RNA–Protein interactions for RNA: ENST00000536437.5

KDM2B-205, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-205ENST00000536437 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
KDM2B-205ENST00000536437 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
KDM2B-205ENST00000536437 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
KDM2B-205ENST00000536437 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
KDM2B-205ENST00000536437 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
KDM2B-205ENST00000536437 HRCP23327 699 aa24.6■■□□□ 1.53
KDM2B-205ENST00000536437 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
KDM2B-205ENST00000536437 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
KDM2B-205ENST00000536437 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
KDM2B-205ENST00000536437 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
KDM2B-205ENST00000536437 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
KDM2B-205ENST00000536437 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
KDM2B-205ENST00000536437 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
KDM2B-205ENST00000536437 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
KDM2B-205ENST00000536437 ABCC9O60706 1549 aa23.47■■□□□ 1.35
KDM2B-205ENST00000536437 ZEB1P37275 1124 aaPredicted RBP23.31■■□□□ 1.32
KDM2B-205ENST00000536437 RSF1Q96T23 1441 aaPredicted RBP23.3■■□□□ 1.32
KDM2B-205ENST00000536437 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
KDM2B-205ENST00000536437 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
KDM2B-205ENST00000536437 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
KDM2B-205ENST00000536437 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
KDM2B-205ENST00000536437 EHMT2Q96KQ7 1210 aa23.12■■□□□ 1.29
KDM2B-205ENST00000536437 SCAF1Q9H7N4 1312 aaKnown RBP23.02■■□□□ 1.28
KDM2B-205ENST00000536437 PELP1Q8IZL8 1130 aaKnown RBP22.96■■□□□ 1.27
KDM2B-205ENST00000536437 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
KDM2B-205ENST00000536437 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
KDM2B-205ENST00000536437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
KDM2B-205ENST00000536437 WIZO95785 1651 aa22.68■■□□□ 1.22
KDM2B-205ENST00000536437 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
KDM2B-205ENST00000536437 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
KDM2B-205ENST00000536437 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
KDM2B-205ENST00000536437 NACADO15069 1562 aa22.56■■□□□ 1.2
KDM2B-205ENST00000536437 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
KDM2B-205ENST00000536437 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
KDM2B-205ENST00000536437 TTBK1Q5TCY1 1321 aaPredicted RBP22.49■■□□□ 1.19
KDM2B-205ENST00000536437 DIEXFQ68CQ4 756 aaKnown RBP22.47■■□□□ 1.19
KDM2B-205ENST00000536437 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
KDM2B-205ENST00000536437 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
KDM2B-205ENST00000536437 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
KDM2B-205ENST00000536437 CENPBP07199 599 aaPredicted RBP22.36■■□□□ 1.17
KDM2B-205ENST00000536437 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
KDM2B-205ENST00000536437 CEP162Q5TB80 1403 aa22.34■■□□□ 1.17
KDM2B-205ENST00000536437 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
KDM2B-205ENST00000536437 SOGA1O94964 1423 aa22.25■■□□□ 1.15
KDM2B-205ENST00000536437 TNIKQ9UKE5 1360 aa22.21■■□□□ 1.15
KDM2B-205ENST00000536437 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
KDM2B-205ENST00000536437 ZNF316A6NFI3 1004 aaPredicted RBP22.16■■□□□ 1.14
KDM2B-205ENST00000536437 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
KDM2B-205ENST00000536437 RUSC2Q8N2Y8 1516 aa22.13■■□□□ 1.13
KDM2B-205ENST00000536437 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
KDM2B-205ENST00000536437 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
KDM2B-205ENST00000536437 YTHDC1Q96MU7 727 aaKnown RBP22.08■■□□□ 1.12
KDM2B-205ENST00000536437 EEA1Q15075 1411 aa22.06■■□□□ 1.12
KDM2B-205ENST00000536437 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
KDM2B-205ENST00000536437 HNRNPUL2Q1KMD3 747 aaKnown RBP21.98■■□□□ 1.11
KDM2B-205ENST00000536437 MIER1Q8N108 512 aa21.96■■□□□ 1.11
KDM2B-205ENST00000536437 UNC13AQ9UPW8 1703 aa21.89■■□□□ 1.09
KDM2B-205ENST00000536437 MYT1Q01538 1121 aa21.88■■□□□ 1.09
KDM2B-205ENST00000536437 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
KDM2B-205ENST00000536437 CLIP1P30622 1438 aa21.82■■□□□ 1.08
KDM2B-205ENST00000536437 KIF21BO75037 1637 aa21.79■■□□□ 1.08
KDM2B-205ENST00000536437 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
KDM2B-205ENST00000536437 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
KDM2B-205ENST00000536437 APLP2Q06481 763 aa21.71■■□□□ 1.07
KDM2B-205ENST00000536437 RANGAP1P46060 587 aaPredicted RBP21.7■■□□□ 1.07
KDM2B-205ENST00000536437 RAPGEF2Q9Y4G8 1499 aa21.67■■□□□ 1.06
KDM2B-205ENST00000536437 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
KDM2B-205ENST00000536437 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
KDM2B-205ENST00000536437 PEG3Q9GZU2 1588 aa21.6■■□□□ 1.05
KDM2B-205ENST00000536437 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
KDM2B-205ENST00000536437 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
KDM2B-205ENST00000536437 CLSPNQ9HAW4 1339 aa21.48■■□□□ 1.03
KDM2B-205ENST00000536437 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
KDM2B-205ENST00000536437 SUPT16HQ9Y5B9 1047 aaKnown RBP21.43■■□□□ 1.02
KDM2B-205ENST00000536437 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
KDM2B-205ENST00000536437 ARAP1Q96P48 1450 aa21.41■■□□□ 1.02
KDM2B-205ENST00000536437 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
KDM2B-205ENST00000536437 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
KDM2B-205ENST00000536437 PRXQ9BXM0 1461 aa21.33■■□□□ 1
KDM2B-205ENST00000536437 BIVM-ERCC5R4GMW8 1640 aa21.31■■□□□ 1
KDM2B-205ENST00000536437 RRBP1Q9P2E9 1410 aaKnown RBP21.3■■□□□ 1
KDM2B-205ENST00000536437 ITGAEP38570 1179 aa21.24■□□□□ 0.99
KDM2B-205ENST00000536437 CUX2O14529 1486 aa21.22■□□□□ 0.99
KDM2B-205ENST00000536437 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
KDM2B-205ENST00000536437 TSHZ2Q9NRE2 1034 aa21.21■□□□□ 0.99
KDM2B-205ENST00000536437 KCNH8Q96L42 1107 aa21.2■□□□□ 0.98
KDM2B-205ENST00000536437 CUX1P39880 1505 aa21.15■□□□□ 0.98
KDM2B-205ENST00000536437 ARHGAP35Q9NRY4 1499 aa21.14■□□□□ 0.98
KDM2B-205ENST00000536437 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
KDM2B-205ENST00000536437 RAB3GAP2Q9H2M9 1393 aa21.12■□□□□ 0.97
KDM2B-205ENST00000536437 MAPKBP1O60336 1514 aa21.1■□□□□ 0.97
KDM2B-205ENST00000536437 BCANQ96GW7 911 aa21.07■□□□□ 0.96
KDM2B-205ENST00000536437 DDX10Q13206 875 aaKnown RBP21.01■□□□□ 0.95
KDM2B-205ENST00000536437 ANP32EQ9BTT0 268 aa21■□□□□ 0.95
KDM2B-205ENST00000536437 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
KDM2B-205ENST00000536437 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
KDM2B-205ENST00000536437 FKBP8Q14318 412 aa20.98■□□□□ 0.95
KDM2B-205ENST00000536437 SIN3AQ96ST3 1273 aa20.98■□□□□ 0.95
KDM2B-205ENST00000536437 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
KDM2B-205ENST00000536437 PHLDB1Q86UU1 1377 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms