RNA–Protein interactions for RNA: ENST00000537817.5

C12orf43-206, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C12orf43, Length 1,270 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-206ENST00000537817 NISCHQ9Y2I1 1504 aa44.81■■■■■ 4.76
C12orf43-206ENST00000537817 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
C12orf43-206ENST00000537817 ABCC9O60706 1549 aa38.63■■■■□ 3.77
C12orf43-206ENST00000537817 ZCCHC6Q5VYS8 1495 aaKnown RBP37.39■■■■□ 3.58
C12orf43-206ENST00000537817 NACADO15069 1562 aa37.3■■■■□ 3.56
C12orf43-206ENST00000537817 RB1CC1Q8TDY2 1594 aa37.26■■■■□ 3.56
C12orf43-206ENST00000537817 MYO15BQ96JP2 1530 aa37.24■■■■□ 3.55
C12orf43-206ENST00000537817 DCAF8L2P0C7V8 631 aa37.2■■■■□ 3.55
C12orf43-206ENST00000537817 DCAF1Q9Y4B6 1507 aa37.14■■■■□ 3.54
C12orf43-206ENST00000537817 UNC13AQ9UPW8 1703 aa36.27■■■■□ 3.4
C12orf43-206ENST00000537817 SCRIBQ14160 1630 aa36.19■■■■□ 3.38
C12orf43-206ENST00000537817 BICRAQ9NZM4 1560 aa36.16■■■■□ 3.38
C12orf43-206ENST00000537817 PABPN1Q86U42 306 aaKnown RBP eCLIP36.13■■■■□ 3.37
C12orf43-206ENST00000537817 SHROOM4Q9ULL8 1493 aa35.88■■■■□ 3.33
C12orf43-206ENST00000537817 DNAJC5BQ9UF47 199 aa35.31■■■■□ 3.24
C12orf43-206ENST00000537817 EIF4G1Q04637 1599 aaKnown RBP35.17■■■■□ 3.22
C12orf43-206ENST00000537817 CC2D2AQ9P2K1 1620 aa34.93■■■■□ 3.18
C12orf43-206ENST00000537817 CECR2Q9BXF3 1484 aa34.88■■■■□ 3.17
C12orf43-206ENST00000537817 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.14
C12orf43-206ENST00000537817 SMARCA4P51532 1647 aa34.68■■■■□ 3.14
C12orf43-206ENST00000537817 MROH2BQ7Z745 1585 aa34.52■■■■□ 3.12
C12orf43-206ENST00000537817 ATAD2BQ9ULI0 1458 aa34.5■■■■□ 3.11
C12orf43-206ENST00000537817 NCAPD3P42695 1498 aa34.47■■■■□ 3.11
C12orf43-206ENST00000537817 SMARCA2P51531 1590 aa34.44■■■■□ 3.1
C12orf43-206ENST00000537817 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
C12orf43-206ENST00000537817 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
C12orf43-206ENST00000537817 RSF1Q96T23 1441 aaPredicted RBP34.24■■■■□ 3.07
C12orf43-206ENST00000537817 BAZ1BQ9UIG0 1483 aaKnown RBP34.18■■■■□ 3.06
C12orf43-206ENST00000537817 WIZO95785 1651 aa34.08■■■■□ 3.05
C12orf43-206ENST00000537817 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3
C12orf43-206ENST00000537817 NESP48681 1621 aa33.5■■■□□ 2.95
C12orf43-206ENST00000537817 LAMC3Q9Y6N6 1575 aa33.46■■■□□ 2.95
C12orf43-206ENST00000537817 CADPSQ9ULU8 1353 aa33.46■■■□□ 2.95
C12orf43-206ENST00000537817 CCDC88BA6NC98 1476 aa33.42■■■□□ 2.94
C12orf43-206ENST00000537817 SUPT5HO00267 1087 aaKnown RBP33.41■■■□□ 2.94
C12orf43-206ENST00000537817 CFTRP13569 1480 aa33.31■■■□□ 2.92
C12orf43-206ENST00000537817 ERCC6Q03468 1493 aa33.26■■■□□ 2.92
C12orf43-206ENST00000537817 PDS5BQ9NTI5 1447 aa33.25■■■□□ 2.91
C12orf43-206ENST00000537817 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
C12orf43-206ENST00000537817 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.88
C12orf43-206ENST00000537817 CEP164Q9UPV0 1460 aa32.97■■■□□ 2.87
C12orf43-206ENST00000537817 THOC2Q8NI27 1593 aaKnown RBP32.95■■■□□ 2.86
C12orf43-206ENST00000537817 CUX2O14529 1486 aa32.91■■■□□ 2.86
C12orf43-206ENST00000537817 MRC2Q9UBG0 1479 aa32.9■■■□□ 2.86
C12orf43-206ENST00000537817 PRDM2Q13029 1718 aa32.88■■■□□ 2.85
C12orf43-206ENST00000537817 WDR62O43379 1518 aa32.78■■■□□ 2.84
C12orf43-206ENST00000537817 URB2Q14146 1524 aaKnown RBP32.71■■■□□ 2.83
C12orf43-206ENST00000537817 ABCC8Q09428 1581 aa32.55■■■□□ 2.8
C12orf43-206ENST00000537817 TOPBP1Q92547 1522 aa32.54■■■□□ 2.8
C12orf43-206ENST00000537817 DNMBPQ6XZF7 1577 aa32.5■■■□□ 2.79
C12orf43-206ENST00000537817 CUX1P39880 1505 aa32.37■■■□□ 2.77
C12orf43-206ENST00000537817 IFT140Q96RY7 1462 aa32.3■■■□□ 2.76
C12orf43-206ENST00000537817 POLA1P09884 1462 aaPredicted RBP32.29■■■□□ 2.76
C12orf43-206ENST00000537817 WRNQ14191 1432 aaPredicted RBP eCLIP32.25■■■□□ 2.75
C12orf43-206ENST00000537817 FGD5Q6ZNL6 1462 aa32.22■■■□□ 2.75
C12orf43-206ENST00000537817 TARBP1Q13395 1621 aaKnown RBP32.15■■■□□ 2.74
C12orf43-206ENST00000537817 DNAJC5Q9H3Z4 198 aa32.14■■■□□ 2.74
C12orf43-206ENST00000537817 SOGA1O94964 1423 aa32.14■■■□□ 2.74
C12orf43-206ENST00000537817 TOP2BQ02880 1626 aa32.13■■■□□ 2.73
C12orf43-206ENST00000537817 SYNJ1O43426 1573 aa32.12■■■□□ 2.73
C12orf43-206ENST00000537817 ZNF608Q9ULD9 1512 aaPredicted RBP32.11■■■□□ 2.73
C12orf43-206ENST00000537817 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
C12orf43-206ENST00000537817 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
C12orf43-206ENST00000537817 ABCA10Q8WWZ4 1543 aa31.95■■■□□ 2.71
C12orf43-206ENST00000537817 EIF4G3O43432 1585 aaKnown RBP31.95■■■□□ 2.71
C12orf43-206ENST00000537817 AQRO60306 1485 aaKnown RBP eCLIP31.95■■■□□ 2.72e-6■■■■■ 26.8
C12orf43-206ENST00000537817 TDRD9Q8NDG6 1382 aaKnown RBP31.94■■■□□ 2.7
C12orf43-206ENST00000537817 WDR97A6NE52 1622 aa31.93■■■□□ 2.7
C12orf43-206ENST00000537817 ABCA5Q8WWZ7 1642 aa31.77■■■□□ 2.68
C12orf43-206ENST00000537817 GAPVD1Q14C86 1478 aa31.77■■■□□ 2.68
C12orf43-206ENST00000537817 GRIN2BQ13224 1484 aa31.76■■■□□ 2.67
C12orf43-206ENST00000537817 SNAPC4Q5SXM2 1469 aa31.66■■■□□ 2.66
C12orf43-206ENST00000537817 MAGI1Q96QZ7 1491 aaPredicted RBP31.65■■■□□ 2.66
C12orf43-206ENST00000537817 PBRM1Q86U86 1689 aa31.57■■■□□ 2.65
C12orf43-206ENST00000537817 TRIM41Q8WV44 630 aa31.57■■■□□ 2.64
C12orf43-206ENST00000537817 ERICH3Q5RHP9 1530 aa31.56■■■□□ 2.64
C12orf43-206ENST00000537817 KIF27Q86VH2 1401 aa31.56■■■□□ 2.64
C12orf43-206ENST00000537817 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
C12orf43-206ENST00000537817 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
C12orf43-206ENST00000537817 FHAD1B1AJZ9 1412 aa31.45■■■□□ 2.63
C12orf43-206ENST00000537817 ADAMTS12P58397 1594 aa31.45■■■□□ 2.63
C12orf43-206ENST00000537817 FBLN2P98095 1184 aa31.45■■■□□ 2.63
C12orf43-206ENST00000537817 CHMP7Q8WUX9 453 aaPredicted RBP31.45■■■□□ 2.63
C12orf43-206ENST00000537817 IGF1RP08069 1367 aa31.43■■■□□ 2.62
C12orf43-206ENST00000537817 CHD1O14646 1710 aa31.42■■■□□ 2.62
C12orf43-206ENST00000537817 CHIC1Q5VXU3 224 aa31.38■■■□□ 2.61
C12orf43-206ENST00000537817 GRIN2AQ12879 1464 aa31.34■■■□□ 2.61
C12orf43-206ENST00000537817 RUSC2Q8N2Y8 1516 aa31.31■■■□□ 2.6
C12orf43-206ENST00000537817 CUL7Q14999 1698 aa31.25■■■□□ 2.59
C12orf43-206ENST00000537817 NUP160Q12769 1436 aa31.24■■■□□ 2.59
C12orf43-206ENST00000537817 CLASP1Q7Z460 1538 aa31.24■■■□□ 2.59
C12orf43-206ENST00000537817 CARMIL1Q5VZK9 1371 aa31.22■■■□□ 2.59
C12orf43-206ENST00000537817 CEP170Q5SW79 1584 aa31.15■■■□□ 2.58
C12orf43-206ENST00000537817 EEA1Q15075 1411 aa31.13■■■□□ 2.57
C12orf43-206ENST00000537817 RAPGEF2Q9Y4G8 1499 aa31.06■■■□□ 2.56
C12orf43-206ENST00000537817 PRXQ9BXM0 1461 aa31.05■■■□□ 2.56
C12orf43-206ENST00000537817 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
C12orf43-206ENST00000537817 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
C12orf43-206ENST00000537817 KIAA0586Q9BVV6 1533 aa30.98■■■□□ 2.55
C12orf43-206ENST00000537817 RIMBP3CA6NJZ7 1639 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms