RNA–Protein interactions for RNA: ENST00000534843.1

APOLD1-203, Transcript of apolipoprotein L domain containing 1, humanhuman

TSL 2

Gene APOLD1, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOLD1-203ENST00000534843 NISCHQ9Y2I1 1504 aa33.14■■■□□ 2.9
APOLD1-203ENST00000534843 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
APOLD1-203ENST00000534843 ABCC9O60706 1549 aa28.01■■■□□ 2.07
APOLD1-203ENST00000534843 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.06
APOLD1-203ENST00000534843 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
APOLD1-203ENST00000534843 PELP1Q8IZL8 1130 aaKnown RBP27.41■■□□□ 1.98
APOLD1-203ENST00000534843 SHROOM4Q9ULL8 1493 aa27.39■■□□□ 1.98
APOLD1-203ENST00000534843 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
APOLD1-203ENST00000534843 MYT1Q01538 1121 aa27■■□□□ 1.91
APOLD1-203ENST00000534843 NACADO15069 1562 aa26.97■■□□□ 1.91
APOLD1-203ENST00000534843 RB1CC1Q8TDY2 1594 aa26.89■■□□□ 1.9
APOLD1-203ENST00000534843 MYO15BQ96JP2 1530 aa26.87■■□□□ 1.89
APOLD1-203ENST00000534843 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
APOLD1-203ENST00000534843 SUPT5HO00267 1087 aaKnown RBP26.47■■□□□ 1.83
APOLD1-203ENST00000534843 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
APOLD1-203ENST00000534843 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
APOLD1-203ENST00000534843 BICRAQ9NZM4 1560 aa26.21■■□□□ 1.79
APOLD1-203ENST00000534843 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
APOLD1-203ENST00000534843 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
APOLD1-203ENST00000534843 CECR2Q9BXF3 1484 aa25.82■■□□□ 1.72
APOLD1-203ENST00000534843 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
APOLD1-203ENST00000534843 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
APOLD1-203ENST00000534843 WIZO95785 1651 aa25.48■■□□□ 1.67
APOLD1-203ENST00000534843 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
APOLD1-203ENST00000534843 HRCP23327 699 aa25.45■■□□□ 1.66
APOLD1-203ENST00000534843 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
APOLD1-203ENST00000534843 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
APOLD1-203ENST00000534843 DNAJC5BQ9UF47 199 aa25.36■■□□□ 1.65
APOLD1-203ENST00000534843 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
APOLD1-203ENST00000534843 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
APOLD1-203ENST00000534843 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.62
APOLD1-203ENST00000534843 PRKCSHP14314 528 aaPredicted RBP25.07■■□□□ 1.6
APOLD1-203ENST00000534843 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
APOLD1-203ENST00000534843 SMARCA2P51531 1590 aa25■■□□□ 1.59
APOLD1-203ENST00000534843 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
APOLD1-203ENST00000534843 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
APOLD1-203ENST00000534843 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
APOLD1-203ENST00000534843 SCAF1Q9H7N4 1312 aaKnown RBP24.91■■□□□ 1.58
APOLD1-203ENST00000534843 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
APOLD1-203ENST00000534843 TRIM41Q8WV44 630 aa24.79■■□□□ 1.56
APOLD1-203ENST00000534843 ERICH6Q7L0X2 663 aa24.7■■□□□ 1.54
APOLD1-203ENST00000534843 BCL11AQ9H165 835 aa24.61■■□□□ 1.53
APOLD1-203ENST00000534843 APLP2Q06481 763 aa24.6■■□□□ 1.53
APOLD1-203ENST00000534843 LOC105371045A0A1W2PR82 267 aa24.58■■□□□ 1.52
APOLD1-203ENST00000534843 ABCC8Q09428 1581 aa24.57■■□□□ 1.52
APOLD1-203ENST00000534843 PPARGC1BQ86YN6 1023 aaKnown RBP24.51■■□□□ 1.51
APOLD1-203ENST00000534843 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.51
APOLD1-203ENST00000534843 NESP48681 1621 aa24.45■■□□□ 1.5
APOLD1-203ENST00000534843 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
APOLD1-203ENST00000534843 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
APOLD1-203ENST00000534843 CFTRP13569 1480 aa24.27■■□□□ 1.48
APOLD1-203ENST00000534843 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
APOLD1-203ENST00000534843 SOGA1O94964 1423 aa24.17■■□□□ 1.46
APOLD1-203ENST00000534843 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
APOLD1-203ENST00000534843 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
APOLD1-203ENST00000534843 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
APOLD1-203ENST00000534843 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
APOLD1-203ENST00000534843 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
APOLD1-203ENST00000534843 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
APOLD1-203ENST00000534843 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
APOLD1-203ENST00000534843 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
APOLD1-203ENST00000534843 EEA1Q15075 1411 aa24.02■■□□□ 1.44
APOLD1-203ENST00000534843 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
APOLD1-203ENST00000534843 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
APOLD1-203ENST00000534843 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
APOLD1-203ENST00000534843 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
APOLD1-203ENST00000534843 CUX1P39880 1505 aa23.98■■□□□ 1.43
APOLD1-203ENST00000534843 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
APOLD1-203ENST00000534843 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
APOLD1-203ENST00000534843 ACIN1Q9UKV3 1341 aaKnown RBP23.88■■□□□ 1.41
APOLD1-203ENST00000534843 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
APOLD1-203ENST00000534843 PCGF6Q9BYE7 350 aa23.84■■□□□ 1.41
APOLD1-203ENST00000534843 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
APOLD1-203ENST00000534843 GOLGA3Q08378 1498 aa23.76■■□□□ 1.39
APOLD1-203ENST00000534843 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
APOLD1-203ENST00000534843 TOPBP1Q92547 1522 aa23.75■■□□□ 1.39
APOLD1-203ENST00000534843 KIF21BO75037 1637 aa23.74■■□□□ 1.39
APOLD1-203ENST00000534843 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
APOLD1-203ENST00000534843 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
APOLD1-203ENST00000534843 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
APOLD1-203ENST00000534843 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
APOLD1-203ENST00000534843 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
APOLD1-203ENST00000534843 WDR62O43379 1518 aa23.64■■□□□ 1.38
APOLD1-203ENST00000534843 RAPGEF2Q9Y4G8 1499 aa23.64■■□□□ 1.38
APOLD1-203ENST00000534843 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.38
APOLD1-203ENST00000534843 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
APOLD1-203ENST00000534843 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
APOLD1-203ENST00000534843 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
APOLD1-203ENST00000534843 NEUROD1Q13562 356 aa23.59■■□□□ 1.37
APOLD1-203ENST00000534843 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
APOLD1-203ENST00000534843 CUX2O14529 1486 aa23.56■■□□□ 1.36
APOLD1-203ENST00000534843 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
APOLD1-203ENST00000534843 ZEB1P37275 1124 aaPredicted RBP23.53■■□□□ 1.36
APOLD1-203ENST00000534843 ANP32EQ9BTT0 268 aa23.53■■□□□ 1.36
APOLD1-203ENST00000534843 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
APOLD1-203ENST00000534843 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
APOLD1-203ENST00000534843 IGF1RP08069 1367 aa23.46■■□□□ 1.35
APOLD1-203ENST00000534843 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
APOLD1-203ENST00000534843 CLIP1P30622 1438 aa23.43■■□□□ 1.34
APOLD1-203ENST00000534843 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms