RNA–Protein interactions for RNA: ENST00000537350.5

RCSD1-206, Transcript of RCSD domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RCSD1, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCSD1-206ENST00000537350 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
RCSD1-206ENST00000537350 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
RCSD1-206ENST00000537350 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
RCSD1-206ENST00000537350 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
RCSD1-206ENST00000537350 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
RCSD1-206ENST00000537350 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
RCSD1-206ENST00000537350 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
RCSD1-206ENST00000537350 ABCC9O60706 1549 aa26.02■■□□□ 1.76
RCSD1-206ENST00000537350 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
RCSD1-206ENST00000537350 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
RCSD1-206ENST00000537350 SCRIBQ14160 1630 aa25.58■■□□□ 1.68
RCSD1-206ENST00000537350 NACADO15069 1562 aa25.46■■□□□ 1.67
RCSD1-206ENST00000537350 HRCP23327 699 aa25.31■■□□□ 1.64
RCSD1-206ENST00000537350 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
RCSD1-206ENST00000537350 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.63
RCSD1-206ENST00000537350 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
RCSD1-206ENST00000537350 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
RCSD1-206ENST00000537350 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
RCSD1-206ENST00000537350 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
RCSD1-206ENST00000537350 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
RCSD1-206ENST00000537350 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
RCSD1-206ENST00000537350 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
RCSD1-206ENST00000537350 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
RCSD1-206ENST00000537350 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
RCSD1-206ENST00000537350 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
RCSD1-206ENST00000537350 WIZO95785 1651 aa24.56■■□□□ 1.52
RCSD1-206ENST00000537350 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
RCSD1-206ENST00000537350 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
RCSD1-206ENST00000537350 FAM9AQ8IZU1 332 aaPredicted RBP24.49■■□□□ 1.51
RCSD1-206ENST00000537350 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
RCSD1-206ENST00000537350 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
RCSD1-206ENST00000537350 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
RCSD1-206ENST00000537350 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.46
RCSD1-206ENST00000537350 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
RCSD1-206ENST00000537350 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
RCSD1-206ENST00000537350 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
RCSD1-206ENST00000537350 MYT1Q01538 1121 aa23.92■■□□□ 1.42
RCSD1-206ENST00000537350 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
RCSD1-206ENST00000537350 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
RCSD1-206ENST00000537350 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
RCSD1-206ENST00000537350 ABCC8Q09428 1581 aa23.8■■□□□ 1.4
RCSD1-206ENST00000537350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
RCSD1-206ENST00000537350 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
RCSD1-206ENST00000537350 SOGA1O94964 1423 aa23.6■■□□□ 1.37
RCSD1-206ENST00000537350 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
RCSD1-206ENST00000537350 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.37
RCSD1-206ENST00000537350 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
RCSD1-206ENST00000537350 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
RCSD1-206ENST00000537350 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
RCSD1-206ENST00000537350 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
RCSD1-206ENST00000537350 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
RCSD1-206ENST00000537350 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
RCSD1-206ENST00000537350 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
RCSD1-206ENST00000537350 EEA1Q15075 1411 aa23.45■■□□□ 1.34
RCSD1-206ENST00000537350 SCAF1Q9H7N4 1312 aaKnown RBP23.44■■□□□ 1.34
RCSD1-206ENST00000537350 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
RCSD1-206ENST00000537350 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
RCSD1-206ENST00000537350 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
RCSD1-206ENST00000537350 DIEXFQ68CQ4 756 aaKnown RBP23.25■■□□□ 1.31
RCSD1-206ENST00000537350 CFTRP13569 1480 aa23.21■■□□□ 1.31
RCSD1-206ENST00000537350 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
RCSD1-206ENST00000537350 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
RCSD1-206ENST00000537350 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
RCSD1-206ENST00000537350 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
RCSD1-206ENST00000537350 KIF21BO75037 1637 aa23.1■■□□□ 1.29
RCSD1-206ENST00000537350 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
RCSD1-206ENST00000537350 CLIP1P30622 1438 aa23.09■■□□□ 1.29
RCSD1-206ENST00000537350 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
RCSD1-206ENST00000537350 CUX1P39880 1505 aa23.06■■□□□ 1.28
RCSD1-206ENST00000537350 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
RCSD1-206ENST00000537350 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
RCSD1-206ENST00000537350 ZNF316A6NFI3 1004 aaPredicted RBP23.02■■□□□ 1.28
RCSD1-206ENST00000537350 CENPBP07199 599 aaPredicted RBP23■■□□□ 1.27
RCSD1-206ENST00000537350 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
RCSD1-206ENST00000537350 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
RCSD1-206ENST00000537350 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
RCSD1-206ENST00000537350 APLP2Q06481 763 aa22.97■■□□□ 1.27
RCSD1-206ENST00000537350 NESP48681 1621 aa22.96■■□□□ 1.27
RCSD1-206ENST00000537350 GTF3C3Q9Y5Q9 886 aa22.92■■□□□ 1.26
RCSD1-206ENST00000537350 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.26
RCSD1-206ENST00000537350 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
RCSD1-206ENST00000537350 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
RCSD1-206ENST00000537350 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
RCSD1-206ENST00000537350 CUX2O14529 1486 aa22.78■■□□□ 1.24
RCSD1-206ENST00000537350 YTHDC1Q96MU7 727 aaKnown RBP22.76■■□□□ 1.23
RCSD1-206ENST00000537350 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
RCSD1-206ENST00000537350 MIER1Q8N108 512 aa22.73■■□□□ 1.23
RCSD1-206ENST00000537350 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.23
RCSD1-206ENST00000537350 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
RCSD1-206ENST00000537350 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
RCSD1-206ENST00000537350 IGF1RP08069 1367 aa22.66■■□□□ 1.22
RCSD1-206ENST00000537350 LAMC3Q9Y6N6 1575 aa22.66■■□□□ 1.22
RCSD1-206ENST00000537350 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
RCSD1-206ENST00000537350 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
RCSD1-206ENST00000537350 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
RCSD1-206ENST00000537350 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
RCSD1-206ENST00000537350 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
RCSD1-206ENST00000537350 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.21
RCSD1-206ENST00000537350 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
RCSD1-206ENST00000537350 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms