RNA–Protein interactions for RNA: ENST00000537848.5

MMP17-207, Transcript of matrix metallopeptidase 17, humanhuman

TSL 3

Gene MMP17, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-207ENST00000537848 NISCHQ9Y2I1 1504 aa40.43■■■■■ 4.06
MMP17-207ENST00000537848 CCDC180Q9P1Z9 1646 aa35.91■■■■□ 3.34
MMP17-207ENST00000537848 ABCC9O60706 1549 aa35.19■■■■□ 3.22
MMP17-207ENST00000537848 DCAF8L2P0C7V8 631 aa33.91■■■■□ 3.02
MMP17-207ENST00000537848 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
MMP17-207ENST00000537848 NACADO15069 1562 aa33.81■■■■□ 3
MMP17-207ENST00000537848 ZCCHC6Q5VYS8 1495 aaKnown RBP33.66■■■□□ 2.98
MMP17-207ENST00000537848 MYO15BQ96JP2 1530 aa33.59■■■□□ 2.97
MMP17-207ENST00000537848 DCAF1Q9Y4B6 1507 aa33.45■■■□□ 2.95
MMP17-207ENST00000537848 UNC13AQ9UPW8 1703 aa32.98■■■□□ 2.87
MMP17-207ENST00000537848 PABPN1Q86U42 306 aaKnown RBP eCLIP32.92■■■□□ 2.86
MMP17-207ENST00000537848 SCRIBQ14160 1630 aa32.79■■■□□ 2.84
MMP17-207ENST00000537848 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
MMP17-207ENST00000537848 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
MMP17-207ENST00000537848 DNAJC5BQ9UF47 199 aa32.27■■■□□ 2.76
MMP17-207ENST00000537848 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
MMP17-207ENST00000537848 CC2D2AQ9P2K1 1620 aa31.8■■■□□ 2.68
MMP17-207ENST00000537848 CECR2Q9BXF3 1484 aa31.63■■■□□ 2.65
MMP17-207ENST00000537848 SMARCA4P51532 1647 aa31.35■■■□□ 2.61
MMP17-207ENST00000537848 BAZ1AQ9NRL2 1556 aaPredicted RBP31.35■■■□□ 2.61
MMP17-207ENST00000537848 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
MMP17-207ENST00000537848 NCAPD3P42695 1498 aa31.2■■■□□ 2.58
MMP17-207ENST00000537848 SMARCA2P51531 1590 aa31.19■■■□□ 2.58
MMP17-207ENST00000537848 MROH2BQ7Z745 1585 aa31.14■■■□□ 2.58
MMP17-207ENST00000537848 PEG3Q9GZU2 1588 aa31.04■■■□□ 2.56
MMP17-207ENST00000537848 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
MMP17-207ENST00000537848 BAZ1BQ9UIG0 1483 aaKnown RBP30.97■■■□□ 2.55
MMP17-207ENST00000537848 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
MMP17-207ENST00000537848 WIZO95785 1651 aa30.8■■■□□ 2.52
MMP17-207ENST00000537848 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
MMP17-207ENST00000537848 NESP48681 1621 aa30.42■■■□□ 2.46
MMP17-207ENST00000537848 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
MMP17-207ENST00000537848 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
MMP17-207ENST00000537848 CADPSQ9ULU8 1353 aa30.32■■■□□ 2.44
MMP17-207ENST00000537848 PDS5BQ9NTI5 1447 aa30.22■■■□□ 2.43
MMP17-207ENST00000537848 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
MMP17-207ENST00000537848 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
MMP17-207ENST00000537848 CFTRP13569 1480 aa30.11■■■□□ 2.41
MMP17-207ENST00000537848 KIF21AQ7Z4S6 1674 aa30.03■■■□□ 2.4
MMP17-207ENST00000537848 CUX2O14529 1486 aa30.01■■■□□ 2.4
MMP17-207ENST00000537848 FANCD2Q9BXW9 1451 aa29.95■■■□□ 2.39
MMP17-207ENST00000537848 THOC2Q8NI27 1593 aaKnown RBP29.93■■■□□ 2.38
MMP17-207ENST00000537848 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
MMP17-207ENST00000537848 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
MMP17-207ENST00000537848 PRDM2Q13029 1718 aa29.81■■■□□ 2.36
MMP17-207ENST00000537848 WDR62O43379 1518 aa29.74■■■□□ 2.35
MMP17-207ENST00000537848 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
MMP17-207ENST00000537848 ABCC8Q09428 1581 aa29.51■■■□□ 2.31
MMP17-207ENST00000537848 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
MMP17-207ENST00000537848 TOPBP1Q92547 1522 aa29.45■■■□□ 2.31
MMP17-207ENST00000537848 DNMBPQ6XZF7 1577 aa29.42■■■□□ 2.3
MMP17-207ENST00000537848 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
MMP17-207ENST00000537848 CUX1P39880 1505 aa29.21■■■□□ 2.27
MMP17-207ENST00000537848 POLA1P09884 1462 aaPredicted RBP29.2■■■□□ 2.26
MMP17-207ENST00000537848 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.26
MMP17-207ENST00000537848 SOGA1O94964 1423 aa29.13■■■□□ 2.25
MMP17-207ENST00000537848 ZNF608Q9ULD9 1512 aaPredicted RBP29.13■■■□□ 2.25
MMP17-207ENST00000537848 TARBP1Q13395 1621 aaKnown RBP29.1■■■□□ 2.25
MMP17-207ENST00000537848 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
MMP17-207ENST00000537848 RAD54L2Q9Y4B4 1467 aa29.09■■■□□ 2.25
MMP17-207ENST00000537848 EIF4G3O43432 1585 aaKnown RBP29■■■□□ 2.23
MMP17-207ENST00000537848 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.236e-12■■■□□ 18.3
MMP17-207ENST00000537848 TOP2BQ02880 1626 aa28.98■■■□□ 2.23
MMP17-207ENST00000537848 TDRD9Q8NDG6 1382 aaKnown RBP28.96■■■□□ 2.23
MMP17-207ENST00000537848 SYNJ1O43426 1573 aa28.95■■■□□ 2.22
MMP17-207ENST00000537848 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
MMP17-207ENST00000537848 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
MMP17-207ENST00000537848 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
MMP17-207ENST00000537848 OSCARQ8IYS5 282 aa28.84■■■□□ 2.21
MMP17-207ENST00000537848 GRIN2BQ13224 1484 aa28.78■■■□□ 2.2
MMP17-207ENST00000537848 GAPVD1Q14C86 1478 aa28.78■■■□□ 2.2
MMP17-207ENST00000537848 FBLN2P98095 1184 aa28.73■■■□□ 2.19
MMP17-207ENST00000537848 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
MMP17-207ENST00000537848 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
MMP17-207ENST00000537848 MAGI1Q96QZ7 1491 aaPredicted RBP28.69■■■□□ 2.18
MMP17-207ENST00000537848 PBRM1Q86U86 1689 aa28.65■■■□□ 2.18
MMP17-207ENST00000537848 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
MMP17-207ENST00000537848 CHD1O14646 1710 aa28.61■■■□□ 2.17
MMP17-207ENST00000537848 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
MMP17-207ENST00000537848 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
MMP17-207ENST00000537848 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
MMP17-207ENST00000537848 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
MMP17-207ENST00000537848 FHAD1B1AJZ9 1412 aa28.46■■■□□ 2.15
MMP17-207ENST00000537848 ADAMTS12P58397 1594 aa28.44■■■□□ 2.14
MMP17-207ENST00000537848 GRIN2AQ12879 1464 aa28.39■■■□□ 2.13
MMP17-207ENST00000537848 IGF1RP08069 1367 aa28.36■■■□□ 2.13
MMP17-207ENST00000537848 CLASP1Q7Z460 1538 aa28.32■■■□□ 2.12
MMP17-207ENST00000537848 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
MMP17-207ENST00000537848 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
MMP17-207ENST00000537848 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
MMP17-207ENST00000537848 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
MMP17-207ENST00000537848 NUP160Q12769 1436 aa28.26■■■□□ 2.11
MMP17-207ENST00000537848 CUL7Q14999 1698 aa28.26■■■□□ 2.11
MMP17-207ENST00000537848 CARMIL1Q5VZK9 1371 aa28.22■■■□□ 2.11
MMP17-207ENST00000537848 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
MMP17-207ENST00000537848 RUSC2Q8N2Y8 1516 aa28.17■■■□□ 2.1
MMP17-207ENST00000537848 CYB5RLQ6IPT4 315 aa28.11■■■□□ 2.09
MMP17-207ENST00000537848 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
MMP17-207ENST00000537848 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
MMP17-207ENST00000537848 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms