RNA–Protein interactions for RNA: ENST00000538196.1

POLE-211, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 4

Gene POLE, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-211ENST00000538196 NISCHQ9Y2I1 1504 aa30.99■■■□□ 2.55
POLE-211ENST00000538196 ABCC9O60706 1549 aa28.02■■■□□ 2.08
POLE-211ENST00000538196 CCDC180Q9P1Z9 1646 aa27.86■■■□□ 2.05
POLE-211ENST00000538196 RB1CC1Q8TDY2 1594 aa26.68■■□□□ 1.86
POLE-211ENST00000538196 NACADO15069 1562 aa26.47■■□□□ 1.83
POLE-211ENST00000538196 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
POLE-211ENST00000538196 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
POLE-211ENST00000538196 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.771e-6■■■■■ 32.1
POLE-211ENST00000538196 MYO15BQ96JP2 1530 aa26.05■■□□□ 1.76
POLE-211ENST00000538196 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
POLE-211ENST00000538196 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
POLE-211ENST00000538196 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
POLE-211ENST00000538196 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
POLE-211ENST00000538196 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
POLE-211ENST00000538196 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
POLE-211ENST00000538196 CECR2Q9BXF3 1484 aa25.31■■□□□ 1.64
POLE-211ENST00000538196 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
POLE-211ENST00000538196 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
POLE-211ENST00000538196 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
POLE-211ENST00000538196 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
POLE-211ENST00000538196 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
POLE-211ENST00000538196 CUX2O14529 1486 aa24.3■■□□□ 1.48
POLE-211ENST00000538196 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
POLE-211ENST00000538196 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
POLE-211ENST00000538196 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
POLE-211ENST00000538196 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
POLE-211ENST00000538196 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
POLE-211ENST00000538196 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
POLE-211ENST00000538196 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
POLE-211ENST00000538196 NESP48681 1621 aa23.94■■□□□ 1.42
POLE-211ENST00000538196 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
POLE-211ENST00000538196 PDS5BQ9NTI5 1447 aa23.87■■□□□ 1.41
POLE-211ENST00000538196 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
POLE-211ENST00000538196 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
POLE-211ENST00000538196 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
POLE-211ENST00000538196 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
POLE-211ENST00000538196 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
POLE-211ENST00000538196 WIZO95785 1651 aa23.5■■□□□ 1.35
POLE-211ENST00000538196 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
POLE-211ENST00000538196 WDR62O43379 1518 aa23.44■■□□□ 1.34
POLE-211ENST00000538196 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
POLE-211ENST00000538196 TRIM41Q8WV44 630 aa23.37■■□□□ 1.33
POLE-211ENST00000538196 CFTRP13569 1480 aa23.35■■□□□ 1.33
POLE-211ENST00000538196 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
POLE-211ENST00000538196 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
POLE-211ENST00000538196 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
POLE-211ENST00000538196 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
POLE-211ENST00000538196 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
POLE-211ENST00000538196 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
POLE-211ENST00000538196 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
POLE-211ENST00000538196 PRDM2Q13029 1718 aa23■■□□□ 1.27
POLE-211ENST00000538196 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
POLE-211ENST00000538196 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
POLE-211ENST00000538196 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
POLE-211ENST00000538196 FBLN2P98095 1184 aa22.78■■□□□ 1.24
POLE-211ENST00000538196 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
POLE-211ENST00000538196 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
POLE-211ENST00000538196 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
POLE-211ENST00000538196 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
POLE-211ENST00000538196 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
POLE-211ENST00000538196 ARHGEF11O15085 1522 aa22.71■■□□□ 1.23
POLE-211ENST00000538196 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.228e-7■■■□□ 16.5
POLE-211ENST00000538196 SOGA1O94964 1423 aa22.65■■□□□ 1.22
POLE-211ENST00000538196 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.21
POLE-211ENST00000538196 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
POLE-211ENST00000538196 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
POLE-211ENST00000538196 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
POLE-211ENST00000538196 TDRD9Q8NDG6 1382 aaKnown RBP22.57■■□□□ 1.2
POLE-211ENST00000538196 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
POLE-211ENST00000538196 CHD1O14646 1710 aa22.54■■□□□ 1.2
POLE-211ENST00000538196 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
POLE-211ENST00000538196 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
POLE-211ENST00000538196 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
POLE-211ENST00000538196 GRIN2BQ13224 1484 aa22.46■■□□□ 1.19
POLE-211ENST00000538196 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
POLE-211ENST00000538196 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
POLE-211ENST00000538196 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
POLE-211ENST00000538196 SYNJ2O15056 1496 aa22.39■■□□□ 1.17
POLE-211ENST00000538196 CUX1P39880 1505 aa22.38■■□□□ 1.17
POLE-211ENST00000538196 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
POLE-211ENST00000538196 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
POLE-211ENST00000538196 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
POLE-211ENST00000538196 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
POLE-211ENST00000538196 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
POLE-211ENST00000538196 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
POLE-211ENST00000538196 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
POLE-211ENST00000538196 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
POLE-211ENST00000538196 GRIN2AQ12879 1464 aa22.11■■□□□ 1.13
POLE-211ENST00000538196 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
POLE-211ENST00000538196 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
POLE-211ENST00000538196 NUP160Q12769 1436 aa22.02■■□□□ 1.12
POLE-211ENST00000538196 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
POLE-211ENST00000538196 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
POLE-211ENST00000538196 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
POLE-211ENST00000538196 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
POLE-211ENST00000538196 CEP170Q5SW79 1584 aa21.95■■□□□ 1.11
POLE-211ENST00000538196 JPH4Q96JJ6 628 aa21.95■■□□□ 1.1
POLE-211ENST00000538196 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.1
POLE-211ENST00000538196 SHROOM2Q13796 1616 aa21.87■■□□□ 1.09
POLE-211ENST00000538196 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms