RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.15□□□□□ -1.421e-15■□□□□ 8.8
CPSF7-214ENST00000535222 PCBP1Q15365 356 aaKnown RBP eCLIP8.37□□□□□ -1.071e-15■■■■■ 80.2
CPSF7-214ENST00000535222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.311e-11■■□□□ 12.1
CPSF7-214ENST00000535222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.41□□□□□ -1.384e-11■■□□□ 12.6
CPSF7-214ENST00000535222 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.945e-10■■■■■ 57.2
CPSF7-214ENST00000535222 SF3B4Q15427 424 aaKnown RBP eCLIP6.89□□□□□ -1.311e-9■■■■■ 29.1
CPSF7-214ENST00000535222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.85□□□□□ -0.674e-9■■■□□ 15.2
CPSF7-214ENST00000535222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.21□□□□□ -1.265e-9■■□□□ 12.4
CPSF7-214ENST00000535222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.81□□□□□ -18e-9■■■■■ 27.8
CPSF7-214ENST00000535222 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.22□□□□□ -1.258e-9■■□□□ 12.1
CPSF7-214ENST00000535222 U2AF2P26368 475 aaKnown RBP eCLIP8.27□□□□□ -1.099e-9■■■□□ 15
CPSF7-214ENST00000535222 HNRNPKP61978 463 aaKnown RBP eCLIP7.84□□□□□ -1.152e-8■■□□□ 13.1
CPSF7-214ENST00000535222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.442e-8■■□□□ 11.7
CPSF7-214ENST00000535222 XRN2Q9H0D6 950 aaKnown RBP eCLIP10□□□□□ -0.813e-8■■■□□ 15.8
CPSF7-214ENST00000535222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.84□□□□□ -1.475e-8■■■■■ 34.6
CPSF7-214ENST00000535222 PPIGQ13427 754 aaKnown RBP eCLIP9.64□□□□□ -0.877e-8■■■□□ 16.3
CPSF7-214ENST00000535222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.45□□□□□ -1.221e-7■■■□□ 17.2
CPSF7-214ENST00000535222 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.71□□□□□ -0.862e-7■■■■□ 22.5
CPSF7-214ENST00000535222 EFTUD2Q15029 972 aaKnown RBP eCLIP6.6□□□□□ -1.352e-7■■■■■ 34.4
CPSF7-214ENST00000535222 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.033e-7■■■■■ 40.5
CPSF7-214ENST00000535222 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.533e-7■■□□□ 12.8
CPSF7-214ENST00000535222 GPKOWQ92917 476 aaPredicted RBP eCLIP8.74□□□□□ -1.013e-7■■■■□ 21.6
CPSF7-214ENST00000535222 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.014e-7■■■□□ 16.7
CPSF7-214ENST00000535222 RBFOX2O43251 390 aaKnown RBP eCLIP4.81□□□□□ -1.644e-7■□□□□ 10.3
CPSF7-214ENST00000535222 PRPF4O43172 522 aaKnown RBP eCLIP6.96□□□□□ -1.39e-7■■■■■ 34.9
CPSF7-214ENST00000535222 RBM22Q9NW64 420 aaKnown RBP eCLIP6.92□□□□□ -1.31e-6■■■■□ 23.9
CPSF7-214ENST00000535222 PCBP2Q15366 365 aaKnown RBP eCLIP7.26□□□□□ -1.251e-6■■■■□ 23.4
CPSF7-214ENST00000535222 DDX3XO00571 662 aaKnown RBP eCLIP7.09□□□□□ -1.271e-6■■■■□ 20.9
CPSF7-214ENST00000535222 ZNF622Q969S3 477 aaKnown RBP eCLIP10.76□□□□□ -0.692e-6■□□□□ 9.3
CPSF7-214ENST00000535222 NCBP2P52298 156 aaKnown RBP eCLIP6.12□□□□□ -1.432e-6■■□□□ 12.6
CPSF7-214ENST00000535222 ILF3Q12906 894 aaKnown RBP eCLIP7.46□□□□□ -1.222e-6■■■■□ 21.5
CPSF7-214ENST00000535222 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.84□□□□□ -1.154e-6■■■■■ 36.6
CPSF7-214ENST00000535222 TIAL1Q01085 375 aaKnown RBP eCLIP6.43□□□□□ -1.385e-6■■■■□ 21
CPSF7-214ENST00000535222 SF3B1O75533 1304 aaKnown RBP eCLIP8.44□□□□□ -1.067e-6■■■■■ 28.7
CPSF7-214ENST00000535222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.58□□□□□ -0.888e-6■■□□□ 11.4
CPSF7-214ENST00000535222 SF3A3Q12874 501 aaKnown RBP eCLIP5.23□□□□□ -1.579e-6■■□□□ 12.4
Retrieved 36 of 36 RNA–protein pairs in 8.1 ms