RNA–Protein interactions for RNA: ENST00000536336.5

SPTY2D1-202, Transcript of SPT2 chromatin protein domain containing 1, humanhuman

TSL 2

Gene SPTY2D1, Length 2,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTY2D1-202ENST00000536336 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
SPTY2D1-202ENST00000536336 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
SPTY2D1-202ENST00000536336 ABCC9O60706 1549 aa25.24■■□□□ 1.63
SPTY2D1-202ENST00000536336 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
SPTY2D1-202ENST00000536336 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
SPTY2D1-202ENST00000536336 NACADO15069 1562 aa24.17■■□□□ 1.46
SPTY2D1-202ENST00000536336 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
SPTY2D1-202ENST00000536336 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
SPTY2D1-202ENST00000536336 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
SPTY2D1-202ENST00000536336 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
SPTY2D1-202ENST00000536336 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
SPTY2D1-202ENST00000536336 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
SPTY2D1-202ENST00000536336 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
SPTY2D1-202ENST00000536336 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
SPTY2D1-202ENST00000536336 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
SPTY2D1-202ENST00000536336 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
SPTY2D1-202ENST00000536336 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
SPTY2D1-202ENST00000536336 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
SPTY2D1-202ENST00000536336 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
SPTY2D1-202ENST00000536336 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
SPTY2D1-202ENST00000536336 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
SPTY2D1-202ENST00000536336 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
SPTY2D1-202ENST00000536336 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
SPTY2D1-202ENST00000536336 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
SPTY2D1-202ENST00000536336 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
SPTY2D1-202ENST00000536336 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
SPTY2D1-202ENST00000536336 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
SPTY2D1-202ENST00000536336 WIZO95785 1651 aa22.02■■□□□ 1.12
SPTY2D1-202ENST00000536336 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
SPTY2D1-202ENST00000536336 NESP48681 1621 aa21.81■■□□□ 1.08
SPTY2D1-202ENST00000536336 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
SPTY2D1-202ENST00000536336 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
SPTY2D1-202ENST00000536336 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
SPTY2D1-202ENST00000536336 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
SPTY2D1-202ENST00000536336 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
SPTY2D1-202ENST00000536336 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
SPTY2D1-202ENST00000536336 CUX2O14529 1486 aa21.53■■□□□ 1.04
SPTY2D1-202ENST00000536336 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
SPTY2D1-202ENST00000536336 CFTRP13569 1480 aa21.52■■□□□ 1.04
SPTY2D1-202ENST00000536336 THOC2Q8NI27 1593 aaKnown RBP21.47■■□□□ 1.03
SPTY2D1-202ENST00000536336 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
SPTY2D1-202ENST00000536336 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
SPTY2D1-202ENST00000536336 CEP164Q9UPV0 1460 aa21.41■■□□□ 1.02
SPTY2D1-202ENST00000536336 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
SPTY2D1-202ENST00000536336 PRDM2Q13029 1718 aa21.33■■□□□ 1.01
SPTY2D1-202ENST00000536336 WDR62O43379 1518 aa21.31■■□□□ 1
SPTY2D1-202ENST00000536336 URB2Q14146 1524 aaKnown RBP21.2■□□□□ 0.98
SPTY2D1-202ENST00000536336 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
SPTY2D1-202ENST00000536336 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
SPTY2D1-202ENST00000536336 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
SPTY2D1-202ENST00000536336 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
SPTY2D1-202ENST00000536336 IFT140Q96RY7 1462 aa20.95■□□□□ 0.94
SPTY2D1-202ENST00000536336 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
SPTY2D1-202ENST00000536336 CUX1P39880 1505 aa20.88■□□□□ 0.93
SPTY2D1-202ENST00000536336 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
SPTY2D1-202ENST00000536336 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
SPTY2D1-202ENST00000536336 TARBP1Q13395 1621 aaKnown RBP20.83■□□□□ 0.93
SPTY2D1-202ENST00000536336 SOGA1O94964 1423 aa20.82■□□□□ 0.92
SPTY2D1-202ENST00000536336 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
SPTY2D1-202ENST00000536336 EIF4G3O43432 1585 aaKnown RBP20.79■□□□□ 0.92
SPTY2D1-202ENST00000536336 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.91
SPTY2D1-202ENST00000536336 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
SPTY2D1-202ENST00000536336 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
SPTY2D1-202ENST00000536336 TOP2BQ02880 1626 aa20.69■□□□□ 0.9
SPTY2D1-202ENST00000536336 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
SPTY2D1-202ENST00000536336 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
SPTY2D1-202ENST00000536336 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
SPTY2D1-202ENST00000536336 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
SPTY2D1-202ENST00000536336 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
SPTY2D1-202ENST00000536336 FBLN2P98095 1184 aa20.58■□□□□ 0.88
SPTY2D1-202ENST00000536336 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
SPTY2D1-202ENST00000536336 GAPVD1Q14C86 1478 aa20.57■□□□□ 0.88
SPTY2D1-202ENST00000536336 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
SPTY2D1-202ENST00000536336 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
SPTY2D1-202ENST00000536336 CHD1O14646 1710 aa20.52■□□□□ 0.88
SPTY2D1-202ENST00000536336 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
SPTY2D1-202ENST00000536336 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
SPTY2D1-202ENST00000536336 CHMP7Q8WUX9 453 aaPredicted RBP20.49■□□□□ 0.87
SPTY2D1-202ENST00000536336 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
SPTY2D1-202ENST00000536336 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
SPTY2D1-202ENST00000536336 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
SPTY2D1-202ENST00000536336 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
SPTY2D1-202ENST00000536336 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
SPTY2D1-202ENST00000536336 RIMBP3CA6NJZ7 1639 aa20.31■□□□□ 0.84
SPTY2D1-202ENST00000536336 RIMBP3BA6NNM3 1639 aa20.31■□□□□ 0.84
SPTY2D1-202ENST00000536336 RIMBP3Q9UFD9 1639 aa20.31■□□□□ 0.84
SPTY2D1-202ENST00000536336 ARHGEF11O15085 1522 aa20.31■□□□□ 0.84
SPTY2D1-202ENST00000536336 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
SPTY2D1-202ENST00000536336 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
SPTY2D1-202ENST00000536336 CLASP1Q7Z460 1538 aa20.29■□□□□ 0.84
SPTY2D1-202ENST00000536336 IGF1RP08069 1367 aa20.23■□□□□ 0.83
SPTY2D1-202ENST00000536336 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
SPTY2D1-202ENST00000536336 NUP160Q12769 1436 aa20.2■□□□□ 0.82
SPTY2D1-202ENST00000536336 CUL7Q14999 1698 aa20.18■□□□□ 0.82
SPTY2D1-202ENST00000536336 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
SPTY2D1-202ENST00000536336 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
SPTY2D1-202ENST00000536336 CARMIL1Q5VZK9 1371 aa20.12■□□□□ 0.81
SPTY2D1-202ENST00000536336 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
SPTY2D1-202ENST00000536336 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
SPTY2D1-202ENST00000536336 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms