RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
TPBG-202ENST00000535040 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
TPBG-202ENST00000535040 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.96
TPBG-202ENST00000535040 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
TPBG-202ENST00000535040 ABCC9O60706 1549 aa27.01■■□□□ 1.91
TPBG-202ENST00000535040 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
TPBG-202ENST00000535040 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
TPBG-202ENST00000535040 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
TPBG-202ENST00000535040 NACADO15069 1562 aa26.27■■□□□ 1.8
TPBG-202ENST00000535040 MYO15BQ96JP2 1530 aa26.26■■□□□ 1.79
TPBG-202ENST00000535040 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
TPBG-202ENST00000535040 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
TPBG-202ENST00000535040 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
TPBG-202ENST00000535040 HRCP23327 699 aa25.96■■□□□ 1.75
TPBG-202ENST00000535040 PCGF6Q9BYE7 350 aa25.63■■□□□ 1.69
TPBG-202ENST00000535040 UNC13AQ9UPW8 1703 aa25.58■■□□□ 1.69
TPBG-202ENST00000535040 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
TPBG-202ENST00000535040 PPARGC1BQ86YN6 1023 aaKnown RBP25.35■■□□□ 1.65
TPBG-202ENST00000535040 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
TPBG-202ENST00000535040 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
TPBG-202ENST00000535040 LOC105371045A0A1W2PR82 267 aa25.3■■□□□ 1.64
TPBG-202ENST00000535040 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
TPBG-202ENST00000535040 MROH2BQ7Z745 1585 aa25.12■■□□□ 1.61
TPBG-202ENST00000535040 TRIM26Q12899 539 aaPredicted RBP25.07■■□□□ 1.6
TPBG-202ENST00000535040 BAZ1AQ9NRL2 1556 aaPredicted RBP25.02■■□□□ 1.6
TPBG-202ENST00000535040 WIZO95785 1651 aa24.93■■□□□ 1.58
TPBG-202ENST00000535040 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
TPBG-202ENST00000535040 TRIM41Q8WV44 630 aa24.7■■□□□ 1.55
TPBG-202ENST00000535040 ZEB1P37275 1124 aaPredicted RBP24.68■■□□□ 1.54
TPBG-202ENST00000535040 EIF4G1Q04637 1599 aaKnown RBP24.62■■□□□ 1.53
TPBG-202ENST00000535040 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
TPBG-202ENST00000535040 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
TPBG-202ENST00000535040 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
TPBG-202ENST00000535040 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
TPBG-202ENST00000535040 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
TPBG-202ENST00000535040 PEG3Q9GZU2 1588 aa24.47■■□□□ 1.51
TPBG-202ENST00000535040 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
TPBG-202ENST00000535040 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
TPBG-202ENST00000535040 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
TPBG-202ENST00000535040 NCAPD3P42695 1498 aa24.27■■□□□ 1.48
TPBG-202ENST00000535040 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
TPBG-202ENST00000535040 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
TPBG-202ENST00000535040 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
TPBG-202ENST00000535040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
TPBG-202ENST00000535040 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
TPBG-202ENST00000535040 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
TPBG-202ENST00000535040 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
TPBG-202ENST00000535040 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
TPBG-202ENST00000535040 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
TPBG-202ENST00000535040 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
TPBG-202ENST00000535040 CFTRP13569 1480 aa23.76■■□□□ 1.39
TPBG-202ENST00000535040 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
TPBG-202ENST00000535040 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
TPBG-202ENST00000535040 TNIKQ9UKE5 1360 aa23.7■■□□□ 1.38
TPBG-202ENST00000535040 DIEXFQ68CQ4 756 aaKnown RBP23.7■■□□□ 1.38
TPBG-202ENST00000535040 SOGA1O94964 1423 aa23.69■■□□□ 1.38
TPBG-202ENST00000535040 NESP48681 1621 aa23.67■■□□□ 1.38
TPBG-202ENST00000535040 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
TPBG-202ENST00000535040 EEA1Q15075 1411 aa23.62■■□□□ 1.37
TPBG-202ENST00000535040 TTBK1Q5TCY1 1321 aaPredicted RBP23.61■■□□□ 1.37
TPBG-202ENST00000535040 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.37
TPBG-202ENST00000535040 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
TPBG-202ENST00000535040 CSRNP3Q8WYN3 585 aa23.55■■□□□ 1.36
TPBG-202ENST00000535040 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
TPBG-202ENST00000535040 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
TPBG-202ENST00000535040 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.35
TPBG-202ENST00000535040 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
TPBG-202ENST00000535040 CUX1P39880 1505 aa23.47■■□□□ 1.35
TPBG-202ENST00000535040 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.35
TPBG-202ENST00000535040 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
TPBG-202ENST00000535040 TOP2BQ02880 1626 aa23.45■■□□□ 1.34
TPBG-202ENST00000535040 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
TPBG-202ENST00000535040 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
TPBG-202ENST00000535040 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
TPBG-202ENST00000535040 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
TPBG-202ENST00000535040 KIF21BO75037 1637 aa23.35■■□□□ 1.33
TPBG-202ENST00000535040 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
TPBG-202ENST00000535040 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
TPBG-202ENST00000535040 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
TPBG-202ENST00000535040 CLIP1P30622 1438 aa23.22■■□□□ 1.31
TPBG-202ENST00000535040 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
TPBG-202ENST00000535040 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
TPBG-202ENST00000535040 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
TPBG-202ENST00000535040 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
TPBG-202ENST00000535040 MIER1Q8N108 512 aa23.16■■□□□ 1.3
TPBG-202ENST00000535040 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
TPBG-202ENST00000535040 CUX2O14529 1486 aa23.15■■□□□ 1.3
TPBG-202ENST00000535040 RAD54L2Q9Y4B4 1467 aa23.15■■□□□ 1.3
TPBG-202ENST00000535040 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
TPBG-202ENST00000535040 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
TPBG-202ENST00000535040 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
TPBG-202ENST00000535040 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
TPBG-202ENST00000535040 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
TPBG-202ENST00000535040 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
TPBG-202ENST00000535040 APLP2Q06481 763 aa22.99■■□□□ 1.27
TPBG-202ENST00000535040 MYT1Q01538 1121 aa22.99■■□□□ 1.27
TPBG-202ENST00000535040 TDRD9Q8NDG6 1382 aaKnown RBP22.97■■□□□ 1.27
TPBG-202ENST00000535040 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
TPBG-202ENST00000535040 IGF1RP08069 1367 aa22.92■■□□□ 1.26
TPBG-202ENST00000535040 CLSPNQ9HAW4 1339 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms