF27Q86VH2 1401 aa24.72■■□□□ 1.55
SLC38A10-204ENST00000539748 IGF1RP08069 1367 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms