RNA–Protein interactions for RNA: ENST00000538829.5

ZNF384-210, Transcript of zinc finger protein 384, human

TSL 4

Gene ZNF384, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF384-210	ENST00000538829	NISCH	Q9Y2I1	1504 aa		18.72	■□□□□ 0.59
ZNF384-210	ENST00000538829	CCDC180	Q9P1Z9	1646 aa		16.64	■□□□□ 0.25
ZNF384-210	ENST00000538829	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.57	■□□□□ 0.24
ZNF384-210	ENST00000538829	ABCC9	O60706	1549 aa		16.51	■□□□□ 0.23
ZNF384-210	ENST00000538829	DCAF8L2	P0C7V8	631 aa		15.98	■□□□□ 0.15
ZNF384-210	ENST00000538829	CHIC1	Q5VXU3	224 aa		15.84	■□□□□ 0.13
ZNF384-210	ENST00000538829	RB1CC1	Q8TDY2	1594 aa		15.7	■□□□□ 0.1
ZNF384-210	ENST00000538829	NACAD	O15069	1562 aa		15.66	■□□□□ 0.1
ZNF384-210	ENST00000538829	ZCCHC6	Q5VYS8	1495 aa	Known RBP	15.65	■□□□□ 0.1
ZNF384-210	ENST00000538829	PABPN1	Q86U42	306 aa	Known RBP eCLIP	15.54	■□□□□ 0.08
ZNF384-210	ENST00000538829	MYO15B	Q96JP2	1530 aa		15.5	■□□□□ 0.07
ZNF384-210	ENST00000538829	DCAF1	Q9Y4B6	1507 aa		15.48	■□□□□ 0.07
ZNF384-210	ENST00000538829	DNAJC5B	Q9UF47	199 aa		15.35	■□□□□ 0.05
ZNF384-210	ENST00000538829	SCRIB	Q14160	1630 aa		15.23	■□□□□ 0.03
ZNF384-210	ENST00000538829	UNC13A	Q9UPW8	1703 aa		15.23	■□□□□ 0.03
ZNF384-210	ENST00000538829	BICRA	Q9NZM4	1560 aa		15.22	■□□□□ 0.03
ZNF384-210	ENST00000538829	SHROOM4	Q9ULL8	1493 aa		15	□□□□□ -0.01
ZNF384-210	ENST00000538829	EIF4G1	Q04637	1599 aa	Known RBP	14.84	□□□□□ -0.03
ZNF384-210	ENST00000538829	CECR2	Q9BXF3	1484 aa		14.82	□□□□□ -0.04
ZNF384-210	ENST00000538829	CC2D2A	Q9P2K1	1620 aa		14.81	□□□□□ -0.04
ZNF384-210	ENST00000538829	SMARCA4	P51532	1647 aa		14.53	□□□□□ -0.08
ZNF384-210	ENST00000538829	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	14.53	□□□□□ -0.08
ZNF384-210	ENST00000538829	NCAPD3	P42695	1498 aa		14.52	□□□□□ -0.08
ZNF384-210	ENST00000538829	ATAD2B	Q9ULI0	1458 aa		14.52	□□□□□ -0.08
ZNF384-210	ENST00000538829	MROH2B	Q7Z745	1585 aa		14.46	□□□□□ -0.09
ZNF384-210	ENST00000538829	SMARCA2	P51531	1590 aa		14.44	□□□□□ -0.1
ZNF384-210	ENST00000538829	BAZ1B	Q9UIG0	1483 aa	Known RBP	14.39	□□□□□ -0.11
ZNF384-210	ENST00000538829	PEG3	Q9GZU2	1588 aa		14.36	□□□□□ -0.11
ZNF384-210	ENST00000538829	HMGXB3	Q12766	1538 aa		14.36	□□□□□ -0.11
ZNF384-210	ENST00000538829	RSF1	Q96T23	1441 aa	Predicted RBP	14.3	□□□□□ -0.12
ZNF384-210	ENST00000538829	WIZ	O95785	1651 aa		14.28	□□□□□ -0.12
ZNF384-210	ENST00000538829	ERCC6	Q03468	1493 aa		14.24	□□□□□ -0.13
ZNF384-210	ENST00000538829	NES	P48681	1621 aa		14.23	□□□□□ -0.13
ZNF384-210	ENST00000538829	TOP2A	P11388	1531 aa	Known RBP	14.18	□□□□□ -0.14
ZNF384-210	ENST00000538829	CADPS	Q9ULU8	1353 aa		14.15	□□□□□ -0.14
ZNF384-210	ENST00000538829	PDS5B	Q9NTI5	1447 aa		14.1	□□□□□ -0.15
ZNF384-210	ENST00000538829	LAMC3	Q9Y6N6	1575 aa		14.06	□□□□□ -0.16
ZNF384-210	ENST00000538829	SUPT5H	O00267	1087 aa	Known RBP	14.06	□□□□□ -0.16
ZNF384-210	ENST00000538829	SENP3	Q9H4L4	574 aa	Predicted RBP	14.04	□□□□□ -0.16
ZNF384-210	ENST00000538829	CUX2	O14529	1486 aa		14.03	□□□□□ -0.16
ZNF384-210	ENST00000538829	CCDC88B	A6NC98	1476 aa		14	□□□□□ -0.17
ZNF384-210	ENST00000538829	CFTR	P13569	1480 aa		13.99	□□□□□ -0.17
ZNF384-210	ENST00000538829	FANCD2	Q9BXW9	1451 aa		13.95	□□□□□ -0.18
ZNF384-210	ENST00000538829	PHF23	Q9BUL5	403 aa	Predicted RBP	13.94	□□□□□ -0.18
ZNF384-210	ENST00000538829	MRC2	Q9UBG0	1479 aa		13.92	□□□□□ -0.18
ZNF384-210	ENST00000538829	CEP164	Q9UPV0	1460 aa		13.92	□□□□□ -0.18
ZNF384-210	ENST00000538829	KIF21A	Q7Z4S6	1674 aa		13.88	□□□□□ -0.19
ZNF384-210	ENST00000538829	THOC2	Q8NI27	1593 aa	Known RBP	13.88	□□□□□ -0.19
ZNF384-210	ENST00000538829	DNAJC5	Q9H3Z4	198 aa		13.87	□□□□□ -0.19
ZNF384-210	ENST00000538829	PRDM2	Q13029	1718 aa		13.85	□□□□□ -0.19
ZNF384-210	ENST00000538829	WDR62	O43379	1518 aa		13.8	□□□□□ -0.2
ZNF384-210	ENST00000538829	URB2	Q14146	1524 aa	Known RBP	13.8	□□□□□ -0.2
ZNF384-210	ENST00000538829	TOPBP1	Q92547	1522 aa		13.69	□□□□□ -0.22
ZNF384-210	ENST00000538829	ABCC8	Q09428	1581 aa		13.66	□□□□□ -0.22
ZNF384-210	ENST00000538829	IFT140	Q96RY7	1462 aa		13.64	□□□□□ -0.23
ZNF384-210	ENST00000538829	DNMBP	Q6XZF7	1577 aa		13.63	□□□□□ -0.23
ZNF384-210	ENST00000538829	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.62	□□□□□ -0.23
ZNF384-210	ENST00000538829	SOGA1	O94964	1423 aa		13.6	□□□□□ -0.23
ZNF384-210	ENST00000538829	OSCAR	Q8IYS5	282 aa		13.6	□□□□□ -0.23
ZNF384-210	ENST00000538829	AQR	O60306	1485 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	1e-10	■■■■□ 24.9
ZNF384-210	ENST00000538829	RAD54L2	Q9Y4B4	1467 aa		13.58	□□□□□ -0.24
ZNF384-210	ENST00000538829	TDRD9	Q8NDG6	1382 aa	Known RBP	13.58	□□□□□ -0.24
ZNF384-210	ENST00000538829	POLA1	P09884	1462 aa	Predicted RBP	13.57	□□□□□ -0.24
ZNF384-210	ENST00000538829	FBLN2	P98095	1184 aa		13.56	□□□□□ -0.24
ZNF384-210	ENST00000538829	CUX1	P39880	1505 aa		13.54	□□□□□ -0.24
ZNF384-210	ENST00000538829	FGD5	Q6ZNL6	1462 aa		13.54	□□□□□ -0.24
ZNF384-210	ENST00000538829	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.5	□□□□□ -0.25
ZNF384-210	ENST00000538829	SYNJ1	O43426	1573 aa		13.47	□□□□□ -0.25
ZNF384-210	ENST00000538829	TARBP1	Q13395	1621 aa	Known RBP	13.46	□□□□□ -0.25
ZNF384-210	ENST00000538829	BIVM-ERCC5	R4GMW8	1640 aa		13.46	□□□□□ -0.25
ZNF384-210	ENST00000538829	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.46	□□□□□ -0.25
ZNF384-210	ENST00000538829	TRIM41	Q8WV44	630 aa		13.46	□□□□□ -0.25
ZNF384-210	ENST00000538829	TOP2B	Q02880	1626 aa		13.46	□□□□□ -0.26
ZNF384-210	ENST00000538829	EIF4G3	O43432	1585 aa	Known RBP	13.45	□□□□□ -0.26
ZNF384-210	ENST00000538829	WDR97	A6NE52	1622 aa		13.4	□□□□□ -0.26
ZNF384-210	ENST00000538829	GRIN2B	Q13224	1484 aa		13.4	□□□□□ -0.26
ZNF384-210	ENST00000538829	GAPVD1	Q14C86	1478 aa		13.39	□□□□□ -0.27
ZNF384-210	ENST00000538829	SNAPC4	Q5SXM2	1469 aa		13.39	□□□□□ -0.27
ZNF384-210	ENST00000538829	ABCA10	Q8WWZ4	1543 aa		13.38	□□□□□ -0.27
ZNF384-210	ENST00000538829	ABCA5	Q8WWZ7	1642 aa		13.32	□□□□□ -0.28
ZNF384-210	ENST00000538829	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.32	□□□□□ -0.28
ZNF384-210	ENST00000538829	CYB5RL	Q6IPT4	315 aa		13.31	□□□□□ -0.28
ZNF384-210	ENST00000538829	PBRM1	Q86U86	1689 aa		13.31	□□□□□ -0.28
ZNF384-210	ENST00000538829	SYNJ2	O15056	1496 aa		13.29	□□□□□ -0.28
ZNF384-210	ENST00000538829	ARHGEF11	O15085	1522 aa		13.23	□□□□□ -0.29
ZNF384-210	ENST00000538829	FHAD1	B1AJZ9	1412 aa		13.23	□□□□□ -0.29
ZNF384-210	ENST00000538829	CHD1	O14646	1710 aa		13.23	□□□□□ -0.29
ZNF384-210	ENST00000538829	IGF1R	P08069	1367 aa		13.22	□□□□□ -0.29
ZNF384-210	ENST00000538829	ADAMTS12	P58397	1594 aa		13.22	□□□□□ -0.29
ZNF384-210	ENST00000538829	KIF27	Q86VH2	1401 aa		13.22	□□□□□ -0.29
ZNF384-210	ENST00000538829	ERICH3	Q5RHP9	1530 aa		13.2	□□□□□ -0.3
ZNF384-210	ENST00000538829	GRIN2A	Q12879	1464 aa		13.2	□□□□□ -0.3
ZNF384-210	ENST00000538829	RIMBP3C	A6NJZ7	1639 aa		13.2	□□□□□ -0.3
ZNF384-210	ENST00000538829	RIMBP3B	A6NNM3	1639 aa		13.2	□□□□□ -0.3
ZNF384-210	ENST00000538829	RIMBP3	Q9UFD9	1639 aa		13.2	□□□□□ -0.3
ZNF384-210	ENST00000538829	CLASP1	Q7Z460	1538 aa		13.15	□□□□□ -0.3
ZNF384-210	ENST00000538829	JPH4	Q96JJ6	628 aa		13.15	□□□□□ -0.3
ZNF384-210	ENST00000538829	CARMIL1	Q5VZK9	1371 aa		13.14	□□□□□ -0.31
ZNF384-210	ENST00000538829	ARAP1	Q96P48	1450 aa		13.14	□□□□□ -0.31
ZNF384-210	ENST00000538829	CUL7	Q14999	1698 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 971.9 ms