RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 NISCHQ9Y2I1 1504 aa46.41■■■■■ 5.02
OTUB1-205ENST00000535140 ABCC9O60706 1549 aa41.79■■■■■ 4.28
OTUB1-205ENST00000535140 CCDC180Q9P1Z9 1646 aa41.68■■■■■ 4.26
OTUB1-205ENST00000535140 RB1CC1Q8TDY2 1594 aa39.71■■■■□ 3.95
OTUB1-205ENST00000535140 NACADO15069 1562 aa39.39■■■■□ 3.9
OTUB1-205ENST00000535140 DCAF8L2P0C7V8 631 aa39.24■■■■□ 3.87
OTUB1-205ENST00000535140 DNAJC5BQ9UF47 199 aa39.2■■■■□ 3.87
OTUB1-205ENST00000535140 PABPN1Q86U42 306 aaKnown RBP eCLIP38.88■■■■□ 3.813e-7■■■■□ 26.7
OTUB1-205ENST00000535140 UNC13AQ9UPW8 1703 aa38.84■■■■□ 3.81
OTUB1-205ENST00000535140 MYO15BQ96JP2 1530 aa38.79■■■■□ 3.8
OTUB1-205ENST00000535140 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.76
OTUB1-205ENST00000535140 ZCCHC6Q5VYS8 1495 aaKnown RBP38.47■■■■□ 3.75
OTUB1-205ENST00000535140 DCAF1Q9Y4B6 1507 aa38.28■■■■□ 3.72
OTUB1-205ENST00000535140 SCRIBQ14160 1630 aa38.04■■■■□ 3.68
OTUB1-205ENST00000535140 SHROOM4Q9ULL8 1493 aa37.97■■■■□ 3.67
OTUB1-205ENST00000535140 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
OTUB1-205ENST00000535140 EIF4G1Q04637 1599 aaKnown RBP37.63■■■■□ 3.61
OTUB1-205ENST00000535140 CECR2Q9BXF3 1484 aa37.62■■■■□ 3.61
OTUB1-205ENST00000535140 NCAPD3P42695 1498 aa36.36■■■■□ 3.41
OTUB1-205ENST00000535140 ATAD2BQ9ULI0 1458 aa36.26■■■■□ 3.4
OTUB1-205ENST00000535140 SMARCA4P51532 1647 aa36.24■■■■□ 3.39
OTUB1-205ENST00000535140 SMARCA2P51531 1590 aa36.16■■■■□ 3.38
OTUB1-205ENST00000535140 HMGXB3Q12766 1538 aa36.11■■■■□ 3.37
OTUB1-205ENST00000535140 ERCC6Q03468 1493 aa36.07■■■■□ 3.37
OTUB1-205ENST00000535140 BAZ1AQ9NRL2 1556 aaPredicted RBP36.04■■■■□ 3.36
OTUB1-205ENST00000535140 DNAJC5Q9H3Z4 198 aa36■■■■□ 3.35
OTUB1-205ENST00000535140 CUX2O14529 1486 aa35.98■■■■□ 3.35
OTUB1-205ENST00000535140 BAZ1BQ9UIG0 1483 aaKnown RBP35.94■■■■□ 3.34
OTUB1-205ENST00000535140 NESP48681 1621 aa35.89■■■■□ 3.34
OTUB1-205ENST00000535140 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
OTUB1-205ENST00000535140 MROH2BQ7Z745 1585 aa35.79■■■■□ 3.32
OTUB1-205ENST00000535140 LAMC3Q9Y6N6 1575 aa35.57■■■■□ 3.28
OTUB1-205ENST00000535140 THOC2Q8NI27 1593 aaKnown RBP35.52■■■■□ 3.28
OTUB1-205ENST00000535140 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
OTUB1-205ENST00000535140 WIZO95785 1651 aa35.38■■■■□ 3.25
OTUB1-205ENST00000535140 PDS5BQ9NTI5 1447 aa35.35■■■■□ 3.25
OTUB1-205ENST00000535140 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
OTUB1-205ENST00000535140 MRC2Q9UBG0 1479 aa35.09■■■■□ 3.21
OTUB1-205ENST00000535140 RSF1Q96T23 1441 aaPredicted RBP35■■■■□ 3.19
OTUB1-205ENST00000535140 WDR62O43379 1518 aa35■■■■□ 3.19
OTUB1-205ENST00000535140 CEP164Q9UPV0 1460 aa34.95■■■■□ 3.19
OTUB1-205ENST00000535140 TOP2AP11388 1531 aaKnown RBP34.91■■■■□ 3.18
OTUB1-205ENST00000535140 FANCD2Q9BXW9 1451 aa34.9■■■■□ 3.18
OTUB1-205ENST00000535140 CFTRP13569 1480 aa34.85■■■■□ 3.17
OTUB1-205ENST00000535140 URB2Q14146 1524 aaKnown RBP34.62■■■■□ 3.13
OTUB1-205ENST00000535140 PRDM2Q13029 1718 aa34.54■■■■□ 3.12
OTUB1-205ENST00000535140 CCDC88BA6NC98 1476 aa34.5■■■■□ 3.11
OTUB1-205ENST00000535140 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
OTUB1-205ENST00000535140 OSCARQ8IYS5 282 aa34.31■■■■□ 3.08
OTUB1-205ENST00000535140 TOPBP1Q92547 1522 aa34.23■■■■□ 3.07
OTUB1-205ENST00000535140 IFT140Q96RY7 1462 aa34.22■■■■□ 3.07
OTUB1-205ENST00000535140 ZNF608Q9ULD9 1512 aaPredicted RBP34.21■■■■□ 3.07
OTUB1-205ENST00000535140 DNMBPQ6XZF7 1577 aa34.11■■■■□ 3.05
OTUB1-205ENST00000535140 ABCC8Q09428 1581 aa34.1■■■■□ 3.05
OTUB1-205ENST00000535140 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
OTUB1-205ENST00000535140 RIMBP3CA6NJZ7 1639 aa33.93■■■■□ 3.02
OTUB1-205ENST00000535140 RIMBP3BA6NNM3 1639 aa33.93■■■■□ 3.02
OTUB1-205ENST00000535140 RIMBP3Q9UFD9 1639 aa33.93■■■■□ 3.02
OTUB1-205ENST00000535140 TARBP1Q13395 1621 aaKnown RBP33.93■■■■□ 3.02
OTUB1-205ENST00000535140 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.013e-10■■■■■ 44.3
OTUB1-205ENST00000535140 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
OTUB1-205ENST00000535140 ARHGEF11O15085 1522 aa33.82■■■■□ 3
OTUB1-205ENST00000535140 CHD1O14646 1710 aa33.81■■■■□ 3
OTUB1-205ENST00000535140 RAD54L2Q9Y4B4 1467 aa33.77■■■■□ 3
OTUB1-205ENST00000535140 SOGA1O94964 1423 aa33.7■■■□□ 2.99
OTUB1-205ENST00000535140 FBLN2P98095 1184 aa33.69■■■□□ 2.98
OTUB1-205ENST00000535140 TDRD9Q8NDG6 1382 aaKnown RBP33.68■■■□□ 2.98
OTUB1-205ENST00000535140 FGD5Q6ZNL6 1462 aa33.68■■■□□ 2.98
OTUB1-205ENST00000535140 CUX1P39880 1505 aa33.63■■■□□ 2.97
OTUB1-205ENST00000535140 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
OTUB1-205ENST00000535140 CYB5RLQ6IPT4 315 aa33.55■■■□□ 2.96
OTUB1-205ENST00000535140 WDR97A6NE52 1622 aa33.53■■■□□ 2.96
OTUB1-205ENST00000535140 ARAP1Q96P48 1450 aa33.49■■■□□ 2.95
OTUB1-205ENST00000535140 SUPT5HO00267 1087 aaKnown RBP33.46■■■□□ 2.95
OTUB1-205ENST00000535140 GRIN2BQ13224 1484 aa33.43■■■□□ 2.94
OTUB1-205ENST00000535140 MAGI1Q96QZ7 1491 aaPredicted RBP33.43■■■□□ 2.94
OTUB1-205ENST00000535140 CHMP7Q8WUX9 453 aaPredicted RBP33.39■■■□□ 2.94
OTUB1-205ENST00000535140 CLASP1Q7Z460 1538 aa33.38■■■□□ 2.93
OTUB1-205ENST00000535140 SYNJ1O43426 1573 aa33.35■■■□□ 2.93
OTUB1-205ENST00000535140 PBRM1Q86U86 1689 aa33.33■■■□□ 2.93
OTUB1-205ENST00000535140 SYNJ2O15056 1496 aa33.32■■■□□ 2.92
OTUB1-205ENST00000535140 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
OTUB1-205ENST00000535140 ABCA10Q8WWZ4 1543 aa33.25■■■□□ 2.91
OTUB1-205ENST00000535140 ABCA5Q8WWZ7 1642 aa33.24■■■□□ 2.91
OTUB1-205ENST00000535140 TRHP20396 242 aaPredicted RBP33.23■■■□□ 2.91
OTUB1-205ENST00000535140 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
OTUB1-205ENST00000535140 BIVM-ERCC5R4GMW8 1640 aa33.07■■■□□ 2.88
OTUB1-205ENST00000535140 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
OTUB1-205ENST00000535140 ADAMTS12P58397 1594 aa33.01■■■□□ 2.88
OTUB1-205ENST00000535140 GRIN2AQ12879 1464 aa33.01■■■□□ 2.88
OTUB1-205ENST00000535140 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
OTUB1-205ENST00000535140 ERCC6L2Q5T890 1561 aa32.9■■■□□ 2.86
OTUB1-205ENST00000535140 NUP160Q12769 1436 aa32.88■■■□□ 2.85
OTUB1-205ENST00000535140 FHAD1B1AJZ9 1412 aa32.86■■■□□ 2.85
OTUB1-205ENST00000535140 ERICH3Q5RHP9 1530 aa32.83■■■□□ 2.85
OTUB1-205ENST00000535140 SHROOM2Q13796 1616 aa32.76■■■□□ 2.83
OTUB1-205ENST00000535140 PRG4Q92954 1404 aaPredicted RBP32.6■■■□□ 2.81
OTUB1-205ENST00000535140 RUSC2Q8N2Y8 1516 aa32.55■■■□□ 2.8
OTUB1-205ENST00000535140 JPH4Q96JJ6 628 aa32.51■■■□□ 2.79
OTUB1-205ENST00000535140 KIF27Q86VH2 1401 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms