RNA–Protein interactions for RNA: ENST00000538473.1

IFI35-207, Transcript of interferon induced protein 35, humanhuman

TSL 3

Gene IFI35, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFI35-207ENST00000538473 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
IFI35-207ENST00000538473 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
IFI35-207ENST00000538473 ABCC9O60706 1549 aa29.86■■■□□ 2.37
IFI35-207ENST00000538473 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
IFI35-207ENST00000538473 NACADO15069 1562 aa28.7■■■□□ 2.18
IFI35-207ENST00000538473 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
IFI35-207ENST00000538473 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
IFI35-207ENST00000538473 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
IFI35-207ENST00000538473 DCAF1Q9Y4B6 1507 aa28.45■■■□□ 2.15
IFI35-207ENST00000538473 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
IFI35-207ENST00000538473 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
IFI35-207ENST00000538473 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
IFI35-207ENST00000538473 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
IFI35-207ENST00000538473 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
IFI35-207ENST00000538473 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
IFI35-207ENST00000538473 EIF4G1Q04637 1599 aaKnown RBP27.08■■□□□ 1.93
IFI35-207ENST00000538473 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
IFI35-207ENST00000538473 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
IFI35-207ENST00000538473 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
IFI35-207ENST00000538473 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
IFI35-207ENST00000538473 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
IFI35-207ENST00000538473 ATAD2BQ9ULI0 1458 aa26.54■■□□□ 1.84
IFI35-207ENST00000538473 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
IFI35-207ENST00000538473 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
IFI35-207ENST00000538473 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
IFI35-207ENST00000538473 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
IFI35-207ENST00000538473 BAZ1BQ9UIG0 1483 aaKnown RBP26.32■■□□□ 1.8
IFI35-207ENST00000538473 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
IFI35-207ENST00000538473 WIZO95785 1651 aa26.09■■□□□ 1.77
IFI35-207ENST00000538473 TOP2AP11388 1531 aaKnown RBP25.91■■□□□ 1.74
IFI35-207ENST00000538473 NESP48681 1621 aa25.81■■□□□ 1.72
IFI35-207ENST00000538473 CADPSQ9ULU8 1353 aa25.8■■□□□ 1.72
IFI35-207ENST00000538473 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
IFI35-207ENST00000538473 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
IFI35-207ENST00000538473 PDS5BQ9NTI5 1447 aa25.69■■□□□ 1.7
IFI35-207ENST00000538473 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
IFI35-207ENST00000538473 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
IFI35-207ENST00000538473 CFTRP13569 1480 aa25.61■■□□□ 1.69
IFI35-207ENST00000538473 CUX2O14529 1486 aa25.47■■□□□ 1.67
IFI35-207ENST00000538473 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
IFI35-207ENST00000538473 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
IFI35-207ENST00000538473 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
IFI35-207ENST00000538473 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
IFI35-207ENST00000538473 THOC2Q8NI27 1593 aaKnown RBP25.33■■□□□ 1.65
IFI35-207ENST00000538473 WDR62O43379 1518 aa25.23■■□□□ 1.63
IFI35-207ENST00000538473 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
IFI35-207ENST00000538473 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
IFI35-207ENST00000538473 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
IFI35-207ENST00000538473 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
IFI35-207ENST00000538473 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
IFI35-207ENST00000538473 IFT140Q96RY7 1462 aa24.9■■□□□ 1.58
IFI35-207ENST00000538473 CUX1P39880 1505 aa24.82■■□□□ 1.56
IFI35-207ENST00000538473 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
IFI35-207ENST00000538473 SOGA1O94964 1423 aa24.78■■□□□ 1.56
IFI35-207ENST00000538473 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
IFI35-207ENST00000538473 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
IFI35-207ENST00000538473 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
IFI35-207ENST00000538473 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
IFI35-207ENST00000538473 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
IFI35-207ENST00000538473 TARBP1Q13395 1621 aaKnown RBP24.67■■□□□ 1.54
IFI35-207ENST00000538473 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
IFI35-207ENST00000538473 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
IFI35-207ENST00000538473 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
IFI35-207ENST00000538473 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
IFI35-207ENST00000538473 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
IFI35-207ENST00000538473 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
IFI35-207ENST00000538473 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
IFI35-207ENST00000538473 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
IFI35-207ENST00000538473 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
IFI35-207ENST00000538473 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
IFI35-207ENST00000538473 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
IFI35-207ENST00000538473 FBLN2P98095 1184 aa24.41■■□□□ 1.5
IFI35-207ENST00000538473 SNAPC4Q5SXM2 1469 aa24.39■■□□□ 1.5
IFI35-207ENST00000538473 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
IFI35-207ENST00000538473 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
IFI35-207ENST00000538473 ABCA5Q8WWZ7 1642 aa24.34■■□□□ 1.49
IFI35-207ENST00000538473 SYNJ2O15056 1496 aa24.29■■□□□ 1.48
IFI35-207ENST00000538473 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
IFI35-207ENST00000538473 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
IFI35-207ENST00000538473 ERICH3Q5RHP9 1530 aa24.24■■□□□ 1.47
IFI35-207ENST00000538473 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
IFI35-207ENST00000538473 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
IFI35-207ENST00000538473 IGF1RP08069 1367 aa24.17■■□□□ 1.46
IFI35-207ENST00000538473 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
IFI35-207ENST00000538473 CHD1O14646 1710 aa24.13■■□□□ 1.45
IFI35-207ENST00000538473 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
IFI35-207ENST00000538473 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
IFI35-207ENST00000538473 NUP160Q12769 1436 aa24.03■■□□□ 1.44
IFI35-207ENST00000538473 CLASP1Q7Z460 1538 aa24.02■■□□□ 1.44
IFI35-207ENST00000538473 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
IFI35-207ENST00000538473 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
IFI35-207ENST00000538473 RUSC2Q8N2Y8 1516 aa23.96■■□□□ 1.43
IFI35-207ENST00000538473 CUL7Q14999 1698 aa23.95■■□□□ 1.42
IFI35-207ENST00000538473 CEP170Q5SW79 1584 aa23.93■■□□□ 1.42
IFI35-207ENST00000538473 RIMBP3CA6NJZ7 1639 aa23.9■■□□□ 1.42
IFI35-207ENST00000538473 RIMBP3BA6NNM3 1639 aa23.9■■□□□ 1.42
IFI35-207ENST00000538473 RIMBP3Q9UFD9 1639 aa23.9■■□□□ 1.42
IFI35-207ENST00000538473 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
IFI35-207ENST00000538473 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
IFI35-207ENST00000538473 RAPGEF2Q9Y4G8 1499 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms