RNA–Protein interactions for RNA: ENST00000539588.2

AC005885.1-203, humanhuman

TSL 3

Gene AC005885.1, Length 787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005885.1-203ENST00000539588 NISCHQ9Y2I1 1504 aa55.16■■■■■ 6.42
AC005885.1-203ENST00000539588 CCDC180Q9P1Z9 1646 aa49.34■■■■■ 5.49
AC005885.1-203ENST00000539588 ABCC9O60706 1549 aa49.23■■■■■ 5.47
AC005885.1-203ENST00000539588 RB1CC1Q8TDY2 1594 aa46.86■■■■■ 5.09
AC005885.1-203ENST00000539588 DCAF8L2P0C7V8 631 aa46.69■■■■■ 5.06
AC005885.1-203ENST00000539588 NACADO15069 1562 aa46.57■■■■■ 5.05
AC005885.1-203ENST00000539588 DNAJC5BQ9UF47 199 aa45.96■■■■■ 4.95
AC005885.1-203ENST00000539588 UNC13AQ9UPW8 1703 aa45.95■■■■■ 4.95
AC005885.1-203ENST00000539588 PABPN1Q86U42 306 aaKnown RBP eCLIP45.93■■■■■ 4.94
AC005885.1-203ENST00000539588 MYO15BQ96JP2 1530 aa45.9■■■■■ 4.94
AC005885.1-203ENST00000539588 ZCCHC6Q5VYS8 1495 aaKnown RBP45.74■■■■■ 4.91
AC005885.1-203ENST00000539588 BICRAQ9NZM4 1560 aa45.53■■■■■ 4.88
AC005885.1-203ENST00000539588 DCAF1Q9Y4B6 1507 aa45.46■■■■■ 4.87
AC005885.1-203ENST00000539588 SCRIBQ14160 1630 aa45.13■■■■■ 4.82
AC005885.1-203ENST00000539588 SHROOM4Q9ULL8 1493 aa44.72■■■■■ 4.75
AC005885.1-203ENST00000539588 CC2D2AQ9P2K1 1620 aa44.44■■■■■ 4.7
AC005885.1-203ENST00000539588 EIF4G1Q04637 1599 aaKnown RBP44.37■■■■■ 4.69
AC005885.1-203ENST00000539588 CECR2Q9BXF3 1484 aa44.24■■■■■ 4.67
AC005885.1-203ENST00000539588 SMARCA4P51532 1647 aa43■■■■■ 4.47
AC005885.1-203ENST00000539588 NCAPD3P42695 1498 aa42.98■■■■■ 4.47
AC005885.1-203ENST00000539588 ATAD2BQ9ULI0 1458 aa42.94■■■■■ 4.47
AC005885.1-203ENST00000539588 SMARCA2P51531 1590 aa42.8■■■■■ 4.44
AC005885.1-203ENST00000539588 BAZ1AQ9NRL2 1556 aaPredicted RBP42.78■■■■■ 4.44
AC005885.1-203ENST00000539588 HMGXB3Q12766 1538 aa42.67■■■■■ 4.42
AC005885.1-203ENST00000539588 MROH2BQ7Z745 1585 aa42.57■■■■■ 4.41
AC005885.1-203ENST00000539588 BAZ1BQ9UIG0 1483 aaKnown RBP42.56■■■■■ 4.4
AC005885.1-203ENST00000539588 PEG3Q9GZU2 1588 aa42.48■■■■■ 4.39
AC005885.1-203ENST00000539588 ERCC6Q03468 1493 aa42.44■■■■■ 4.38
AC005885.1-203ENST00000539588 NESP48681 1621 aa42.38■■■■■ 4.38
AC005885.1-203ENST00000539588 CUX2O14529 1486 aa42.15■■■■■ 4.34
AC005885.1-203ENST00000539588 WIZO95785 1651 aa42.14■■■■■ 4.34
AC005885.1-203ENST00000539588 LAMC3Q9Y6N6 1575 aa42■■■■■ 4.31
AC005885.1-203ENST00000539588 DNAJC5Q9H3Z4 198 aa41.89■■■■■ 4.3
AC005885.1-203ENST00000539588 KIF21AQ7Z4S6 1674 aa41.86■■■■■ 4.29
AC005885.1-203ENST00000539588 THOC2Q8NI27 1593 aaKnown RBP41.8■■■■■ 4.28
AC005885.1-203ENST00000539588 RSF1Q96T23 1441 aaPredicted RBP41.75■■■■■ 4.27
AC005885.1-203ENST00000539588 PDS5BQ9NTI5 1447 aa41.74■■■■■ 4.27
AC005885.1-203ENST00000539588 CADPSQ9ULU8 1353 aa41.73■■■■■ 4.27
AC005885.1-203ENST00000539588 TOP2AP11388 1531 aaKnown RBP41.5■■■■■ 4.23
AC005885.1-203ENST00000539588 MRC2Q9UBG0 1479 aa41.39■■■■■ 4.22
AC005885.1-203ENST00000539588 CEP164Q9UPV0 1460 aa41.3■■■■■ 4.2
AC005885.1-203ENST00000539588 CFTRP13569 1480 aa41.29■■■■■ 4.2
AC005885.1-203ENST00000539588 FANCD2Q9BXW9 1451 aa41.29■■■■■ 4.2
AC005885.1-203ENST00000539588 WDR62O43379 1518 aa41.25■■■■■ 4.19
AC005885.1-203ENST00000539588 CCDC88BA6NC98 1476 aa41.09■■■■■ 4.17
AC005885.1-203ENST00000539588 PRDM2Q13029 1718 aa40.99■■■■■ 4.15
AC005885.1-203ENST00000539588 URB2Q14146 1524 aaKnown RBP40.95■■■■■ 4.15
AC005885.1-203ENST00000539588 TOPBP1Q92547 1522 aa40.54■■■■■ 4.08
AC005885.1-203ENST00000539588 ZNF608Q9ULD9 1512 aaPredicted RBP40.43■■■■■ 4.06
AC005885.1-203ENST00000539588 IFT140Q96RY7 1462 aa40.42■■■■■ 4.06
AC005885.1-203ENST00000539588 DNMBPQ6XZF7 1577 aa40.4■■■■■ 4.06
AC005885.1-203ENST00000539588 ABCC8Q09428 1581 aa40.38■■■■■ 4.05
AC005885.1-203ENST00000539588 OSCARQ8IYS5 282 aa40.37■■■■■ 4.05
AC005885.1-203ENST00000539588 TRIM41Q8WV44 630 aa40.34■■■■■ 4.05
AC005885.1-203ENST00000539588 SUPT5HO00267 1087 aaKnown RBP40.31■■■■■ 4.04
AC005885.1-203ENST00000539588 EIF4G3O43432 1585 aaKnown RBP40.2■■■■■ 4.03
AC005885.1-203ENST00000539588 TARBP1Q13395 1621 aaKnown RBP40.16■■■■■ 4.02
AC005885.1-203ENST00000539588 POLA1P09884 1462 aaPredicted RBP40.14■■■■■ 4.02
AC005885.1-203ENST00000539588 AQRO60306 1485 aaKnown RBP eCLIP40.12■■■■■ 4.01
AC005885.1-203ENST00000539588 RAD54L2Q9Y4B4 1467 aa40.07■■■■■ 4
AC005885.1-203ENST00000539588 SOGA1O94964 1423 aa39.99■■■■□ 3.99
AC005885.1-203ENST00000539588 CUX1P39880 1505 aa39.97■■■■□ 3.99
AC005885.1-203ENST00000539588 FGD5Q6ZNL6 1462 aa39.96■■■■□ 3.99
AC005885.1-203ENST00000539588 CHD1O14646 1710 aa39.93■■■■□ 3.98
AC005885.1-203ENST00000539588 TDRD9Q8NDG6 1382 aaKnown RBP39.92■■■■□ 3.98
AC005885.1-203ENST00000539588 FBLN2P98095 1184 aa39.88■■■■□ 3.97
AC005885.1-203ENST00000539588 RIMBP3CA6NJZ7 1639 aa39.85■■■■□ 3.97
AC005885.1-203ENST00000539588 RIMBP3BA6NNM3 1639 aa39.85■■■■□ 3.97
AC005885.1-203ENST00000539588 RIMBP3Q9UFD9 1639 aa39.85■■■■□ 3.97
AC005885.1-203ENST00000539588 ARHGEF11O15085 1522 aa39.7■■■■□ 3.95
AC005885.1-203ENST00000539588 SNAPC4Q5SXM2 1469 aa39.68■■■■□ 3.94
AC005885.1-203ENST00000539588 WDR97A6NE52 1622 aa39.64■■■■□ 3.94
AC005885.1-203ENST00000539588 GRIN2BQ13224 1484 aa39.56■■■■□ 3.92
AC005885.1-203ENST00000539588 CHMP7Q8WUX9 453 aaPredicted RBP39.54■■■■□ 3.92
AC005885.1-203ENST00000539588 PBRM1Q86U86 1689 aa39.53■■■■□ 3.92
AC005885.1-203ENST00000539588 MAGI1Q96QZ7 1491 aaPredicted RBP39.5■■■■□ 3.91
AC005885.1-203ENST00000539588 CYB5RLQ6IPT4 315 aa39.5■■■■□ 3.91
AC005885.1-203ENST00000539588 GAPVD1Q14C86 1478 aa39.49■■■■□ 3.91
AC005885.1-203ENST00000539588 ABCA10Q8WWZ4 1543 aa39.45■■■■□ 3.91
AC005885.1-203ENST00000539588 ABCA5Q8WWZ7 1642 aa39.4■■■■□ 3.9
AC005885.1-203ENST00000539588 SYNJ1O43426 1573 aa39.39■■■■□ 3.9
AC005885.1-203ENST00000539588 SYNJ2O15056 1496 aa39.39■■■■□ 3.9
AC005885.1-203ENST00000539588 WRNQ14191 1432 aaPredicted RBP eCLIP39.39■■■■□ 3.9
AC005885.1-203ENST00000539588 BIVM-ERCC5R4GMW8 1640 aa39.38■■■■□ 3.89
AC005885.1-203ENST00000539588 TOP2BQ02880 1626 aa39.37■■■■□ 3.89
AC005885.1-203ENST00000539588 ARAP1Q96P48 1450 aa39.35■■■■□ 3.89
AC005885.1-203ENST00000539588 CLASP1Q7Z460 1538 aa39.35■■■■□ 3.89
AC005885.1-203ENST00000539588 ADAMTS12P58397 1594 aa39.08■■■■□ 3.85
AC005885.1-203ENST00000539588 GRIN2AQ12879 1464 aa39.06■■■■□ 3.84
AC005885.1-203ENST00000539588 TRHP20396 242 aaPredicted RBP39■■■■□ 3.83
AC005885.1-203ENST00000539588 FHAD1B1AJZ9 1412 aa38.97■■■■□ 3.83
AC005885.1-203ENST00000539588 CEP170Q5SW79 1584 aa38.96■■■■□ 3.83
AC005885.1-203ENST00000539588 ERICH3Q5RHP9 1530 aa38.95■■■■□ 3.83
AC005885.1-203ENST00000539588 NUP160Q12769 1436 aa38.89■■■■□ 3.82
AC005885.1-203ENST00000539588 ERCC6L2Q5T890 1561 aa38.87■■■■□ 3.81
AC005885.1-203ENST00000539588 SHROOM2Q13796 1616 aa38.71■■■■□ 3.79
AC005885.1-203ENST00000539588 KIF27Q86VH2 1401 aa38.6■■■■□ 3.77
AC005885.1-203ENST00000539588 JPH4Q96JJ6 628 aa38.58■■■■□ 3.77
AC005885.1-203ENST00000539588 IGF1RP08069 1367 aa38.57■■■■□ 3.77
AC005885.1-203ENST00000539588 PRG4Q92954 1404 aaPredicted RBP38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms