RNA–Protein interactions for RNA: ENST00000536343.5

MGRN1-204, Transcript of mahogunin ring finger 1, humanhuman

TSL 2

Gene MGRN1, Length 1,575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1-204ENST00000536343 NISCHQ9Y2I1 1504 aa37.62■■■■□ 3.61
MGRN1-204ENST00000536343 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
MGRN1-204ENST00000536343 ABCC9O60706 1549 aa32.68■■■□□ 2.82
MGRN1-204ENST00000536343 ZCCHC6Q5VYS8 1495 aaKnown RBP31.43■■■□□ 2.62
MGRN1-204ENST00000536343 DCAF8L2P0C7V8 631 aa31.39■■■□□ 2.62
MGRN1-204ENST00000536343 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
MGRN1-204ENST00000536343 NACADO15069 1562 aa31.36■■■□□ 2.61
MGRN1-204ENST00000536343 MYO15BQ96JP2 1530 aa31.18■■■□□ 2.58
MGRN1-204ENST00000536343 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
MGRN1-204ENST00000536343 UNC13AQ9UPW8 1703 aa30.93■■■□□ 2.54
MGRN1-204ENST00000536343 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
MGRN1-204ENST00000536343 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
MGRN1-204ENST00000536343 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
MGRN1-204ENST00000536343 SHROOM4Q9ULL8 1493 aa30.31■■■□□ 2.44
MGRN1-204ENST00000536343 DNAJC5BQ9UF47 199 aa30.08■■■□□ 2.41
MGRN1-204ENST00000536343 EIF4G1Q04637 1599 aaKnown RBP29.71■■■□□ 2.35
MGRN1-204ENST00000536343 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
MGRN1-204ENST00000536343 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
MGRN1-204ENST00000536343 SMARCA4P51532 1647 aa29.21■■■□□ 2.27
MGRN1-204ENST00000536343 BAZ1AQ9NRL2 1556 aaPredicted RBP29.1■■■□□ 2.25
MGRN1-204ENST00000536343 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
MGRN1-204ENST00000536343 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
MGRN1-204ENST00000536343 NCAPD3P42695 1498 aa28.96■■■□□ 2.23
MGRN1-204ENST00000536343 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
MGRN1-204ENST00000536343 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
MGRN1-204ENST00000536343 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
MGRN1-204ENST00000536343 SMARCA2P51531 1590 aa28.9■■■□□ 2.22
MGRN1-204ENST00000536343 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
MGRN1-204ENST00000536343 WIZO95785 1651 aa28.78■■■□□ 2.2
MGRN1-204ENST00000536343 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
MGRN1-204ENST00000536343 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
MGRN1-204ENST00000536343 NESP48681 1621 aa28.37■■■□□ 2.13
MGRN1-204ENST00000536343 LAMC3Q9Y6N6 1575 aa28.17■■■□□ 2.1
MGRN1-204ENST00000536343 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
MGRN1-204ENST00000536343 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
MGRN1-204ENST00000536343 KIF21AQ7Z4S6 1674 aa28.06■■■□□ 2.08
MGRN1-204ENST00000536343 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
MGRN1-204ENST00000536343 CFTRP13569 1480 aa27.98■■■□□ 2.07
MGRN1-204ENST00000536343 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
MGRN1-204ENST00000536343 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
MGRN1-204ENST00000536343 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
MGRN1-204ENST00000536343 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
MGRN1-204ENST00000536343 CUX2O14529 1486 aa27.76■■■□□ 2.03
MGRN1-204ENST00000536343 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
MGRN1-204ENST00000536343 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
MGRN1-204ENST00000536343 WDR62O43379 1518 aa27.65■■■□□ 2.02
MGRN1-204ENST00000536343 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
MGRN1-204ENST00000536343 TOPBP1Q92547 1522 aa27.39■■□□□ 1.98
MGRN1-204ENST00000536343 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
MGRN1-204ENST00000536343 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
MGRN1-204ENST00000536343 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
MGRN1-204ENST00000536343 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
MGRN1-204ENST00000536343 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
MGRN1-204ENST00000536343 CUX1P39880 1505 aa27.25■■□□□ 1.95
MGRN1-204ENST00000536343 POLA1P09884 1462 aaPredicted RBP27.16■■□□□ 1.94
MGRN1-204ENST00000536343 TARBP1Q13395 1621 aaKnown RBP27.15■■□□□ 1.94
MGRN1-204ENST00000536343 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.94
MGRN1-204ENST00000536343 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
MGRN1-204ENST00000536343 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
MGRN1-204ENST00000536343 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
MGRN1-204ENST00000536343 RAD54L2Q9Y4B4 1467 aa27.07■■□□□ 1.92
MGRN1-204ENST00000536343 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
MGRN1-204ENST00000536343 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
MGRN1-204ENST00000536343 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
MGRN1-204ENST00000536343 SOGA1O94964 1423 aa26.98■■□□□ 1.91
MGRN1-204ENST00000536343 WDR97A6NE52 1622 aa26.97■■□□□ 1.91
MGRN1-204ENST00000536343 AQRO60306 1485 aaKnown RBP eCLIP26.95■■□□□ 1.91e-6■■■■■ 36.1
MGRN1-204ENST00000536343 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
MGRN1-204ENST00000536343 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
MGRN1-204ENST00000536343 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
MGRN1-204ENST00000536343 ABCA5Q8WWZ7 1642 aa26.77■■□□□ 1.88
MGRN1-204ENST00000536343 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
MGRN1-204ENST00000536343 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
MGRN1-204ENST00000536343 CHD1O14646 1710 aa26.72■■□□□ 1.87
MGRN1-204ENST00000536343 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
MGRN1-204ENST00000536343 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
MGRN1-204ENST00000536343 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
MGRN1-204ENST00000536343 GRIN2BQ13224 1484 aa26.65■■□□□ 1.86
MGRN1-204ENST00000536343 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.86
MGRN1-204ENST00000536343 EEA1Q15075 1411 aa26.63■■□□□ 1.85
MGRN1-204ENST00000536343 MAGI1Q96QZ7 1491 aaPredicted RBP26.58■■□□□ 1.85
MGRN1-204ENST00000536343 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
MGRN1-204ENST00000536343 CSRNP3Q8WYN3 585 aa26.57■■□□□ 1.84
MGRN1-204ENST00000536343 IGF1RP08069 1367 aa26.49■■□□□ 1.83
MGRN1-204ENST00000536343 ADAMTS12P58397 1594 aa26.49■■□□□ 1.83
MGRN1-204ENST00000536343 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
MGRN1-204ENST00000536343 FBLN2P98095 1184 aa26.47■■□□□ 1.83
MGRN1-204ENST00000536343 ERICH3Q5RHP9 1530 aa26.46■■□□□ 1.83
MGRN1-204ENST00000536343 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
MGRN1-204ENST00000536343 EHMT2Q96KQ7 1210 aa26.39■■□□□ 1.82
MGRN1-204ENST00000536343 CLASP1Q7Z460 1538 aa26.38■■□□□ 1.81
MGRN1-204ENST00000536343 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
MGRN1-204ENST00000536343 GRIN2AQ12879 1464 aa26.35■■□□□ 1.81
MGRN1-204ENST00000536343 FHAD1B1AJZ9 1412 aa26.34■■□□□ 1.81
MGRN1-204ENST00000536343 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
MGRN1-204ENST00000536343 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
MGRN1-204ENST00000536343 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
MGRN1-204ENST00000536343 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
MGRN1-204ENST00000536343 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
MGRN1-204ENST00000536343 LOC105371045A0A1W2PR82 267 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms