RNA–Protein interactions for RNA: ENST00000535796.1

CDK2AP1-202, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2

Gene CDK2AP1, Length 344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-202ENST00000535796 NISCHQ9Y2I1 1504 aa50.35■■■■■ 5.65
CDK2AP1-202ENST00000535796 ABCC9O60706 1549 aa45.42■■■■■ 4.86
CDK2AP1-202ENST00000535796 CCDC180Q9P1Z9 1646 aa45.37■■■■■ 4.85
CDK2AP1-202ENST00000535796 RB1CC1Q8TDY2 1594 aa43.22■■■■■ 4.51
CDK2AP1-202ENST00000535796 NACADO15069 1562 aa42.86■■■■■ 4.45
CDK2AP1-202ENST00000535796 DNAJC5BQ9UF47 199 aa42.65■■■■■ 4.42
CDK2AP1-202ENST00000535796 DCAF8L2P0C7V8 631 aa42.5■■■■■ 4.39
CDK2AP1-202ENST00000535796 UNC13AQ9UPW8 1703 aa42.33■■■■■ 4.37
CDK2AP1-202ENST00000535796 PABPN1Q86U42 306 aaKnown RBP eCLIP42.19■■■■■ 4.34
CDK2AP1-202ENST00000535796 MYO15BQ96JP2 1530 aa42.19■■■■■ 4.34
CDK2AP1-202ENST00000535796 BICRAQ9NZM4 1560 aa41.93■■■■■ 4.3
CDK2AP1-202ENST00000535796 ZCCHC6Q5VYS8 1495 aaKnown RBP41.72■■■■■ 4.27
CDK2AP1-202ENST00000535796 DCAF1Q9Y4B6 1507 aa41.59■■■■■ 4.25
CDK2AP1-202ENST00000535796 SHROOM4Q9ULL8 1493 aa41.38■■■■■ 4.21
CDK2AP1-202ENST00000535796 SCRIBQ14160 1630 aa41.29■■■■■ 4.2
CDK2AP1-202ENST00000535796 CC2D2AQ9P2K1 1620 aa41.07■■■■■ 4.17
CDK2AP1-202ENST00000535796 CECR2Q9BXF3 1484 aa40.94■■■■■ 4.14
CDK2AP1-202ENST00000535796 EIF4G1Q04637 1599 aaKnown RBP40.94■■■■■ 4.14
CDK2AP1-202ENST00000535796 NCAPD3P42695 1498 aa39.51■■■■□ 3.92
CDK2AP1-202ENST00000535796 ATAD2BQ9ULI0 1458 aa39.38■■■■□ 3.9
CDK2AP1-202ENST00000535796 SMARCA4P51532 1647 aa39.37■■■■□ 3.89
CDK2AP1-202ENST00000535796 SMARCA2P51531 1590 aa39.32■■■■□ 3.88
CDK2AP1-202ENST00000535796 DNAJC5Q9H3Z4 198 aa39.31■■■■□ 3.88
CDK2AP1-202ENST00000535796 HMGXB3Q12766 1538 aa39.28■■■■□ 3.88
CDK2AP1-202ENST00000535796 ERCC6Q03468 1493 aa39.26■■■■□ 3.88
CDK2AP1-202ENST00000535796 CUX2O14529 1486 aa39.24■■■■□ 3.87
CDK2AP1-202ENST00000535796 BAZ1AQ9NRL2 1556 aaPredicted RBP39.13■■■■□ 3.85
CDK2AP1-202ENST00000535796 BAZ1BQ9UIG0 1483 aaKnown RBP39.03■■■■□ 3.84
CDK2AP1-202ENST00000535796 PEG3Q9GZU2 1588 aa38.97■■■■□ 3.83
CDK2AP1-202ENST00000535796 NESP48681 1621 aa38.96■■■■□ 3.83
CDK2AP1-202ENST00000535796 MROH2BQ7Z745 1585 aa38.78■■■■□ 3.8
CDK2AP1-202ENST00000535796 LAMC3Q9Y6N6 1575 aa38.73■■■■□ 3.79
CDK2AP1-202ENST00000535796 THOC2Q8NI27 1593 aaKnown RBP38.69■■■■□ 3.78
CDK2AP1-202ENST00000535796 KIF21AQ7Z4S6 1674 aa38.57■■■■□ 3.76
CDK2AP1-202ENST00000535796 PDS5BQ9NTI5 1447 aa38.45■■■■□ 3.75
CDK2AP1-202ENST00000535796 WIZO95785 1651 aa38.37■■■■□ 3.73
CDK2AP1-202ENST00000535796 CADPSQ9ULU8 1353 aa38.29■■■■□ 3.72
CDK2AP1-202ENST00000535796 MRC2Q9UBG0 1479 aa38.15■■■■□ 3.7
CDK2AP1-202ENST00000535796 WDR62O43379 1518 aa38.09■■■■□ 3.69
CDK2AP1-202ENST00000535796 CEP164Q9UPV0 1460 aa37.99■■■■□ 3.67
CDK2AP1-202ENST00000535796 FANCD2Q9BXW9 1451 aa37.9■■■■□ 3.66
CDK2AP1-202ENST00000535796 RSF1Q96T23 1441 aaPredicted RBP37.88■■■■□ 3.66
CDK2AP1-202ENST00000535796 TOP2AP11388 1531 aaKnown RBP37.87■■■■□ 3.65
CDK2AP1-202ENST00000535796 CFTRP13569 1480 aa37.84■■■■□ 3.65
CDK2AP1-202ENST00000535796 PRDM2Q13029 1718 aa37.64■■■■□ 3.62
CDK2AP1-202ENST00000535796 URB2Q14146 1524 aaKnown RBP37.6■■■■□ 3.61
CDK2AP1-202ENST00000535796 TRIM41Q8WV44 630 aa37.56■■■■□ 3.6
CDK2AP1-202ENST00000535796 CCDC88BA6NC98 1476 aa37.38■■■■□ 3.57
CDK2AP1-202ENST00000535796 OSCARQ8IYS5 282 aa37.34■■■■□ 3.57
CDK2AP1-202ENST00000535796 IFT140Q96RY7 1462 aa37.21■■■■□ 3.55
CDK2AP1-202ENST00000535796 TOPBP1Q92547 1522 aa37.18■■■■□ 3.54
CDK2AP1-202ENST00000535796 ZNF608Q9ULD9 1512 aaPredicted RBP37.15■■■■□ 3.54
CDK2AP1-202ENST00000535796 ABCC8Q09428 1581 aa37.08■■■■□ 3.53
CDK2AP1-202ENST00000535796 DNMBPQ6XZF7 1577 aa37.06■■■■□ 3.52
CDK2AP1-202ENST00000535796 EIF4G3O43432 1585 aaKnown RBP37.03■■■■□ 3.52
CDK2AP1-202ENST00000535796 RIMBP3CA6NJZ7 1639 aa36.99■■■■□ 3.51
CDK2AP1-202ENST00000535796 RIMBP3BA6NNM3 1639 aa36.99■■■■□ 3.51
CDK2AP1-202ENST00000535796 RIMBP3Q9UFD9 1639 aa36.99■■■■□ 3.51
CDK2AP1-202ENST00000535796 TARBP1Q13395 1621 aaKnown RBP36.88■■■■□ 3.49
CDK2AP1-202ENST00000535796 ARHGEF11O15085 1522 aa36.83■■■■□ 3.49
CDK2AP1-202ENST00000535796 CHD1O14646 1710 aa36.82■■■■□ 3.49
CDK2AP1-202ENST00000535796 POLA1P09884 1462 aaPredicted RBP36.78■■■■□ 3.48
CDK2AP1-202ENST00000535796 AQRO60306 1485 aaKnown RBP eCLIP36.77■■■■□ 3.48
CDK2AP1-202ENST00000535796 RAD54L2Q9Y4B4 1467 aa36.62■■■■□ 3.45
CDK2AP1-202ENST00000535796 SOGA1O94964 1423 aa36.57■■■■□ 3.44
CDK2AP1-202ENST00000535796 FBLN2P98095 1184 aa36.56■■■■□ 3.44
CDK2AP1-202ENST00000535796 FGD5Q6ZNL6 1462 aa36.54■■■■□ 3.44
CDK2AP1-202ENST00000535796 WDR97A6NE52 1622 aa36.53■■■■□ 3.44
CDK2AP1-202ENST00000535796 TDRD9Q8NDG6 1382 aaKnown RBP36.51■■■■□ 3.43
CDK2AP1-202ENST00000535796 CYB5RLQ6IPT4 315 aa36.48■■■■□ 3.43
CDK2AP1-202ENST00000535796 CUX1P39880 1505 aa36.47■■■■□ 3.43
CDK2AP1-202ENST00000535796 SNAPC4Q5SXM2 1469 aa36.44■■■■□ 3.42
CDK2AP1-202ENST00000535796 ARAP1Q96P48 1450 aa36.44■■■■□ 3.42
CDK2AP1-202ENST00000535796 MAGI1Q96QZ7 1491 aaPredicted RBP36.35■■■■□ 3.41
CDK2AP1-202ENST00000535796 CLASP1Q7Z460 1538 aa36.32■■■■□ 3.4
CDK2AP1-202ENST00000535796 SYNJ1O43426 1573 aa36.31■■■■□ 3.4
CDK2AP1-202ENST00000535796 GRIN2BQ13224 1484 aa36.31■■■■□ 3.4
CDK2AP1-202ENST00000535796 PBRM1Q86U86 1689 aa36.28■■■■□ 3.4
CDK2AP1-202ENST00000535796 CHMP7Q8WUX9 453 aaPredicted RBP36.26■■■■□ 3.4
CDK2AP1-202ENST00000535796 SYNJ2O15056 1496 aa36.22■■■■□ 3.39
CDK2AP1-202ENST00000535796 TRHP20396 242 aaPredicted RBP36.16■■■■□ 3.38
CDK2AP1-202ENST00000535796 GAPVD1Q14C86 1478 aa36.16■■■■□ 3.38
CDK2AP1-202ENST00000535796 ABCA5Q8WWZ7 1642 aa36.12■■■■□ 3.37
CDK2AP1-202ENST00000535796 ABCA10Q8WWZ4 1543 aa36.1■■■■□ 3.37
CDK2AP1-202ENST00000535796 SUPT5HO00267 1087 aaKnown RBP36.06■■■■□ 3.36
CDK2AP1-202ENST00000535796 BIVM-ERCC5R4GMW8 1640 aa35.9■■■■□ 3.34
CDK2AP1-202ENST00000535796 WRNQ14191 1432 aaPredicted RBP eCLIP35.9■■■■□ 3.34
CDK2AP1-202ENST00000535796 TOP2BQ02880 1626 aa35.87■■■■□ 3.33
CDK2AP1-202ENST00000535796 ADAMTS12P58397 1594 aa35.87■■■■□ 3.33
CDK2AP1-202ENST00000535796 GRIN2AQ12879 1464 aa35.86■■■■□ 3.33
CDK2AP1-202ENST00000535796 CEP170Q5SW79 1584 aa35.76■■■■□ 3.31
CDK2AP1-202ENST00000535796 NUP160Q12769 1436 aa35.72■■■■□ 3.31
CDK2AP1-202ENST00000535796 ERCC6L2Q5T890 1561 aa35.72■■■■□ 3.31
CDK2AP1-202ENST00000535796 FHAD1B1AJZ9 1412 aa35.68■■■■□ 3.3
CDK2AP1-202ENST00000535796 ERICH3Q5RHP9 1530 aa35.67■■■■□ 3.3
CDK2AP1-202ENST00000535796 SHROOM2Q13796 1616 aa35.65■■■■□ 3.3
CDK2AP1-202ENST00000535796 PRG4Q92954 1404 aaPredicted RBP35.38■■■■□ 3.25
CDK2AP1-202ENST00000535796 RUSC2Q8N2Y8 1516 aa35.37■■■■□ 3.25
CDK2AP1-202ENST00000535796 KIF13AQ9H1H9 1805 aa35.3■■■■□ 3.24
CDK2AP1-202ENST00000535796 JPH4Q96JJ6 628 aa35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms