RNA–Protein interactions for RNA: ENST00000538888.5

C12orf65-206, Transcript of chromosome 12 open reading frame 65, humanhuman

TSL 3

Gene C12orf65, Length 727 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf65-206ENST00000538888 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
C12orf65-206ENST00000538888 ABCC9O60706 1549 aa24.52■■□□□ 1.52
C12orf65-206ENST00000538888 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
C12orf65-206ENST00000538888 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
C12orf65-206ENST00000538888 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.29
C12orf65-206ENST00000538888 NACADO15069 1562 aa22.9■■□□□ 1.26
C12orf65-206ENST00000538888 UNC13AQ9UPW8 1703 aa22.84■■□□□ 1.25
C12orf65-206ENST00000538888 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
C12orf65-206ENST00000538888 DCAF8L2P0C7V8 631 aa22.73■■□□□ 1.23
C12orf65-206ENST00000538888 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
C12orf65-206ENST00000538888 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
C12orf65-206ENST00000538888 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
C12orf65-206ENST00000538888 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
C12orf65-206ENST00000538888 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
C12orf65-206ENST00000538888 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
C12orf65-206ENST00000538888 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
C12orf65-206ENST00000538888 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
C12orf65-206ENST00000538888 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
C12orf65-206ENST00000538888 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
C12orf65-206ENST00000538888 CUX2O14529 1486 aa21.18■□□□□ 0.98
C12orf65-206ENST00000538888 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
C12orf65-206ENST00000538888 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
C12orf65-206ENST00000538888 ATAD2BQ9ULI0 1458 aa21.09■□□□□ 0.97
C12orf65-206ENST00000538888 NESP48681 1621 aa21.04■□□□□ 0.96
C12orf65-206ENST00000538888 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
C12orf65-206ENST00000538888 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
C12orf65-206ENST00000538888 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
C12orf65-206ENST00000538888 THOC2Q8NI27 1593 aaKnown RBP20.85■□□□□ 0.93
C12orf65-206ENST00000538888 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
C12orf65-206ENST00000538888 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
C12orf65-206ENST00000538888 BAZ1AQ9NRL2 1556 aaPredicted RBP20.79■□□□□ 0.92
C12orf65-206ENST00000538888 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
C12orf65-206ENST00000538888 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
C12orf65-206ENST00000538888 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
C12orf65-206ENST00000538888 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
C12orf65-206ENST00000538888 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
C12orf65-206ENST00000538888 WIZO95785 1651 aa20.49■□□□□ 0.87
C12orf65-206ENST00000538888 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
C12orf65-206ENST00000538888 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
C12orf65-206ENST00000538888 WDR62O43379 1518 aa20.45■□□□□ 0.86
C12orf65-206ENST00000538888 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
C12orf65-206ENST00000538888 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
C12orf65-206ENST00000538888 CFTRP13569 1480 aa20.23■□□□□ 0.83
C12orf65-206ENST00000538888 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
C12orf65-206ENST00000538888 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
C12orf65-206ENST00000538888 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
C12orf65-206ENST00000538888 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
C12orf65-206ENST00000538888 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
C12orf65-206ENST00000538888 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
C12orf65-206ENST00000538888 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
C12orf65-206ENST00000538888 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
C12orf65-206ENST00000538888 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
C12orf65-206ENST00000538888 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
C12orf65-206ENST00000538888 ARHGEF11O15085 1522 aa19.91■□□□□ 0.78
C12orf65-206ENST00000538888 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
C12orf65-206ENST00000538888 TOPBP1Q92547 1522 aa19.89■□□□□ 0.77
C12orf65-206ENST00000538888 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
C12orf65-206ENST00000538888 CHD1O14646 1710 aa19.82■□□□□ 0.76
C12orf65-206ENST00000538888 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
C12orf65-206ENST00000538888 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.76
C12orf65-206ENST00000538888 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
C12orf65-206ENST00000538888 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
C12orf65-206ENST00000538888 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
C12orf65-206ENST00000538888 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
C12orf65-206ENST00000538888 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
C12orf65-206ENST00000538888 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
C12orf65-206ENST00000538888 FBLN2P98095 1184 aa19.61■□□□□ 0.73
C12orf65-206ENST00000538888 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
C12orf65-206ENST00000538888 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
C12orf65-206ENST00000538888 SOGA1O94964 1423 aa19.54■□□□□ 0.72
C12orf65-206ENST00000538888 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
C12orf65-206ENST00000538888 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
C12orf65-206ENST00000538888 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
C12orf65-206ENST00000538888 CUX1P39880 1505 aa19.47■□□□□ 0.71
C12orf65-206ENST00000538888 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
C12orf65-206ENST00000538888 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
C12orf65-206ENST00000538888 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
C12orf65-206ENST00000538888 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
C12orf65-206ENST00000538888 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
C12orf65-206ENST00000538888 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
C12orf65-206ENST00000538888 SYNJ2O15056 1496 aa19.36■□□□□ 0.69
C12orf65-206ENST00000538888 ERCC6L2Q5T890 1561 aa19.3■□□□□ 0.68
C12orf65-206ENST00000538888 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
C12orf65-206ENST00000538888 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
C12orf65-206ENST00000538888 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
C12orf65-206ENST00000538888 CEP170Q5SW79 1584 aa19.18■□□□□ 0.66
C12orf65-206ENST00000538888 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
C12orf65-206ENST00000538888 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
C12orf65-206ENST00000538888 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
C12orf65-206ENST00000538888 SHROOM2Q13796 1616 aa19.12■□□□□ 0.65
C12orf65-206ENST00000538888 NUP160Q12769 1436 aa19.12■□□□□ 0.65
C12orf65-206ENST00000538888 KIF13AQ9H1H9 1805 aa19.11■□□□□ 0.65
C12orf65-206ENST00000538888 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
C12orf65-206ENST00000538888 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
C12orf65-206ENST00000538888 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
C12orf65-206ENST00000538888 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
C12orf65-206ENST00000538888 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
C12orf65-206ENST00000538888 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
C12orf65-206ENST00000538888 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
C12orf65-206ENST00000538888 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms