RNA–Protein interactions for RNA: ENST00000535557.5

ERCC5-207, Transcript of ERCC excision repair 5, endonuclease, humanhuman

TSL 5 BASIC

Gene ERCC5, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC5-207ENST00000535557 NISCHQ9Y2I1 1504 aa43.68■■■■■ 4.58
ERCC5-207ENST00000535557 CCDC180Q9P1Z9 1646 aa38.94■■■■□ 3.82
ERCC5-207ENST00000535557 ABCC9O60706 1549 aa38.24■■■■□ 3.71
ERCC5-207ENST00000535557 RB1CC1Q8TDY2 1594 aa36.68■■■■□ 3.46
ERCC5-207ENST00000535557 NACADO15069 1562 aa36.58■■■■□ 3.45
ERCC5-207ENST00000535557 DCAF8L2P0C7V8 631 aa36.55■■■■□ 3.44
ERCC5-207ENST00000535557 ZCCHC6Q5VYS8 1495 aaKnown RBP36.35■■■■□ 3.41
ERCC5-207ENST00000535557 MYO15BQ96JP2 1530 aa36.26■■■■□ 3.4
ERCC5-207ENST00000535557 UNC13AQ9UPW8 1703 aa36.08■■■■□ 3.37
ERCC5-207ENST00000535557 DCAF1Q9Y4B6 1507 aa36.08■■■■□ 3.37
ERCC5-207ENST00000535557 PABPN1Q86U42 306 aaKnown RBP eCLIP35.7■■■■□ 3.31
ERCC5-207ENST00000535557 BICRAQ9NZM4 1560 aa35.67■■■■□ 3.3
ERCC5-207ENST00000535557 SCRIBQ14160 1630 aa35.55■■■■□ 3.28
ERCC5-207ENST00000535557 DNAJC5BQ9UF47 199 aa35.28■■■■□ 3.24
ERCC5-207ENST00000535557 SHROOM4Q9ULL8 1493 aa35.08■■■■□ 3.21
ERCC5-207ENST00000535557 EIF4G1Q04637 1599 aaKnown RBP34.69■■■■□ 3.14
ERCC5-207ENST00000535557 CC2D2AQ9P2K1 1620 aa34.63■■■■□ 3.13
ERCC5-207ENST00000535557 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
ERCC5-207ENST00000535557 SMARCA4P51532 1647 aa33.97■■■■□ 3.03
ERCC5-207ENST00000535557 BAZ1AQ9NRL2 1556 aaPredicted RBP33.84■■■■□ 3.01
ERCC5-207ENST00000535557 ATAD2BQ9ULI0 1458 aa33.76■■■■□ 3
ERCC5-207ENST00000535557 NCAPD3P42695 1498 aa33.74■■■□□ 2.99
ERCC5-207ENST00000535557 MROH2BQ7Z745 1585 aa33.71■■■□□ 2.99
ERCC5-207ENST00000535557 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
ERCC5-207ENST00000535557 PEG3Q9GZU2 1588 aa33.6■■■□□ 2.97
ERCC5-207ENST00000535557 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
ERCC5-207ENST00000535557 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
ERCC5-207ENST00000535557 WIZO95785 1651 aa33.4■■■□□ 2.94
ERCC5-207ENST00000535557 RSF1Q96T23 1441 aaPredicted RBP33.21■■■□□ 2.91
ERCC5-207ENST00000535557 NESP48681 1621 aa33.09■■■□□ 2.89
ERCC5-207ENST00000535557 TOP2AP11388 1531 aaKnown RBP32.92■■■□□ 2.86
ERCC5-207ENST00000535557 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
ERCC5-207ENST00000535557 ERCC6Q03468 1493 aa32.91■■■□□ 2.86
ERCC5-207ENST00000535557 KIF21AQ7Z4S6 1674 aa32.76■■■□□ 2.84
ERCC5-207ENST00000535557 CADPSQ9ULU8 1353 aa32.74■■■□□ 2.83
ERCC5-207ENST00000535557 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
ERCC5-207ENST00000535557 PDS5BQ9NTI5 1447 aa32.62■■■□□ 2.81
ERCC5-207ENST00000535557 CUX2O14529 1486 aa32.6■■■□□ 2.81
ERCC5-207ENST00000535557 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
ERCC5-207ENST00000535557 CFTRP13569 1480 aa32.54■■■□□ 2.8
ERCC5-207ENST00000535557 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
ERCC5-207ENST00000535557 FANCD2Q9BXW9 1451 aa32.4■■■□□ 2.78
ERCC5-207ENST00000535557 CEP164Q9UPV0 1460 aa32.36■■■□□ 2.77
ERCC5-207ENST00000535557 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
ERCC5-207ENST00000535557 WDR62O43379 1518 aa32.28■■■□□ 2.76
ERCC5-207ENST00000535557 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.75
ERCC5-207ENST00000535557 URB2Q14146 1524 aaKnown RBP32.13■■■□□ 2.73
ERCC5-207ENST00000535557 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
ERCC5-207ENST00000535557 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
ERCC5-207ENST00000535557 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
ERCC5-207ENST00000535557 ABCC8Q09428 1581 aa31.79■■■□□ 2.68
ERCC5-207ENST00000535557 IFT140Q96RY7 1462 aa31.66■■■□□ 2.66
ERCC5-207ENST00000535557 ZNF608Q9ULD9 1512 aaPredicted RBP31.63■■■□□ 2.65
ERCC5-207ENST00000535557 CUX1P39880 1505 aa31.62■■■□□ 2.65
ERCC5-207ENST00000535557 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
ERCC5-207ENST00000535557 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
ERCC5-207ENST00000535557 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
ERCC5-207ENST00000535557 EIF4G3O43432 1585 aaKnown RBP31.51■■■□□ 2.64
ERCC5-207ENST00000535557 RAD54L2Q9Y4B4 1467 aa31.51■■■□□ 2.63
ERCC5-207ENST00000535557 SOGA1O94964 1423 aa31.44■■■□□ 2.62
ERCC5-207ENST00000535557 AQRO60306 1485 aaKnown RBP eCLIP31.41■■■□□ 2.62
ERCC5-207ENST00000535557 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
ERCC5-207ENST00000535557 BIVM-ERCC5R4GMW8 1640 aa31.33■■■□□ 2.61
ERCC5-207ENST00000535557 SYNJ1O43426 1573 aa31.33■■■□□ 2.61
ERCC5-207ENST00000535557 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
ERCC5-207ENST00000535557 TOP2BQ02880 1626 aa31.3■■■□□ 2.6
ERCC5-207ENST00000535557 WRNQ14191 1432 aaPredicted RBP eCLIP31.29■■■□□ 2.6
ERCC5-207ENST00000535557 CHD1O14646 1710 aa31.23■■■□□ 2.59
ERCC5-207ENST00000535557 OSCARQ8IYS5 282 aa31.21■■■□□ 2.59
ERCC5-207ENST00000535557 ABCA10Q8WWZ4 1543 aa31.17■■■□□ 2.58
ERCC5-207ENST00000535557 PBRM1Q86U86 1689 aa31.16■■■□□ 2.58
ERCC5-207ENST00000535557 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
ERCC5-207ENST00000535557 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
ERCC5-207ENST00000535557 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
ERCC5-207ENST00000535557 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
ERCC5-207ENST00000535557 FBLN2P98095 1184 aa31.01■■■□□ 2.55
ERCC5-207ENST00000535557 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.55
ERCC5-207ENST00000535557 SYNJ2O15056 1496 aa30.9■■■□□ 2.54
ERCC5-207ENST00000535557 CHMP7Q8WUX9 453 aaPredicted RBP30.87■■■□□ 2.53
ERCC5-207ENST00000535557 RIMBP3CA6NJZ7 1639 aa30.86■■■□□ 2.53
ERCC5-207ENST00000535557 RIMBP3BA6NNM3 1639 aa30.86■■■□□ 2.53
ERCC5-207ENST00000535557 RIMBP3Q9UFD9 1639 aa30.86■■■□□ 2.53
ERCC5-207ENST00000535557 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
ERCC5-207ENST00000535557 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
ERCC5-207ENST00000535557 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
ERCC5-207ENST00000535557 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
ERCC5-207ENST00000535557 TRIM41Q8WV44 630 aa30.73■■■□□ 2.51
ERCC5-207ENST00000535557 GRIN2AQ12879 1464 aa30.7■■■□□ 2.51
ERCC5-207ENST00000535557 FHAD1B1AJZ9 1412 aa30.68■■■□□ 2.5
ERCC5-207ENST00000535557 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
ERCC5-207ENST00000535557 KIF27Q86VH2 1401 aa30.62■■■□□ 2.49
ERCC5-207ENST00000535557 NUP160Q12769 1436 aa30.56■■■□□ 2.48
ERCC5-207ENST00000535557 IGF1RP08069 1367 aa30.55■■■□□ 2.48
ERCC5-207ENST00000535557 ARAP1Q96P48 1450 aa30.53■■■□□ 2.48
ERCC5-207ENST00000535557 CUL7Q14999 1698 aa30.52■■■□□ 2.48
ERCC5-207ENST00000535557 CYB5RLQ6IPT4 315 aa30.48■■■□□ 2.47
ERCC5-207ENST00000535557 RUSC2Q8N2Y8 1516 aa30.45■■■□□ 2.47
ERCC5-207ENST00000535557 SHROOM2Q13796 1616 aa30.43■■■□□ 2.46
ERCC5-207ENST00000535557 ERCC6L2Q5T890 1561 aa30.41■■■□□ 2.46
ERCC5-207ENST00000535557 CARMIL1Q5VZK9 1371 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms