RNA–Protein interactions for RNA: ENST00000535979.5

CDK2AP1-203, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-203ENST00000535979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP34.63■■■■□ 3.131e-27■■■□□ 18
CDK2AP1-203ENST00000535979 RBFOX2O43251 390 aaKnown RBP eCLIP21.5■■□□□ 1.032e-21■■■■■ 42.2
CDK2AP1-203ENST00000535979 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.55■■■□□ 2.962e-19■■■■■ 31.5
CDK2AP1-203ENST00000535979 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.88■■□□□ 1.737e-17■■■■■ 137.9
CDK2AP1-203ENST00000535979 SF3B1O75533 1304 aaKnown RBP eCLIP30.87■■■□□ 2.532e-14■■■■■ 172.3
CDK2AP1-203ENST00000535979 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.78■■■□□ 2.045e-14■■■■■ 44.9
CDK2AP1-203ENST00000535979 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.68■■□□□ 1.73e-12■□□□□ 8.8
CDK2AP1-203ENST00000535979 LARP4Q71RC2 724 aaKnown RBP eCLIP25.63■■□□□ 1.692e-11■■□□□ 13
CDK2AP1-203ENST00000535979 DDX6P26196 483 aaKnown RBP eCLIP30.08■■■□□ 2.413e-10■■■■■ 34.6
CDK2AP1-203ENST00000535979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.16■■□□□ 1.462e-8■□□□□ 9.5
CDK2AP1-203ENST00000535979 PABPC4Q13310 644 aaKnown RBP eCLIP34.03■■■■□ 3.042e-8■□□□□ 10.9
CDK2AP1-203ENST00000535979 IGF2BP3O00425 579 aaKnown RBP eCLIP34.54■■■■□ 3.122e-8■■■■□ 25.1
CDK2AP1-203ENST00000535979 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP30.87■■■□□ 2.538e-8■■■■■ 30
CDK2AP1-203ENST00000535979 DDX3XO00571 662 aaKnown RBP eCLIP28.55■■■□□ 2.161e-7■■■□□ 15.6
CDK2AP1-203ENST00000535979 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.13■■■□□ 2.252e-7■■■□□ 15.8
CDK2AP1-203ENST00000535979 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP26.46■■□□□ 1.832e-7■■■■□ 19.6
CDK2AP1-203ENST00000535979 TIA1P31483 386 aaKnown RBP eCLIP25.8■■□□□ 1.724e-7■■■■■ 32.5
CDK2AP1-203ENST00000535979 NKRFO15226 690 aaKnown RBP eCLIP32.67■■■□□ 2.825e-7■■■□□ 18.8
CDK2AP1-203ENST00000535979 SF3B4Q15427 424 aaKnown RBP eCLIP25.68■■□□□ 1.78e-7■■■■■ 27.7
CDK2AP1-203ENST00000535979 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP30.61■■■□□ 2.492e-6■■■□□ 17.3
CDK2AP1-203ENST00000535979 FKBP4Q02790 459 aaKnown RBP eCLIP36.4■■■■□ 3.423e-6■■■■□ 26.7
CDK2AP1-203ENST00000535979 EFTUD2Q15029 972 aaKnown RBP eCLIP26.35■■□□□ 1.814e-6■■■■■ 30.4
CDK2AP1-203ENST00000535979 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.45■■■□□ 2.795e-6■■■■□ 20.4
CDK2AP1-203ENST00000535979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP45.82■■■■■ 4.926e-6■■■■□ 21.5
CDK2AP1-203ENST00000535979 SF3A3Q12874 501 aaKnown RBP eCLIP24.43■■□□□ 1.56e-6■□□□□ 10.9
CDK2AP1-203ENST00000535979 TIAL1Q01085 375 aaKnown RBP eCLIP26.79■■□□□ 1.886e-6■■■■□ 21
Retrieved 26 of 26 RNA–protein pairs in 6.8 ms