RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 NISCHQ9Y2I1 1504 aa40.55■■■■■ 4.08
ATN1-203ENST00000537488 CCDC180Q9P1Z9 1646 aa36.16■■■■□ 3.38
ATN1-203ENST00000537488 ABCC9O60706 1549 aa35.86■■■■□ 3.33
ATN1-203ENST00000537488 RB1CC1Q8TDY2 1594 aa34.2■■■■□ 3.07
ATN1-203ENST00000537488 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
ATN1-203ENST00000537488 NACADO15069 1562 aa34.05■■■■□ 3.04
ATN1-203ENST00000537488 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
ATN1-203ENST00000537488 MYO15BQ96JP2 1530 aa33.65■■■□□ 2.98
ATN1-203ENST00000537488 UNC13AQ9UPW8 1703 aa33.62■■■□□ 2.97
ATN1-203ENST00000537488 PABPN1Q86U42 306 aaKnown RBP eCLIP33.49■■■□□ 2.95
ATN1-203ENST00000537488 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
ATN1-203ENST00000537488 DNAJC5BQ9UF47 199 aa33.32■■■□□ 2.92
ATN1-203ENST00000537488 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
ATN1-203ENST00000537488 SCRIBQ14160 1630 aa33.1■■■□□ 2.89
ATN1-203ENST00000537488 SHROOM4Q9ULL8 1493 aa32.65■■■□□ 2.82
ATN1-203ENST00000537488 EIF4G1Q04637 1599 aaKnown RBP32.4■■■□□ 2.78
ATN1-203ENST00000537488 CC2D2AQ9P2K1 1620 aa32.4■■■□□ 2.78
ATN1-203ENST00000537488 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
ATN1-203ENST00000537488 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
ATN1-203ENST00000537488 ATAD2BQ9ULI0 1458 aa31.46■■■□□ 2.63
ATN1-203ENST00000537488 NCAPD3P42695 1498 aa31.44■■■□□ 2.62
ATN1-203ENST00000537488 BAZ1AQ9NRL2 1556 aaPredicted RBP31.4■■■□□ 2.62
ATN1-203ENST00000537488 SMARCA2P51531 1590 aa31.33■■■□□ 2.61
ATN1-203ENST00000537488 MROH2BQ7Z745 1585 aa31.32■■■□□ 2.6
ATN1-203ENST00000537488 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
ATN1-203ENST00000537488 PEG3Q9GZU2 1588 aa31.18■■■□□ 2.58
ATN1-203ENST00000537488 BAZ1BQ9UIG0 1483 aaKnown RBP31.16■■■□□ 2.58
ATN1-203ENST00000537488 WIZO95785 1651 aa31.01■■■□□ 2.55
ATN1-203ENST00000537488 NESP48681 1621 aa30.97■■■□□ 2.55
ATN1-203ENST00000537488 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
ATN1-203ENST00000537488 RSF1Q96T23 1441 aaPredicted RBP30.78■■■□□ 2.52
ATN1-203ENST00000537488 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
ATN1-203ENST00000537488 KIF21AQ7Z4S6 1674 aa30.58■■■□□ 2.49
ATN1-203ENST00000537488 CUX2O14529 1486 aa30.57■■■□□ 2.48
ATN1-203ENST00000537488 TOP2AP11388 1531 aaKnown RBP30.53■■■□□ 2.48
ATN1-203ENST00000537488 CADPSQ9ULU8 1353 aa30.53■■■□□ 2.48
ATN1-203ENST00000537488 THOC2Q8NI27 1593 aaKnown RBP30.5■■■□□ 2.47
ATN1-203ENST00000537488 PDS5BQ9NTI5 1447 aa30.44■■■□□ 2.46
ATN1-203ENST00000537488 CFTRP13569 1480 aa30.27■■■□□ 2.44
ATN1-203ENST00000537488 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
ATN1-203ENST00000537488 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
ATN1-203ENST00000537488 FANCD2Q9BXW9 1451 aa30.2■■■□□ 2.43
ATN1-203ENST00000537488 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
ATN1-203ENST00000537488 DNAJC5Q9H3Z4 198 aa30.14■■■□□ 2.42
ATN1-203ENST00000537488 WDR62O43379 1518 aa30.12■■■□□ 2.41
ATN1-203ENST00000537488 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
ATN1-203ENST00000537488 URB2Q14146 1524 aaKnown RBP29.98■■■□□ 2.39
ATN1-203ENST00000537488 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
ATN1-203ENST00000537488 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
ATN1-203ENST00000537488 DNMBPQ6XZF7 1577 aa29.6■■■□□ 2.33
ATN1-203ENST00000537488 ZNF608Q9ULD9 1512 aaPredicted RBP29.57■■■□□ 2.32
ATN1-203ENST00000537488 ABCC8Q09428 1581 aa29.53■■■□□ 2.32
ATN1-203ENST00000537488 IFT140Q96RY7 1462 aa29.53■■■□□ 2.32
ATN1-203ENST00000537488 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
ATN1-203ENST00000537488 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
ATN1-203ENST00000537488 CUX1P39880 1505 aa29.39■■■□□ 2.3
ATN1-203ENST00000537488 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.29
ATN1-203ENST00000537488 RAD54L2Q9Y4B4 1467 aa29.38■■■□□ 2.29
ATN1-203ENST00000537488 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.294e-6■□□□□ 10.2
ATN1-203ENST00000537488 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
ATN1-203ENST00000537488 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
ATN1-203ENST00000537488 SOGA1O94964 1423 aa29.28■■■□□ 2.28
ATN1-203ENST00000537488 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
ATN1-203ENST00000537488 CHD1O14646 1710 aa29.16■■■□□ 2.26
ATN1-203ENST00000537488 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
ATN1-203ENST00000537488 TRIM41Q8WV44 630 aa29.09■■■□□ 2.25
ATN1-203ENST00000537488 FBLN2P98095 1184 aa29.04■■■□□ 2.24
ATN1-203ENST00000537488 SYNJ1O43426 1573 aa29.04■■■□□ 2.24
ATN1-203ENST00000537488 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
ATN1-203ENST00000537488 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
ATN1-203ENST00000537488 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.23
ATN1-203ENST00000537488 TOP2BQ02880 1626 aa28.98■■■□□ 2.23
ATN1-203ENST00000537488 PBRM1Q86U86 1689 aa28.97■■■□□ 2.23
ATN1-203ENST00000537488 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
ATN1-203ENST00000537488 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
ATN1-203ENST00000537488 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
ATN1-203ENST00000537488 ABCA10Q8WWZ4 1543 aa28.95■■■□□ 2.23
ATN1-203ENST00000537488 GRIN2BQ13224 1484 aa28.95■■■□□ 2.22
ATN1-203ENST00000537488 GAPVD1Q14C86 1478 aa28.93■■■□□ 2.22
ATN1-203ENST00000537488 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
ATN1-203ENST00000537488 MAGI1Q96QZ7 1491 aaPredicted RBP28.87■■■□□ 2.21
ATN1-203ENST00000537488 ARHGEF11O15085 1522 aa28.87■■■□□ 2.21
ATN1-203ENST00000537488 CHMP7Q8WUX9 453 aaPredicted RBP28.84■■■□□ 2.21
ATN1-203ENST00000537488 SYNJ2O15056 1496 aa28.79■■■□□ 2.2
ATN1-203ENST00000537488 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
ATN1-203ENST00000537488 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
ATN1-203ENST00000537488 CYB5RLQ6IPT4 315 aa28.66■■■□□ 2.18
ATN1-203ENST00000537488 ARAP1Q96P48 1450 aa28.65■■■□□ 2.18
ATN1-203ENST00000537488 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
ATN1-203ENST00000537488 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
ATN1-203ENST00000537488 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
ATN1-203ENST00000537488 FHAD1B1AJZ9 1412 aa28.54■■■□□ 2.16
ATN1-203ENST00000537488 NUP160Q12769 1436 aa28.47■■■□□ 2.15
ATN1-203ENST00000537488 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.14
ATN1-203ENST00000537488 IGF1RP08069 1367 aa28.37■■■□□ 2.13
ATN1-203ENST00000537488 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
ATN1-203ENST00000537488 SHROOM2Q13796 1616 aa28.33■■■□□ 2.13
ATN1-203ENST00000537488 CUL7Q14999 1698 aa28.26■■■□□ 2.12
ATN1-203ENST00000537488 RUSC2Q8N2Y8 1516 aa28.25■■■□□ 2.11
ATN1-203ENST00000537488 JPH4Q96JJ6 628 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms