RNA–Protein interactions for RNA: ENST00000538994.1

CPT1A-204, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 5 BASIC

Gene CPT1A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-204ENST00000538994 NISCHQ9Y2I1 1504 aa27.32■■□□□ 1.96
CPT1A-204ENST00000538994 CCDC180Q9P1Z9 1646 aa24.3■■□□□ 1.48
CPT1A-204ENST00000538994 ABCC9O60706 1549 aa24.08■■□□□ 1.45
CPT1A-204ENST00000538994 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
CPT1A-204ENST00000538994 NACADO15069 1562 aa22.91■■□□□ 1.26
CPT1A-204ENST00000538994 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
CPT1A-204ENST00000538994 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
CPT1A-204ENST00000538994 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
CPT1A-204ENST00000538994 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
CPT1A-204ENST00000538994 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
CPT1A-204ENST00000538994 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
CPT1A-204ENST00000538994 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
CPT1A-204ENST00000538994 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
CPT1A-204ENST00000538994 SCRIBQ14160 1630 aa22.22■■□□□ 1.15
CPT1A-204ENST00000538994 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
CPT1A-204ENST00000538994 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
CPT1A-204ENST00000538994 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
CPT1A-204ENST00000538994 CECR2Q9BXF3 1484 aa21.63■■□□□ 1.05
CPT1A-204ENST00000538994 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
CPT1A-204ENST00000538994 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
CPT1A-204ENST00000538994 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
CPT1A-204ENST00000538994 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
CPT1A-204ENST00000538994 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
CPT1A-204ENST00000538994 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
CPT1A-204ENST00000538994 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
CPT1A-204ENST00000538994 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
CPT1A-204ENST00000538994 BAZ1BQ9UIG0 1483 aaKnown RBP20.94■□□□□ 0.94
CPT1A-204ENST00000538994 WIZO95785 1651 aa20.84■□□□□ 0.93
CPT1A-204ENST00000538994 NESP48681 1621 aa20.82■□□□□ 0.92
CPT1A-204ENST00000538994 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
CPT1A-204ENST00000538994 ERCC6Q03468 1493 aa20.66■□□□□ 0.9
CPT1A-204ENST00000538994 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
CPT1A-204ENST00000538994 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
CPT1A-204ENST00000538994 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
CPT1A-204ENST00000538994 CUX2O14529 1486 aa20.54■□□□□ 0.88
CPT1A-204ENST00000538994 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
CPT1A-204ENST00000538994 THOC2Q8NI27 1593 aaKnown RBP20.51■□□□□ 0.87
CPT1A-204ENST00000538994 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
CPT1A-204ENST00000538994 CFTRP13569 1480 aa20.41■□□□□ 0.86
CPT1A-204ENST00000538994 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
CPT1A-204ENST00000538994 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
CPT1A-204ENST00000538994 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
CPT1A-204ENST00000538994 WDR62O43379 1518 aa20.27■□□□□ 0.84
CPT1A-204ENST00000538994 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
CPT1A-204ENST00000538994 DNAJC5Q9H3Z4 198 aa20.24■□□□□ 0.83
CPT1A-204ENST00000538994 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
CPT1A-204ENST00000538994 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
CPT1A-204ENST00000538994 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
CPT1A-204ENST00000538994 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
CPT1A-204ENST00000538994 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
CPT1A-204ENST00000538994 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
CPT1A-204ENST00000538994 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
CPT1A-204ENST00000538994 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
CPT1A-204ENST00000538994 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
CPT1A-204ENST00000538994 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
CPT1A-204ENST00000538994 CUX1P39880 1505 aa19.8■□□□□ 0.76
CPT1A-204ENST00000538994 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
CPT1A-204ENST00000538994 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
CPT1A-204ENST00000538994 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
CPT1A-204ENST00000538994 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
CPT1A-204ENST00000538994 SOGA1O94964 1423 aa19.69■□□□□ 0.74
CPT1A-204ENST00000538994 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
CPT1A-204ENST00000538994 TDRD9Q8NDG6 1382 aaKnown RBP19.66■□□□□ 0.74
CPT1A-204ENST00000538994 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
CPT1A-204ENST00000538994 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
CPT1A-204ENST00000538994 CHD1O14646 1710 aa19.53■□□□□ 0.72
CPT1A-204ENST00000538994 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
CPT1A-204ENST00000538994 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
CPT1A-204ENST00000538994 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
CPT1A-204ENST00000538994 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
CPT1A-204ENST00000538994 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
CPT1A-204ENST00000538994 GRIN2BQ13224 1484 aa19.47■□□□□ 0.71
CPT1A-204ENST00000538994 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
CPT1A-204ENST00000538994 FBLN2P98095 1184 aa19.45■□□□□ 0.7
CPT1A-204ENST00000538994 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
CPT1A-204ENST00000538994 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
CPT1A-204ENST00000538994 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
CPT1A-204ENST00000538994 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
CPT1A-204ENST00000538994 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
CPT1A-204ENST00000538994 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
CPT1A-204ENST00000538994 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
CPT1A-204ENST00000538994 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
CPT1A-204ENST00000538994 SYNJ2O15056 1496 aa19.37■□□□□ 0.69
CPT1A-204ENST00000538994 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
CPT1A-204ENST00000538994 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
CPT1A-204ENST00000538994 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
CPT1A-204ENST00000538994 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
CPT1A-204ENST00000538994 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
CPT1A-204ENST00000538994 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
CPT1A-204ENST00000538994 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
CPT1A-204ENST00000538994 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
CPT1A-204ENST00000538994 CEP170Q5SW79 1584 aa19.2■□□□□ 0.66
CPT1A-204ENST00000538994 NUP160Q12769 1436 aa19.19■□□□□ 0.66
CPT1A-204ENST00000538994 IGF1RP08069 1367 aa19.14■□□□□ 0.65
CPT1A-204ENST00000538994 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
CPT1A-204ENST00000538994 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
CPT1A-204ENST00000538994 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
CPT1A-204ENST00000538994 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
CPT1A-204ENST00000538994 CUL7Q14999 1698 aa18.98■□□□□ 0.63
CPT1A-204ENST00000538994 CARMIL1Q5VZK9 1371 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms