RNA–Protein interactions for RNA: ENST00000535560.1

RHOF-202, Transcript of ras homolog family member F, filopodia associated, humanhuman

TSL 5

Gene RHOF, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOF-202ENST00000535560 NISCHQ9Y2I1 1504 aa47.02■■■■■ 5.12
RHOF-202ENST00000535560 CCDC180Q9P1Z9 1646 aa42.06■■■■■ 4.32
RHOF-202ENST00000535560 ABCC9O60706 1549 aa41.64■■■■■ 4.26
RHOF-202ENST00000535560 RB1CC1Q8TDY2 1594 aa39.91■■■■□ 3.98
RHOF-202ENST00000535560 NACADO15069 1562 aa39.74■■■■□ 3.95
RHOF-202ENST00000535560 DCAF8L2P0C7V8 631 aa39.59■■■■□ 3.93
RHOF-202ENST00000535560 MYO15BQ96JP2 1530 aa39.36■■■■□ 3.89
RHOF-202ENST00000535560 ZCCHC6Q5VYS8 1495 aaKnown RBP38.99■■■■□ 3.83
RHOF-202ENST00000535560 DCAF1Q9Y4B6 1507 aa38.94■■■■□ 3.82
RHOF-202ENST00000535560 UNC13AQ9UPW8 1703 aa38.85■■■■□ 3.81
RHOF-202ENST00000535560 PABPN1Q86U42 306 aaKnown RBP eCLIP38.84■■■■□ 3.81
RHOF-202ENST00000535560 DNAJC5BQ9UF47 199 aa38.74■■■■□ 3.79
RHOF-202ENST00000535560 BICRAQ9NZM4 1560 aa38.59■■■■□ 3.77
RHOF-202ENST00000535560 SHROOM4Q9ULL8 1493 aa38.33■■■■□ 3.73
RHOF-202ENST00000535560 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
RHOF-202ENST00000535560 EIF4G1Q04637 1599 aaKnown RBP37.68■■■■□ 3.62
RHOF-202ENST00000535560 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
RHOF-202ENST00000535560 CECR2Q9BXF3 1484 aa37.54■■■■□ 3.6
RHOF-202ENST00000535560 NCAPD3P42695 1498 aa36.69■■■■□ 3.46
RHOF-202ENST00000535560 SMARCA4P51532 1647 aa36.56■■■■□ 3.44
RHOF-202ENST00000535560 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
RHOF-202ENST00000535560 SMARCA2P51531 1590 aa36.53■■■■□ 3.44
RHOF-202ENST00000535560 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
RHOF-202ENST00000535560 HMGXB3Q12766 1538 aa36.4■■■■□ 3.42
RHOF-202ENST00000535560 PEG3Q9GZU2 1588 aa36.27■■■■□ 3.4
RHOF-202ENST00000535560 BAZ1BQ9UIG0 1483 aaKnown RBP36.24■■■■□ 3.39
RHOF-202ENST00000535560 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
RHOF-202ENST00000535560 ERCC6Q03468 1493 aa36.02■■■■□ 3.36
RHOF-202ENST00000535560 CUX2O14529 1486 aa35.88■■■■□ 3.33
RHOF-202ENST00000535560 NESP48681 1621 aa35.82■■■■□ 3.32
RHOF-202ENST00000535560 LAMC3Q9Y6N6 1575 aa35.79■■■■□ 3.32
RHOF-202ENST00000535560 WIZO95785 1651 aa35.72■■■■□ 3.31
RHOF-202ENST00000535560 PDS5BQ9NTI5 1447 aa35.63■■■■□ 3.29
RHOF-202ENST00000535560 CADPSQ9ULU8 1353 aa35.59■■■■□ 3.29
RHOF-202ENST00000535560 RSF1Q96T23 1441 aaPredicted RBP35.58■■■■□ 3.29
RHOF-202ENST00000535560 DNAJC5Q9H3Z4 198 aa35.49■■■■□ 3.27
RHOF-202ENST00000535560 THOC2Q8NI27 1593 aaKnown RBP35.41■■■■□ 3.26
RHOF-202ENST00000535560 KIF21AQ7Z4S6 1674 aa35.39■■■■□ 3.26
RHOF-202ENST00000535560 TOP2AP11388 1531 aaKnown RBP35.36■■■■□ 3.25
RHOF-202ENST00000535560 CFTRP13569 1480 aa35.22■■■■□ 3.23
RHOF-202ENST00000535560 MRC2Q9UBG0 1479 aa35.2■■■■□ 3.23
RHOF-202ENST00000535560 CEP164Q9UPV0 1460 aa35.14■■■■□ 3.22
RHOF-202ENST00000535560 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
RHOF-202ENST00000535560 WDR62O43379 1518 aa35.08■■■■□ 3.21
RHOF-202ENST00000535560 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
RHOF-202ENST00000535560 PRDM2Q13029 1718 aa34.85■■■■□ 3.17
RHOF-202ENST00000535560 URB2Q14146 1524 aaKnown RBP34.74■■■■□ 3.15
RHOF-202ENST00000535560 ABCC8Q09428 1581 aa34.6■■■■□ 3.13
RHOF-202ENST00000535560 TOPBP1Q92547 1522 aa34.47■■■■□ 3.11
RHOF-202ENST00000535560 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
RHOF-202ENST00000535560 DNMBPQ6XZF7 1577 aa34.39■■■■□ 3.1
RHOF-202ENST00000535560 OSCARQ8IYS5 282 aa34.37■■■■□ 3.09
RHOF-202ENST00000535560 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
RHOF-202ENST00000535560 ZNF608Q9ULD9 1512 aaPredicted RBP34.24■■■■□ 3.07
RHOF-202ENST00000535560 POLA1P09884 1462 aaPredicted RBP34.13■■■■□ 3.05
RHOF-202ENST00000535560 TARBP1Q13395 1621 aaKnown RBP34.12■■■■□ 3.05
RHOF-202ENST00000535560 EIF4G3O43432 1585 aaKnown RBP34.07■■■■□ 3.05
RHOF-202ENST00000535560 SOGA1O94964 1423 aa34.06■■■■□ 3.04
RHOF-202ENST00000535560 AQRO60306 1485 aaKnown RBP eCLIP34.02■■■■□ 3.04
RHOF-202ENST00000535560 TRIM41Q8WV44 630 aa33.98■■■■□ 3.03
RHOF-202ENST00000535560 RAD54L2Q9Y4B4 1467 aa33.96■■■■□ 3.03
RHOF-202ENST00000535560 FGD5Q6ZNL6 1462 aa33.95■■■■□ 3.03
RHOF-202ENST00000535560 CUX1P39880 1505 aa33.94■■■■□ 3.02
RHOF-202ENST00000535560 WDR97A6NE52 1622 aa33.93■■■■□ 3.02
RHOF-202ENST00000535560 TDRD9Q8NDG6 1382 aaKnown RBP33.89■■■■□ 3.02
RHOF-202ENST00000535560 FBLN2P98095 1184 aa33.81■■■■□ 3
RHOF-202ENST00000535560 CHD1O14646 1710 aa33.75■■■□□ 2.99
RHOF-202ENST00000535560 GRIN2BQ13224 1484 aa33.72■■■□□ 2.99
RHOF-202ENST00000535560 MAGI1Q96QZ7 1491 aaPredicted RBP33.69■■■□□ 2.98
RHOF-202ENST00000535560 RIMBP3CA6NJZ7 1639 aa33.69■■■□□ 2.98
RHOF-202ENST00000535560 RIMBP3BA6NNM3 1639 aa33.69■■■□□ 2.98
RHOF-202ENST00000535560 RIMBP3Q9UFD9 1639 aa33.69■■■□□ 2.98
RHOF-202ENST00000535560 CHMP7Q8WUX9 453 aaPredicted RBP33.68■■■□□ 2.98
RHOF-202ENST00000535560 SNAPC4Q5SXM2 1469 aa33.67■■■□□ 2.98
RHOF-202ENST00000535560 ARHGEF11O15085 1522 aa33.65■■■□□ 2.98
RHOF-202ENST00000535560 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
RHOF-202ENST00000535560 GAPVD1Q14C86 1478 aa33.63■■■□□ 2.97
RHOF-202ENST00000535560 WRNQ14191 1432 aaPredicted RBP eCLIP33.63■■■□□ 2.97
RHOF-202ENST00000535560 SYNJ2O15056 1496 aa33.56■■■□□ 2.96
RHOF-202ENST00000535560 TOP2BQ02880 1626 aa33.56■■■□□ 2.96
RHOF-202ENST00000535560 BIVM-ERCC5R4GMW8 1640 aa33.54■■■□□ 2.96
RHOF-202ENST00000535560 PBRM1Q86U86 1689 aa33.51■■■□□ 2.95
RHOF-202ENST00000535560 SYNJ1O43426 1573 aa33.51■■■□□ 2.95
RHOF-202ENST00000535560 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
RHOF-202ENST00000535560 CYB5RLQ6IPT4 315 aa33.47■■■□□ 2.95
RHOF-202ENST00000535560 CLASP1Q7Z460 1538 aa33.4■■■□□ 2.94
RHOF-202ENST00000535560 ARAP1Q96P48 1450 aa33.31■■■□□ 2.92
RHOF-202ENST00000535560 ERICH3Q5RHP9 1530 aa33.26■■■□□ 2.91
RHOF-202ENST00000535560 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
RHOF-202ENST00000535560 GRIN2AQ12879 1464 aa33.25■■■□□ 2.91
RHOF-202ENST00000535560 ADAMTS12P58397 1594 aa33.21■■■□□ 2.91
RHOF-202ENST00000535560 NUP160Q12769 1436 aa33.12■■■□□ 2.89
RHOF-202ENST00000535560 CEP170Q5SW79 1584 aa33.03■■■□□ 2.88
RHOF-202ENST00000535560 TRHP20396 242 aaPredicted RBP33.01■■■□□ 2.87
RHOF-202ENST00000535560 KIF27Q86VH2 1401 aa33■■■□□ 2.87
RHOF-202ENST00000535560 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
RHOF-202ENST00000535560 IGF1RP08069 1367 aa32.91■■■□□ 2.86
RHOF-202ENST00000535560 JPH4Q96JJ6 628 aa32.88■■■□□ 2.85
RHOF-202ENST00000535560 CUL7Q14999 1698 aa32.82■■■□□ 2.84
RHOF-202ENST00000535560 ERCC6L2Q5T890 1561 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms