RNA–Protein interactions for RNA: ENST00000537756.2

CPT1A-203, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-203ENST00000537756 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
CPT1A-203ENST00000537756 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.82
CPT1A-203ENST00000537756 ABCC9O60706 1549 aa25.73■■□□□ 1.71
CPT1A-203ENST00000537756 NACADO15069 1562 aa24.87■■□□□ 1.57
CPT1A-203ENST00000537756 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
CPT1A-203ENST00000537756 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
CPT1A-203ENST00000537756 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
CPT1A-203ENST00000537756 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
CPT1A-203ENST00000537756 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
CPT1A-203ENST00000537756 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
CPT1A-203ENST00000537756 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
CPT1A-203ENST00000537756 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
CPT1A-203ENST00000537756 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
CPT1A-203ENST00000537756 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
CPT1A-203ENST00000537756 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
CPT1A-203ENST00000537756 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
CPT1A-203ENST00000537756 CC2D2AQ9P2K1 1620 aa23.3■■□□□ 1.32
CPT1A-203ENST00000537756 CECR2Q9BXF3 1484 aa23.19■■□□□ 1.3
CPT1A-203ENST00000537756 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
CPT1A-203ENST00000537756 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
CPT1A-203ENST00000537756 SMARCA4P51532 1647 aa22.99■■□□□ 1.27
CPT1A-203ENST00000537756 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
CPT1A-203ENST00000537756 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
CPT1A-203ENST00000537756 PEG3Q9GZU2 1588 aa22.87■■□□□ 1.25
CPT1A-203ENST00000537756 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
CPT1A-203ENST00000537756 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
CPT1A-203ENST00000537756 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
CPT1A-203ENST00000537756 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
CPT1A-203ENST00000537756 WIZO95785 1651 aa22.52■■□□□ 1.2
CPT1A-203ENST00000537756 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
CPT1A-203ENST00000537756 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
CPT1A-203ENST00000537756 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
CPT1A-203ENST00000537756 NESP48681 1621 aa22.26■■□□□ 1.15
CPT1A-203ENST00000537756 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
CPT1A-203ENST00000537756 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
CPT1A-203ENST00000537756 CFTRP13569 1480 aa22.15■■□□□ 1.14
CPT1A-203ENST00000537756 CCDC88BA6NC98 1476 aa22.11■■□□□ 1.13
CPT1A-203ENST00000537756 CUX2O14529 1486 aa22.09■■□□□ 1.13
CPT1A-203ENST00000537756 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
CPT1A-203ENST00000537756 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
CPT1A-203ENST00000537756 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
CPT1A-203ENST00000537756 THOC2Q8NI27 1593 aaKnown RBP21.94■■□□□ 1.1
CPT1A-203ENST00000537756 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
CPT1A-203ENST00000537756 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
CPT1A-203ENST00000537756 WDR62O43379 1518 aa21.84■■□□□ 1.09
CPT1A-203ENST00000537756 PRDM2Q13029 1718 aa21.83■■□□□ 1.09
CPT1A-203ENST00000537756 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
CPT1A-203ENST00000537756 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
CPT1A-203ENST00000537756 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
CPT1A-203ENST00000537756 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
CPT1A-203ENST00000537756 IFT140Q96RY7 1462 aa21.52■■□□□ 1.04
CPT1A-203ENST00000537756 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
CPT1A-203ENST00000537756 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
CPT1A-203ENST00000537756 CUX1P39880 1505 aa21.41■■□□□ 1.02
CPT1A-203ENST00000537756 SOGA1O94964 1423 aa21.38■■□□□ 1.01
CPT1A-203ENST00000537756 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
CPT1A-203ENST00000537756 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
CPT1A-203ENST00000537756 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1
CPT1A-203ENST00000537756 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
CPT1A-203ENST00000537756 WDR97A6NE52 1622 aa21.29■■□□□ 1
CPT1A-203ENST00000537756 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
CPT1A-203ENST00000537756 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
CPT1A-203ENST00000537756 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.99
CPT1A-203ENST00000537756 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
CPT1A-203ENST00000537756 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
CPT1A-203ENST00000537756 ABCA10Q8WWZ4 1543 aa21.21■□□□□ 0.99
CPT1A-203ENST00000537756 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
CPT1A-203ENST00000537756 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
CPT1A-203ENST00000537756 SYNJ1O43426 1573 aa21.18■□□□□ 0.98
CPT1A-203ENST00000537756 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
CPT1A-203ENST00000537756 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
CPT1A-203ENST00000537756 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.97
CPT1A-203ENST00000537756 ABCA5Q8WWZ7 1642 aa21.05■□□□□ 0.96
CPT1A-203ENST00000537756 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
CPT1A-203ENST00000537756 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
CPT1A-203ENST00000537756 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
CPT1A-203ENST00000537756 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
CPT1A-203ENST00000537756 FBLN2P98095 1184 aa20.95■□□□□ 0.94
CPT1A-203ENST00000537756 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
CPT1A-203ENST00000537756 CHD1O14646 1710 aa20.9■□□□□ 0.94
CPT1A-203ENST00000537756 FHAD1B1AJZ9 1412 aa20.9■□□□□ 0.94
CPT1A-203ENST00000537756 KIF27Q86VH2 1401 aa20.9■□□□□ 0.94
CPT1A-203ENST00000537756 IGF1RP08069 1367 aa20.85■□□□□ 0.93
CPT1A-203ENST00000537756 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
CPT1A-203ENST00000537756 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
CPT1A-203ENST00000537756 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
CPT1A-203ENST00000537756 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
CPT1A-203ENST00000537756 NUP160Q12769 1436 aa20.78■□□□□ 0.92
CPT1A-203ENST00000537756 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
CPT1A-203ENST00000537756 CUL7Q14999 1698 aa20.71■□□□□ 0.91
CPT1A-203ENST00000537756 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
CPT1A-203ENST00000537756 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
CPT1A-203ENST00000537756 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
CPT1A-203ENST00000537756 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
CPT1A-203ENST00000537756 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
CPT1A-203ENST00000537756 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
CPT1A-203ENST00000537756 KIAA0586Q9BVV6 1533 aa20.59■□□□□ 0.89
CPT1A-203ENST00000537756 JPH4Q96JJ6 628 aa20.59■□□□□ 0.89
CPT1A-203ENST00000537756 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
CPT1A-203ENST00000537756 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms