RNA–Protein interactions for RNA: ENST00000537198.1

ARHGEF17-204, Transcript of Rho guanine nucleotide exchange factor 17, humanhuman

TSL 3

Gene ARHGEF17, Length 351 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF17-204ENST00000537198 NISCHQ9Y2I1 1504 aa21.73■■□□□ 1.07
ARHGEF17-204ENST00000537198 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
ARHGEF17-204ENST00000537198 ABCC9O60706 1549 aa18.74■□□□□ 0.59
ARHGEF17-204ENST00000537198 NACADO15069 1562 aa18.15■□□□□ 0.5
ARHGEF17-204ENST00000537198 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
ARHGEF17-204ENST00000537198 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
ARHGEF17-204ENST00000537198 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
ARHGEF17-204ENST00000537198 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
ARHGEF17-204ENST00000537198 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
ARHGEF17-204ENST00000537198 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
ARHGEF17-204ENST00000537198 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
ARHGEF17-204ENST00000537198 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
ARHGEF17-204ENST00000537198 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
ARHGEF17-204ENST00000537198 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
ARHGEF17-204ENST00000537198 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
ARHGEF17-204ENST00000537198 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
ARHGEF17-204ENST00000537198 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.31
ARHGEF17-204ENST00000537198 BAZ1AQ9NRL2 1556 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF17-204ENST00000537198 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
ARHGEF17-204ENST00000537198 SMARCA4P51532 1647 aa16.82■□□□□ 0.28
ARHGEF17-204ENST00000537198 SMARCA2P51531 1590 aa16.77■□□□□ 0.27
ARHGEF17-204ENST00000537198 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
ARHGEF17-204ENST00000537198 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
ARHGEF17-204ENST00000537198 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
ARHGEF17-204ENST00000537198 PEG3Q9GZU2 1588 aa16.7■□□□□ 0.26
ARHGEF17-204ENST00000537198 HMGXB3Q12766 1538 aa16.67■□□□□ 0.26
ARHGEF17-204ENST00000537198 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
ARHGEF17-204ENST00000537198 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF17-204ENST00000537198 WIZO95785 1651 aa16.5■□□□□ 0.23
ARHGEF17-204ENST00000537198 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
ARHGEF17-204ENST00000537198 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
ARHGEF17-204ENST00000537198 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
ARHGEF17-204ENST00000537198 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
ARHGEF17-204ENST00000537198 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
ARHGEF17-204ENST00000537198 NESP48681 1621 aa16.2■□□□□ 0.18
ARHGEF17-204ENST00000537198 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
ARHGEF17-204ENST00000537198 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
ARHGEF17-204ENST00000537198 CFTRP13569 1480 aa16.17■□□□□ 0.18
ARHGEF17-204ENST00000537198 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
ARHGEF17-204ENST00000537198 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
ARHGEF17-204ENST00000537198 CUX2O14529 1486 aa16.03■□□□□ 0.16
ARHGEF17-204ENST00000537198 KIF21AQ7Z4S6 1674 aa16.01■□□□□ 0.15
ARHGEF17-204ENST00000537198 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
ARHGEF17-204ENST00000537198 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
ARHGEF17-204ENST00000537198 THOC2Q8NI27 1593 aaKnown RBP15.98■□□□□ 0.15
ARHGEF17-204ENST00000537198 WDR62O43379 1518 aa15.93■□□□□ 0.14
ARHGEF17-204ENST00000537198 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
ARHGEF17-204ENST00000537198 DNAJC5Q9H3Z4 198 aa15.88■□□□□ 0.13
ARHGEF17-204ENST00000537198 URB2Q14146 1524 aaKnown RBP15.84■□□□□ 0.13
ARHGEF17-204ENST00000537198 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
ARHGEF17-204ENST00000537198 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
ARHGEF17-204ENST00000537198 IFT140Q96RY7 1462 aa15.71■□□□□ 0.11
ARHGEF17-204ENST00000537198 CUX1P39880 1505 aa15.67■□□□□ 0.1
ARHGEF17-204ENST00000537198 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF17-204ENST00000537198 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
ARHGEF17-204ENST00000537198 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
ARHGEF17-204ENST00000537198 SOGA1O94964 1423 aa15.62■□□□□ 0.09
ARHGEF17-204ENST00000537198 TOP2BQ02880 1626 aa15.6■□□□□ 0.09
ARHGEF17-204ENST00000537198 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
ARHGEF17-204ENST00000537198 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
ARHGEF17-204ENST00000537198 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
ARHGEF17-204ENST00000537198 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF17-204ENST00000537198 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
ARHGEF17-204ENST00000537198 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
ARHGEF17-204ENST00000537198 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
ARHGEF17-204ENST00000537198 ABCA10Q8WWZ4 1543 aa15.52■□□□□ 0.07
ARHGEF17-204ENST00000537198 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.07
ARHGEF17-204ENST00000537198 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
ARHGEF17-204ENST00000537198 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
ARHGEF17-204ENST00000537198 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
ARHGEF17-204ENST00000537198 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF17-204ENST00000537198 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
ARHGEF17-204ENST00000537198 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
ARHGEF17-204ENST00000537198 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
ARHGEF17-204ENST00000537198 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
ARHGEF17-204ENST00000537198 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
ARHGEF17-204ENST00000537198 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
ARHGEF17-204ENST00000537198 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
ARHGEF17-204ENST00000537198 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
ARHGEF17-204ENST00000537198 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF17-204ENST00000537198 FBLN2P98095 1184 aa15.32■□□□□ 0.04
ARHGEF17-204ENST00000537198 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
ARHGEF17-204ENST00000537198 ADAMTS12P58397 1594 aa15.25■□□□□ 0.03
ARHGEF17-204ENST00000537198 CHD1O14646 1710 aa15.24■□□□□ 0.03
ARHGEF17-204ENST00000537198 IGF1RP08069 1367 aa15.24■□□□□ 0.03
ARHGEF17-204ENST00000537198 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
ARHGEF17-204ENST00000537198 CUL7Q14999 1698 aa15.22■□□□□ 0.03
ARHGEF17-204ENST00000537198 CHIC1Q5VXU3 224 aa15.17■□□□□ 0.02
ARHGEF17-204ENST00000537198 EEA1Q15075 1411 aa15.17■□□□□ 0.02
ARHGEF17-204ENST00000537198 CARMIL1Q5VZK9 1371 aa15.16■□□□□ 0.02
ARHGEF17-204ENST00000537198 NUP160Q12769 1436 aa15.16■□□□□ 0.02
ARHGEF17-204ENST00000537198 CLASP1Q7Z460 1538 aa15.15■□□□□ 0.02
ARHGEF17-204ENST00000537198 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
ARHGEF17-204ENST00000537198 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
ARHGEF17-204ENST00000537198 CEP170Q5SW79 1584 aa15.09■□□□□ 0.01
ARHGEF17-204ENST00000537198 ARHGEF11O15085 1522 aa15.08■□□□□ 0.01
ARHGEF17-204ENST00000537198 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
ARHGEF17-204ENST00000537198 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
ARHGEF17-204ENST00000537198 PRXQ9BXM0 1461 aa15.05■□□□□ -0
ARHGEF17-204ENST00000537198 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms