RNA–Protein interactions for RNA: ENST00000537454.6

APLP1-202, Transcript of amyloid beta precursor like protein 1, humanhuman

TSL 2 BASIC

Gene APLP1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP1-202ENST00000537454 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
APLP1-202ENST00000537454 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
APLP1-202ENST00000537454 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
APLP1-202ENST00000537454 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
APLP1-202ENST00000537454 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
APLP1-202ENST00000537454 ABCC9O60706 1549 aa29.23■■■□□ 2.27
APLP1-202ENST00000537454 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
APLP1-202ENST00000537454 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
APLP1-202ENST00000537454 NACADO15069 1562 aa28.89■■■□□ 2.22
APLP1-202ENST00000537454 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
APLP1-202ENST00000537454 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
APLP1-202ENST00000537454 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
APLP1-202ENST00000537454 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
APLP1-202ENST00000537454 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
APLP1-202ENST00000537454 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
APLP1-202ENST00000537454 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
APLP1-202ENST00000537454 PABPN1Q86U42 306 aaKnown RBP eCLIP27.6■■■□□ 2.01
APLP1-202ENST00000537454 BAZ1AQ9NRL2 1556 aaPredicted RBP27.5■■□□□ 1.99
APLP1-202ENST00000537454 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
APLP1-202ENST00000537454 SMARCA4P51532 1647 aa27.35■■□□□ 1.97
APLP1-202ENST00000537454 WIZO95785 1651 aa27.28■■□□□ 1.96
APLP1-202ENST00000537454 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
APLP1-202ENST00000537454 TOP2AP11388 1531 aaKnown RBP27.01■■□□□ 1.91
APLP1-202ENST00000537454 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
APLP1-202ENST00000537454 SMARCA2P51531 1590 aa26.89■■□□□ 1.9
APLP1-202ENST00000537454 ATAD2BQ9ULI0 1458 aa26.89■■□□□ 1.9
APLP1-202ENST00000537454 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.89
APLP1-202ENST00000537454 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
APLP1-202ENST00000537454 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
APLP1-202ENST00000537454 NCAPD3P42695 1498 aa26.67■■□□□ 1.86
APLP1-202ENST00000537454 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
APLP1-202ENST00000537454 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
APLP1-202ENST00000537454 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
APLP1-202ENST00000537454 ABCC8Q09428 1581 aa26.17■■□□□ 1.78
APLP1-202ENST00000537454 CFTRP13569 1480 aa26.09■■□□□ 1.77
APLP1-202ENST00000537454 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
APLP1-202ENST00000537454 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
APLP1-202ENST00000537454 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
APLP1-202ENST00000537454 SYNJ1O43426 1573 aa25.89■■□□□ 1.74
APLP1-202ENST00000537454 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
APLP1-202ENST00000537454 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
APLP1-202ENST00000537454 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
APLP1-202ENST00000537454 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
APLP1-202ENST00000537454 EEA1Q15075 1411 aa25.75■■□□□ 1.71
APLP1-202ENST00000537454 DNAJC5BQ9UF47 199 aa25.74■■□□□ 1.71
APLP1-202ENST00000537454 LAMC3Q9Y6N6 1575 aa25.74■■□□□ 1.71
APLP1-202ENST00000537454 SOGA1O94964 1423 aa25.72■■□□□ 1.71
APLP1-202ENST00000537454 CUX1P39880 1505 aa25.7■■□□□ 1.7
APLP1-202ENST00000537454 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
APLP1-202ENST00000537454 NESP48681 1621 aa25.68■■□□□ 1.7
APLP1-202ENST00000537454 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
APLP1-202ENST00000537454 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
APLP1-202ENST00000537454 PDS5BQ9NTI5 1447 aa25.56■■□□□ 1.68
APLP1-202ENST00000537454 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
APLP1-202ENST00000537454 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
APLP1-202ENST00000537454 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
APLP1-202ENST00000537454 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
APLP1-202ENST00000537454 TOPBP1Q92547 1522 aa25.41■■□□□ 1.66
APLP1-202ENST00000537454 KIF27Q86VH2 1401 aa25.39■■□□□ 1.66
APLP1-202ENST00000537454 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
APLP1-202ENST00000537454 KIF21BO75037 1637 aa25.37■■□□□ 1.65
APLP1-202ENST00000537454 GOLGA3Q08378 1498 aa25.36■■□□□ 1.65
APLP1-202ENST00000537454 URB2Q14146 1524 aaKnown RBP25.34■■□□□ 1.65
APLP1-202ENST00000537454 TNIKQ9UKE5 1360 aa25.32■■□□□ 1.64
APLP1-202ENST00000537454 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
APLP1-202ENST00000537454 CUX2O14529 1486 aa25.28■■□□□ 1.64
APLP1-202ENST00000537454 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
APLP1-202ENST00000537454 PRXQ9BXM0 1461 aa25.23■■□□□ 1.63
APLP1-202ENST00000537454 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
APLP1-202ENST00000537454 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
APLP1-202ENST00000537454 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
APLP1-202ENST00000537454 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
APLP1-202ENST00000537454 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
APLP1-202ENST00000537454 IGF1RP08069 1367 aa25.16■■□□□ 1.62
APLP1-202ENST00000537454 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
APLP1-202ENST00000537454 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
APLP1-202ENST00000537454 ERCC6Q03468 1493 aa25.08■■□□□ 1.6
APLP1-202ENST00000537454 WDR62O43379 1518 aa25.05■■□□□ 1.6
APLP1-202ENST00000537454 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
APLP1-202ENST00000537454 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
APLP1-202ENST00000537454 ABCA5Q8WWZ7 1642 aa24.98■■□□□ 1.59
APLP1-202ENST00000537454 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
APLP1-202ENST00000537454 CLIP1P30622 1438 aa24.96■■□□□ 1.59
APLP1-202ENST00000537454 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
APLP1-202ENST00000537454 CUL7Q14999 1698 aa24.94■■□□□ 1.58
APLP1-202ENST00000537454 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
APLP1-202ENST00000537454 IFT140Q96RY7 1462 aa24.92■■□□□ 1.58
APLP1-202ENST00000537454 TRIM26Q12899 539 aaPredicted RBP24.81■■□□□ 1.56
APLP1-202ENST00000537454 AQRO60306 1485 aaKnown RBP eCLIP24.78■■□□□ 1.56
APLP1-202ENST00000537454 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
APLP1-202ENST00000537454 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
APLP1-202ENST00000537454 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
APLP1-202ENST00000537454 VPS8Q8N3P4 1428 aa24.75■■□□□ 1.55
APLP1-202ENST00000537454 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
APLP1-202ENST00000537454 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
APLP1-202ENST00000537454 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
APLP1-202ENST00000537454 ARAP1Q96P48 1450 aa24.67■■□□□ 1.54
APLP1-202ENST00000537454 ARHGAP35Q9NRY4 1499 aa24.67■■□□□ 1.54
APLP1-202ENST00000537454 CTTNBP2Q8WZ74 1663 aa24.67■■□□□ 1.54
APLP1-202ENST00000537454 EIF4G3O43432 1585 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms