RNA–Protein interactions for RNA: ENST00000535077.1

TSG101-203, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-203ENST00000535077 NISCHQ9Y2I1 1504 aa49.43■■■■■ 5.5
TSG101-203ENST00000535077 CCDC180Q9P1Z9 1646 aa44.23■■■■■ 4.67
TSG101-203ENST00000535077 ABCC9O60706 1549 aa44.11■■■■■ 4.65
TSG101-203ENST00000535077 RB1CC1Q8TDY2 1594 aa42.05■■■■■ 4.32
TSG101-203ENST00000535077 NACADO15069 1562 aa41.82■■■■■ 4.29
TSG101-203ENST00000535077 DCAF8L2P0C7V8 631 aa41.72■■■■■ 4.27
TSG101-203ENST00000535077 MYO15BQ96JP2 1530 aa41.31■■■■■ 4.2
TSG101-203ENST00000535077 DNAJC5BQ9UF47 199 aa41.23■■■■■ 4.19
TSG101-203ENST00000535077 PABPN1Q86U42 306 aaKnown RBP eCLIP41.13■■■■■ 4.17
TSG101-203ENST00000535077 UNC13AQ9UPW8 1703 aa41.01■■■■■ 4.16
TSG101-203ENST00000535077 ZCCHC6Q5VYS8 1495 aaKnown RBP40.99■■■■■ 4.15
TSG101-203ENST00000535077 DCAF1Q9Y4B6 1507 aa40.84■■■■■ 4.13
TSG101-203ENST00000535077 BICRAQ9NZM4 1560 aa40.79■■■■■ 4.12
TSG101-203ENST00000535077 SCRIBQ14160 1630 aa40.33■■■■■ 4.05
TSG101-203ENST00000535077 SHROOM4Q9ULL8 1493 aa40.32■■■■■ 4.04
TSG101-203ENST00000535077 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
TSG101-203ENST00000535077 EIF4G1Q04637 1599 aaKnown RBP39.8■■■■□ 3.96
TSG101-203ENST00000535077 CECR2Q9BXF3 1484 aa39.73■■■■□ 3.95
TSG101-203ENST00000535077 NCAPD3P42695 1498 aa38.63■■■■□ 3.77
TSG101-203ENST00000535077 ATAD2BQ9ULI0 1458 aa38.52■■■■□ 3.76
TSG101-203ENST00000535077 SMARCA4P51532 1647 aa38.49■■■■□ 3.75
TSG101-203ENST00000535077 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
TSG101-203ENST00000535077 BAZ1AQ9NRL2 1556 aaPredicted RBP38.36■■■■□ 3.73
TSG101-203ENST00000535077 HMGXB3Q12766 1538 aa38.33■■■■□ 3.73
TSG101-203ENST00000535077 BAZ1BQ9UIG0 1483 aaKnown RBP38.16■■■■□ 3.7
TSG101-203ENST00000535077 PEG3Q9GZU2 1588 aa38.13■■■■□ 3.69
TSG101-203ENST00000535077 ERCC6Q03468 1493 aa38.09■■■■□ 3.69
TSG101-203ENST00000535077 MROH2BQ7Z745 1585 aa38.08■■■■□ 3.69
TSG101-203ENST00000535077 CUX2O14529 1486 aa37.96■■■■□ 3.67
TSG101-203ENST00000535077 NESP48681 1621 aa37.93■■■■□ 3.66
TSG101-203ENST00000535077 DNAJC5Q9H3Z4 198 aa37.77■■■■□ 3.64
TSG101-203ENST00000535077 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.63
TSG101-203ENST00000535077 WIZO95785 1651 aa37.6■■■■□ 3.61
TSG101-203ENST00000535077 PDS5BQ9NTI5 1447 aa37.52■■■■□ 3.6
TSG101-203ENST00000535077 THOC2Q8NI27 1593 aaKnown RBP37.48■■■■□ 3.59
TSG101-203ENST00000535077 CADPSQ9ULU8 1353 aa37.47■■■■□ 3.59
TSG101-203ENST00000535077 KIF21AQ7Z4S6 1674 aa37.4■■■■□ 3.58
TSG101-203ENST00000535077 RSF1Q96T23 1441 aaPredicted RBP37.38■■■■□ 3.57
TSG101-203ENST00000535077 TOP2AP11388 1531 aaKnown RBP37.16■■■■□ 3.54
TSG101-203ENST00000535077 MRC2Q9UBG0 1479 aa37.16■■■■□ 3.54
TSG101-203ENST00000535077 CFTRP13569 1480 aa37.07■■■■□ 3.52
TSG101-203ENST00000535077 CEP164Q9UPV0 1460 aa37.05■■■■□ 3.52
TSG101-203ENST00000535077 WDR62O43379 1518 aa37.04■■■■□ 3.52
TSG101-203ENST00000535077 FANCD2Q9BXW9 1451 aa37.02■■■■□ 3.52
TSG101-203ENST00000535077 CCDC88BA6NC98 1476 aa36.76■■■■□ 3.48
TSG101-203ENST00000535077 URB2Q14146 1524 aaKnown RBP36.69■■■■□ 3.46
TSG101-203ENST00000535077 PRDM2Q13029 1718 aa36.61■■■■□ 3.45
TSG101-203ENST00000535077 TOPBP1Q92547 1522 aa36.33■■■■□ 3.41
TSG101-203ENST00000535077 IFT140Q96RY7 1462 aa36.31■■■■□ 3.4
TSG101-203ENST00000535077 OSCARQ8IYS5 282 aa36.31■■■■□ 3.4
TSG101-203ENST00000535077 ABCC8Q09428 1581 aa36.3■■■■□ 3.4
TSG101-203ENST00000535077 DNMBPQ6XZF7 1577 aa36.21■■■■□ 3.39
TSG101-203ENST00000535077 ZNF608Q9ULD9 1512 aaPredicted RBP36.21■■■■□ 3.39
TSG101-203ENST00000535077 TRIM41Q8WV44 630 aa36.19■■■■□ 3.38
TSG101-203ENST00000535077 EIF4G3O43432 1585 aaKnown RBP35.99■■■■□ 3.35
TSG101-203ENST00000535077 POLA1P09884 1462 aaPredicted RBP35.98■■■■□ 3.35
TSG101-203ENST00000535077 TARBP1Q13395 1621 aaKnown RBP35.97■■■■□ 3.35
TSG101-203ENST00000535077 AQRO60306 1485 aaKnown RBP eCLIP35.92■■■■□ 3.34
TSG101-203ENST00000535077 SUPT5HO00267 1087 aaKnown RBP35.89■■■■□ 3.34
TSG101-203ENST00000535077 RAD54L2Q9Y4B4 1467 aa35.85■■■■□ 3.33
TSG101-203ENST00000535077 SOGA1O94964 1423 aa35.84■■■■□ 3.33
TSG101-203ENST00000535077 FGD5Q6ZNL6 1462 aa35.78■■■■□ 3.32
TSG101-203ENST00000535077 CUX1P39880 1505 aa35.76■■■■□ 3.31
TSG101-203ENST00000535077 TDRD9Q8NDG6 1382 aaKnown RBP35.75■■■■□ 3.31
TSG101-203ENST00000535077 RIMBP3CA6NJZ7 1639 aa35.72■■■■□ 3.31
TSG101-203ENST00000535077 RIMBP3BA6NNM3 1639 aa35.72■■■■□ 3.31
TSG101-203ENST00000535077 RIMBP3Q9UFD9 1639 aa35.72■■■■□ 3.31
TSG101-203ENST00000535077 FBLN2P98095 1184 aa35.7■■■■□ 3.31
TSG101-203ENST00000535077 CHD1O14646 1710 aa35.66■■■■□ 3.3
TSG101-203ENST00000535077 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
TSG101-203ENST00000535077 WDR97A6NE52 1622 aa35.64■■■■□ 3.3
TSG101-203ENST00000535077 SNAPC4Q5SXM2 1469 aa35.56■■■■□ 3.28
TSG101-203ENST00000535077 GRIN2BQ13224 1484 aa35.51■■■■□ 3.28
TSG101-203ENST00000535077 MAGI1Q96QZ7 1491 aaPredicted RBP35.48■■■■□ 3.27
TSG101-203ENST00000535077 CHMP7Q8WUX9 453 aaPredicted RBP35.47■■■■□ 3.27
TSG101-203ENST00000535077 CYB5RLQ6IPT4 315 aa35.44■■■■□ 3.26
TSG101-203ENST00000535077 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
TSG101-203ENST00000535077 ABCA10Q8WWZ4 1543 aa35.39■■■■□ 3.26
TSG101-203ENST00000535077 SYNJ2O15056 1496 aa35.36■■■■□ 3.25
TSG101-203ENST00000535077 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
TSG101-203ENST00000535077 ARAP1Q96P48 1450 aa35.31■■■■□ 3.24
TSG101-203ENST00000535077 WRNQ14191 1432 aaPredicted RBP eCLIP35.31■■■■□ 3.247e-7■■■■■ 52.5
TSG101-203ENST00000535077 CLASP1Q7Z460 1538 aa35.3■■■■□ 3.24
TSG101-203ENST00000535077 PBRM1Q86U86 1689 aa35.3■■■■□ 3.24
TSG101-203ENST00000535077 ABCA5Q8WWZ7 1642 aa35.28■■■■□ 3.24
TSG101-203ENST00000535077 TOP2BQ02880 1626 aa35.23■■■■□ 3.23
TSG101-203ENST00000535077 BIVM-ERCC5R4GMW8 1640 aa35.21■■■■□ 3.23
TSG101-203ENST00000535077 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
TSG101-203ENST00000535077 ADAMTS12P58397 1594 aa35■■■■□ 3.19
TSG101-203ENST00000535077 TRHP20396 242 aaPredicted RBP34.99■■■■□ 3.19
TSG101-203ENST00000535077 FHAD1B1AJZ9 1412 aa34.98■■■■□ 3.19
TSG101-203ENST00000535077 ERICH3Q5RHP9 1530 aa34.95■■■■□ 3.19
TSG101-203ENST00000535077 NUP160Q12769 1436 aa34.92■■■■□ 3.18
TSG101-203ENST00000535077 CEP170Q5SW79 1584 aa34.87■■■■□ 3.17
TSG101-203ENST00000535077 ERCC6L2Q5T890 1561 aa34.76■■■■□ 3.16
TSG101-203ENST00000535077 SHROOM2Q13796 1616 aa34.7■■■■□ 3.14
TSG101-203ENST00000535077 KIF27Q86VH2 1401 aa34.61■■■■□ 3.13
TSG101-203ENST00000535077 JPH4Q96JJ6 628 aa34.6■■■■□ 3.13
TSG101-203ENST00000535077 PRG4Q92954 1404 aaPredicted RBP34.58■■■■□ 3.13
TSG101-203ENST00000535077 IGF1RP08069 1367 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms