RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-208ENST00000535934 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
POLE-208ENST00000535934 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
POLE-208ENST00000535934 ABCC9O60706 1549 aa30.9■■■□□ 2.54
POLE-208ENST00000535934 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
POLE-208ENST00000535934 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
POLE-208ENST00000535934 NACADO15069 1562 aa29.3■■■□□ 2.28
POLE-208ENST00000535934 MYO15BQ96JP2 1530 aa29■■■□□ 2.23
POLE-208ENST00000535934 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
POLE-208ENST00000535934 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
POLE-208ENST00000535934 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
POLE-208ENST00000535934 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
POLE-208ENST00000535934 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
POLE-208ENST00000535934 BICRAQ9NZM4 1560 aa28.64■■■□□ 2.18
POLE-208ENST00000535934 SCRIBQ14160 1630 aa28.37■■■□□ 2.13
POLE-208ENST00000535934 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
POLE-208ENST00000535934 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
POLE-208ENST00000535934 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
POLE-208ENST00000535934 CECR2Q9BXF3 1484 aa27.77■■■□□ 2.04
POLE-208ENST00000535934 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
POLE-208ENST00000535934 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
POLE-208ENST00000535934 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
POLE-208ENST00000535934 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
POLE-208ENST00000535934 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
POLE-208ENST00000535934 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
POLE-208ENST00000535934 HMGXB3Q12766 1538 aa26.87■■□□□ 1.89
POLE-208ENST00000535934 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
POLE-208ENST00000535934 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
POLE-208ENST00000535934 NESP48681 1621 aa26.65■■□□□ 1.86
POLE-208ENST00000535934 ERCC6Q03468 1493 aa26.58■■□□□ 1.85
POLE-208ENST00000535934 WIZO95785 1651 aa26.54■■□□□ 1.84
POLE-208ENST00000535934 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
POLE-208ENST00000535934 CUX2O14529 1486 aa26.42■■□□□ 1.82
POLE-208ENST00000535934 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
POLE-208ENST00000535934 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
POLE-208ENST00000535934 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
POLE-208ENST00000535934 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
POLE-208ENST00000535934 DNAJC5Q9H3Z4 198 aa26.2■■□□□ 1.79
POLE-208ENST00000535934 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
POLE-208ENST00000535934 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
POLE-208ENST00000535934 CFTRP13569 1480 aa26.08■■□□□ 1.77
POLE-208ENST00000535934 MRC2Q9UBG0 1479 aa26.02■■□□□ 1.76
POLE-208ENST00000535934 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
POLE-208ENST00000535934 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
POLE-208ENST00000535934 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
POLE-208ENST00000535934 WDR62O43379 1518 aa25.93■■□□□ 1.74
POLE-208ENST00000535934 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
POLE-208ENST00000535934 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
POLE-208ENST00000535934 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
POLE-208ENST00000535934 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
POLE-208ENST00000535934 ZNF608Q9ULD9 1512 aaPredicted RBP25.46■■□□□ 1.67
POLE-208ENST00000535934 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
POLE-208ENST00000535934 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
POLE-208ENST00000535934 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
POLE-208ENST00000535934 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
POLE-208ENST00000535934 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
POLE-208ENST00000535934 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.649e-8■■■■■ 27
POLE-208ENST00000535934 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
POLE-208ENST00000535934 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
POLE-208ENST00000535934 CUX1P39880 1505 aa25.23■■□□□ 1.63
POLE-208ENST00000535934 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
POLE-208ENST00000535934 SOGA1O94964 1423 aa25.21■■□□□ 1.63
POLE-208ENST00000535934 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
POLE-208ENST00000535934 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
POLE-208ENST00000535934 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
POLE-208ENST00000535934 FBLN2P98095 1184 aa25.05■■□□□ 1.6
POLE-208ENST00000535934 CHD1O14646 1710 aa24.96■■□□□ 1.59
POLE-208ENST00000535934 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
POLE-208ENST00000535934 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
POLE-208ENST00000535934 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
POLE-208ENST00000535934 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
POLE-208ENST00000535934 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
POLE-208ENST00000535934 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
POLE-208ENST00000535934 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
POLE-208ENST00000535934 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
POLE-208ENST00000535934 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
POLE-208ENST00000535934 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
POLE-208ENST00000535934 CHMP7Q8WUX9 453 aaPredicted RBP24.88■■□□□ 1.57
POLE-208ENST00000535934 MAGI1Q96QZ7 1491 aaPredicted RBP24.87■■□□□ 1.57
POLE-208ENST00000535934 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
POLE-208ENST00000535934 TOP2BQ02880 1626 aa24.84■■□□□ 1.57
POLE-208ENST00000535934 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
POLE-208ENST00000535934 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
POLE-208ENST00000535934 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
POLE-208ENST00000535934 CYB5RLQ6IPT4 315 aa24.79■■□□□ 1.56
POLE-208ENST00000535934 PBRM1Q86U86 1689 aa24.76■■□□□ 1.55
POLE-208ENST00000535934 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
POLE-208ENST00000535934 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
POLE-208ENST00000535934 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
POLE-208ENST00000535934 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
POLE-208ENST00000535934 FHAD1B1AJZ9 1412 aa24.58■■□□□ 1.53
POLE-208ENST00000535934 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
POLE-208ENST00000535934 NUP160Q12769 1436 aa24.53■■□□□ 1.52
POLE-208ENST00000535934 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
POLE-208ENST00000535934 ERCC6L2Q5T890 1561 aa24.44■■□□□ 1.5
POLE-208ENST00000535934 IGF1RP08069 1367 aa24.44■■□□□ 1.5
POLE-208ENST00000535934 KIF27Q86VH2 1401 aa24.39■■□□□ 1.5
POLE-208ENST00000535934 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
POLE-208ENST00000535934 JPH4Q96JJ6 628 aa24.34■■□□□ 1.49
POLE-208ENST00000535934 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
POLE-208ENST00000535934 PRG4Q92954 1404 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms