RNA–Protein interactions for RNA: ENST00000535678.1

ACSL3-209, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-209ENST00000535678 NISCHQ9Y2I1 1504 aa49.65■■■■■ 5.54
ACSL3-209ENST00000535678 ABCC9O60706 1549 aa44.6■■■■■ 4.73
ACSL3-209ENST00000535678 CCDC180Q9P1Z9 1646 aa44.46■■■■■ 4.71
ACSL3-209ENST00000535678 RB1CC1Q8TDY2 1594 aa42.39■■■■■ 4.38
ACSL3-209ENST00000535678 NACADO15069 1562 aa42.1■■■■■ 4.33
ACSL3-209ENST00000535678 DCAF8L2P0C7V8 631 aa42.06■■■■■ 4.32
ACSL3-209ENST00000535678 DNAJC5BQ9UF47 199 aa41.93■■■■■ 4.3
ACSL3-209ENST00000535678 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
ACSL3-209ENST00000535678 MYO15BQ96JP2 1530 aa41.52■■■■■ 4.24
ACSL3-209ENST00000535678 UNC13AQ9UPW8 1703 aa41.37■■■■■ 4.21
ACSL3-209ENST00000535678 BICRAQ9NZM4 1560 aa41.16■■■■■ 4.18
ACSL3-209ENST00000535678 ZCCHC6Q5VYS8 1495 aaKnown RBP41.11■■■■■ 4.17
ACSL3-209ENST00000535678 DCAF1Q9Y4B6 1507 aa40.98■■■■■ 4.15
ACSL3-209ENST00000535678 SCRIBQ14160 1630 aa40.57■■■■■ 4.09
ACSL3-209ENST00000535678 SHROOM4Q9ULL8 1493 aa40.57■■■■■ 4.08
ACSL3-209ENST00000535678 CC2D2AQ9P2K1 1620 aa40.24■■■■■ 4.03
ACSL3-209ENST00000535678 CECR2Q9BXF3 1484 aa40.17■■■■■ 4.02
ACSL3-209ENST00000535678 EIF4G1Q04637 1599 aaKnown RBP40.15■■■■■ 4.02
ACSL3-209ENST00000535678 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
ACSL3-209ENST00000535678 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
ACSL3-209ENST00000535678 SMARCA4P51532 1647 aa38.7■■■■□ 3.79
ACSL3-209ENST00000535678 SMARCA2P51531 1590 aa38.64■■■■□ 3.78
ACSL3-209ENST00000535678 HMGXB3Q12766 1538 aa38.56■■■■□ 3.76
ACSL3-209ENST00000535678 BAZ1AQ9NRL2 1556 aaPredicted RBP38.52■■■■□ 3.76
ACSL3-209ENST00000535678 DNAJC5Q9H3Z4 198 aa38.5■■■■□ 3.75
ACSL3-209ENST00000535678 ERCC6Q03468 1493 aa38.49■■■■□ 3.75
ACSL3-209ENST00000535678 CUX2O14529 1486 aa38.4■■■■□ 3.74
ACSL3-209ENST00000535678 BAZ1BQ9UIG0 1483 aaKnown RBP38.4■■■■□ 3.74
ACSL3-209ENST00000535678 PEG3Q9GZU2 1588 aa38.31■■■■□ 3.72
ACSL3-209ENST00000535678 NESP48681 1621 aa38.3■■■■□ 3.72
ACSL3-209ENST00000535678 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
ACSL3-209ENST00000535678 LAMC3Q9Y6N6 1575 aa37.98■■■■□ 3.67
ACSL3-209ENST00000535678 THOC2Q8NI27 1593 aaKnown RBP37.84■■■■□ 3.65
ACSL3-209ENST00000535678 PDS5BQ9NTI5 1447 aa37.83■■■■□ 3.65
ACSL3-209ENST00000535678 WIZO95785 1651 aa37.78■■■■□ 3.64
ACSL3-209ENST00000535678 CADPSQ9ULU8 1353 aa37.76■■■■□ 3.64
ACSL3-209ENST00000535678 KIF21AQ7Z4S6 1674 aa37.73■■■■□ 3.63
ACSL3-209ENST00000535678 RSF1Q96T23 1441 aaPredicted RBP37.5■■■■□ 3.59
ACSL3-209ENST00000535678 MRC2Q9UBG0 1479 aa37.46■■■■□ 3.59
ACSL3-209ENST00000535678 WDR62O43379 1518 aa37.36■■■■□ 3.57
ACSL3-209ENST00000535678 CEP164Q9UPV0 1460 aa37.31■■■■□ 3.56
ACSL3-209ENST00000535678 CFTRP13569 1480 aa37.3■■■■□ 3.56
ACSL3-209ENST00000535678 FANCD2Q9BXW9 1451 aa37.3■■■■□ 3.56
ACSL3-209ENST00000535678 TOP2AP11388 1531 aaKnown RBP37.29■■■■□ 3.56
ACSL3-209ENST00000535678 URB2Q14146 1524 aaKnown RBP36.99■■■■□ 3.51
ACSL3-209ENST00000535678 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
ACSL3-209ENST00000535678 TRIM41Q8WV44 630 aa36.81■■■■□ 3.48
ACSL3-209ENST00000535678 PRDM2Q13029 1718 aa36.77■■■■□ 3.48
ACSL3-209ENST00000535678 OSCARQ8IYS5 282 aa36.76■■■■□ 3.48
ACSL3-209ENST00000535678 IFT140Q96RY7 1462 aa36.58■■■■□ 3.45
ACSL3-209ENST00000535678 TOPBP1Q92547 1522 aa36.58■■■■□ 3.45
ACSL3-209ENST00000535678 ZNF608Q9ULD9 1512 aaPredicted RBP36.54■■■■□ 3.44
ACSL3-209ENST00000535678 ABCC8Q09428 1581 aa36.5■■■■□ 3.43
ACSL3-209ENST00000535678 DNMBPQ6XZF7 1577 aa36.4■■■■□ 3.42
ACSL3-209ENST00000535678 EIF4G3O43432 1585 aaKnown RBP36.27■■■■□ 3.4
ACSL3-209ENST00000535678 AQRO60306 1485 aaKnown RBP eCLIP36.24■■■■□ 3.392e-6■■■■□ 20.1
ACSL3-209ENST00000535678 TARBP1Q13395 1621 aaKnown RBP36.23■■■■□ 3.39
ACSL3-209ENST00000535678 POLA1P09884 1462 aaPredicted RBP36.2■■■■□ 3.39
ACSL3-209ENST00000535678 RIMBP3CA6NJZ7 1639 aa36.16■■■■□ 3.38
ACSL3-209ENST00000535678 RIMBP3BA6NNM3 1639 aa36.16■■■■□ 3.38
ACSL3-209ENST00000535678 RIMBP3Q9UFD9 1639 aa36.16■■■■□ 3.38
ACSL3-209ENST00000535678 RAD54L2Q9Y4B4 1467 aa36.11■■■■□ 3.37
ACSL3-209ENST00000535678 SOGA1O94964 1423 aa36.09■■■■□ 3.37
ACSL3-209ENST00000535678 ARHGEF11O15085 1522 aa36.07■■■■□ 3.36
ACSL3-209ENST00000535678 FBLN2P98095 1184 aa36.05■■■■□ 3.36
ACSL3-209ENST00000535678 TDRD9Q8NDG6 1382 aaKnown RBP36.03■■■■□ 3.36
ACSL3-209ENST00000535678 CHD1O14646 1710 aa35.99■■■■□ 3.35
ACSL3-209ENST00000535678 FGD5Q6ZNL6 1462 aa35.98■■■■□ 3.35
ACSL3-209ENST00000535678 CUX1P39880 1505 aa35.94■■■■□ 3.34
ACSL3-209ENST00000535678 SUPT5HO00267 1087 aaKnown RBP35.91■■■■□ 3.34
ACSL3-209ENST00000535678 CYB5RLQ6IPT4 315 aa35.91■■■■□ 3.34
ACSL3-209ENST00000535678 SNAPC4Q5SXM2 1469 aa35.82■■■■□ 3.32
ACSL3-209ENST00000535678 WDR97A6NE52 1622 aa35.82■■■■□ 3.32
ACSL3-209ENST00000535678 CHMP7Q8WUX9 453 aaPredicted RBP35.78■■■■□ 3.32
ACSL3-209ENST00000535678 GRIN2BQ13224 1484 aa35.73■■■■□ 3.31
ACSL3-209ENST00000535678 MAGI1Q96QZ7 1491 aaPredicted RBP35.72■■■■□ 3.31
ACSL3-209ENST00000535678 ARAP1Q96P48 1450 aa35.71■■■■□ 3.31
ACSL3-209ENST00000535678 GAPVD1Q14C86 1478 aa35.62■■■■□ 3.29
ACSL3-209ENST00000535678 SYNJ2O15056 1496 aa35.61■■■■□ 3.29
ACSL3-209ENST00000535678 CLASP1Q7Z460 1538 aa35.61■■■■□ 3.29
ACSL3-209ENST00000535678 SYNJ1O43426 1573 aa35.59■■■■□ 3.29
ACSL3-209ENST00000535678 ABCA10Q8WWZ4 1543 aa35.57■■■■□ 3.28
ACSL3-209ENST00000535678 TRHP20396 242 aaPredicted RBP35.51■■■■□ 3.28
ACSL3-209ENST00000535678 PBRM1Q86U86 1689 aa35.5■■■■□ 3.27
ACSL3-209ENST00000535678 ABCA5Q8WWZ7 1642 aa35.46■■■■□ 3.27
ACSL3-209ENST00000535678 WRNQ14191 1432 aaPredicted RBP eCLIP35.45■■■■□ 3.27
ACSL3-209ENST00000535678 TOP2BQ02880 1626 aa35.34■■■■□ 3.25
ACSL3-209ENST00000535678 BIVM-ERCC5R4GMW8 1640 aa35.32■■■■□ 3.24
ACSL3-209ENST00000535678 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
ACSL3-209ENST00000535678 ADAMTS12P58397 1594 aa35.19■■■■□ 3.22
ACSL3-209ENST00000535678 FHAD1B1AJZ9 1412 aa35.17■■■■□ 3.22
ACSL3-209ENST00000535678 NUP160Q12769 1436 aa35.15■■■■□ 3.22
ACSL3-209ENST00000535678 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
ACSL3-209ENST00000535678 ERICH3Q5RHP9 1530 aa35.11■■■■□ 3.21
ACSL3-209ENST00000535678 ERCC6L2Q5T890 1561 aa35.08■■■■□ 3.21
ACSL3-209ENST00000535678 SHROOM2Q13796 1616 aa34.95■■■■□ 3.18
ACSL3-209ENST00000535678 JPH4Q96JJ6 628 aa34.89■■■■□ 3.18
ACSL3-209ENST00000535678 PRG4Q92954 1404 aaPredicted RBP34.85■■■■□ 3.17
ACSL3-209ENST00000535678 IGF1RP08069 1367 aa34.74■■■■□ 3.15
ACSL3-209ENST00000535678 KIF27Q86VH2 1401 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 284.7 ms