RNA–Protein interactions for RNA: ENST00000535177.1

CYB561A3-205, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-205ENST00000535177 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.06
CYB561A3-205ENST00000535177 ABCC9O60706 1549 aa30.7■■■□□ 2.51
CYB561A3-205ENST00000535177 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
CYB561A3-205ENST00000535177 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
CYB561A3-205ENST00000535177 NACADO15069 1562 aa28.98■■■□□ 2.23
CYB561A3-205ENST00000535177 DNAJC5BQ9UF47 199 aa28.97■■■□□ 2.23
CYB561A3-205ENST00000535177 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
CYB561A3-205ENST00000535177 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
CYB561A3-205ENST00000535177 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.17
CYB561A3-205ENST00000535177 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
CYB561A3-205ENST00000535177 ZCCHC6Q5VYS8 1495 aaKnown RBP28.52■■■□□ 2.16
CYB561A3-205ENST00000535177 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
CYB561A3-205ENST00000535177 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
CYB561A3-205ENST00000535177 SCRIBQ14160 1630 aa27.93■■■□□ 2.06
CYB561A3-205ENST00000535177 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
CYB561A3-205ENST00000535177 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
CYB561A3-205ENST00000535177 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
CYB561A3-205ENST00000535177 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
CYB561A3-205ENST00000535177 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
CYB561A3-205ENST00000535177 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
CYB561A3-205ENST00000535177 SMARCA4P51532 1647 aa26.66■■□□□ 1.86
CYB561A3-205ENST00000535177 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
CYB561A3-205ENST00000535177 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
CYB561A3-205ENST00000535177 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
CYB561A3-205ENST00000535177 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
CYB561A3-205ENST00000535177 PEG3Q9GZU2 1588 aa26.42■■□□□ 1.82
CYB561A3-205ENST00000535177 NESP48681 1621 aa26.42■■□□□ 1.82
CYB561A3-205ENST00000535177 CUX2O14529 1486 aa26.42■■□□□ 1.82
CYB561A3-205ENST00000535177 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
CYB561A3-205ENST00000535177 BAZ1BQ9UIG0 1483 aaKnown RBP26.38■■□□□ 1.81
CYB561A3-205ENST00000535177 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
CYB561A3-205ENST00000535177 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
CYB561A3-205ENST00000535177 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
CYB561A3-205ENST00000535177 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
CYB561A3-205ENST00000535177 WIZO95785 1651 aa26.08■■□□□ 1.77
CYB561A3-205ENST00000535177 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
CYB561A3-205ENST00000535177 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
CYB561A3-205ENST00000535177 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.75
CYB561A3-205ENST00000535177 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
CYB561A3-205ENST00000535177 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
CYB561A3-205ENST00000535177 WDR62O43379 1518 aa25.73■■□□□ 1.71
CYB561A3-205ENST00000535177 SUPT5HO00267 1087 aaKnown RBP25.7■■□□□ 1.7
CYB561A3-205ENST00000535177 CFTRP13569 1480 aa25.67■■□□□ 1.7
CYB561A3-205ENST00000535177 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
CYB561A3-205ENST00000535177 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
CYB561A3-205ENST00000535177 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
CYB561A3-205ENST00000535177 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
CYB561A3-205ENST00000535177 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
CYB561A3-205ENST00000535177 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
CYB561A3-205ENST00000535177 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
CYB561A3-205ENST00000535177 TOPBP1Q92547 1522 aa25.18■■□□□ 1.62
CYB561A3-205ENST00000535177 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
CYB561A3-205ENST00000535177 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
CYB561A3-205ENST00000535177 ABCC8Q09428 1581 aa25.07■■□□□ 1.6
CYB561A3-205ENST00000535177 DNMBPQ6XZF7 1577 aa25.06■■□□□ 1.6
CYB561A3-205ENST00000535177 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
CYB561A3-205ENST00000535177 TARBP1Q13395 1621 aaKnown RBP25■■□□□ 1.59
CYB561A3-205ENST00000535177 RIMBP3CA6NJZ7 1639 aa24.95■■□□□ 1.58
CYB561A3-205ENST00000535177 RIMBP3BA6NNM3 1639 aa24.95■■□□□ 1.58
CYB561A3-205ENST00000535177 RIMBP3Q9UFD9 1639 aa24.95■■□□□ 1.58
CYB561A3-205ENST00000535177 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.58
CYB561A3-205ENST00000535177 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
CYB561A3-205ENST00000535177 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
CYB561A3-205ENST00000535177 CHD1O14646 1710 aa24.86■■□□□ 1.57
CYB561A3-205ENST00000535177 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
CYB561A3-205ENST00000535177 SOGA1O94964 1423 aa24.8■■□□□ 1.56
CYB561A3-205ENST00000535177 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
CYB561A3-205ENST00000535177 CUX1P39880 1505 aa24.76■■□□□ 1.55
CYB561A3-205ENST00000535177 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
CYB561A3-205ENST00000535177 FBLN2P98095 1184 aa24.71■■□□□ 1.55
CYB561A3-205ENST00000535177 CYB5RLQ6IPT4 315 aa24.67■■□□□ 1.54
CYB561A3-205ENST00000535177 WDR97A6NE52 1622 aa24.64■■□□□ 1.54
CYB561A3-205ENST00000535177 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
CYB561A3-205ENST00000535177 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
CYB561A3-205ENST00000535177 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
CYB561A3-205ENST00000535177 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
CYB561A3-205ENST00000535177 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
CYB561A3-205ENST00000535177 CLASP1Q7Z460 1538 aa24.56■■□□□ 1.52
CYB561A3-205ENST00000535177 BIVM-ERCC5R4GMW8 1640 aa24.55■■□□□ 1.52
CYB561A3-205ENST00000535177 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
CYB561A3-205ENST00000535177 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
CYB561A3-205ENST00000535177 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
CYB561A3-205ENST00000535177 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
CYB561A3-205ENST00000535177 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
CYB561A3-205ENST00000535177 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
CYB561A3-205ENST00000535177 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
CYB561A3-205ENST00000535177 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
CYB561A3-205ENST00000535177 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
CYB561A3-205ENST00000535177 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
CYB561A3-205ENST00000535177 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
CYB561A3-205ENST00000535177 ERCC6L2Q5T890 1561 aa24.23■■□□□ 1.47
CYB561A3-205ENST00000535177 CEP170Q5SW79 1584 aa24.22■■□□□ 1.47
CYB561A3-205ENST00000535177 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
CYB561A3-205ENST00000535177 NUP160Q12769 1436 aa24.19■■□□□ 1.46
CYB561A3-205ENST00000535177 FHAD1B1AJZ9 1412 aa24.16■■□□□ 1.46
CYB561A3-205ENST00000535177 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
CYB561A3-205ENST00000535177 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
CYB561A3-205ENST00000535177 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
CYB561A3-205ENST00000535177 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
CYB561A3-205ENST00000535177 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms