RNA–Protein interactions for RNA: ENST00000534488.5

MRPL11-206, Transcript of mitochondrial ribosomal protein L11, humanhuman

TSL 2

Gene MRPL11, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL11-206ENST00000534488 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
MRPL11-206ENST00000534488 CCDC180Q9P1Z9 1646 aa41.78■■■■■ 4.28
MRPL11-206ENST00000534488 ABCC9O60706 1549 aa41.46■■■■■ 4.23
MRPL11-206ENST00000534488 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.94
MRPL11-206ENST00000534488 NACADO15069 1562 aa39.5■■■■□ 3.91
MRPL11-206ENST00000534488 DCAF8L2P0C7V8 631 aa39.43■■■■□ 3.9
MRPL11-206ENST00000534488 MYO15BQ96JP2 1530 aa39.12■■■■□ 3.85
MRPL11-206ENST00000534488 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
MRPL11-206ENST00000534488 DCAF1Q9Y4B6 1507 aa38.75■■■■□ 3.79
MRPL11-206ENST00000534488 PABPN1Q86U42 306 aaKnown RBP eCLIP38.73■■■■□ 3.79
MRPL11-206ENST00000534488 DNAJC5BQ9UF47 199 aa38.62■■■■□ 3.77
MRPL11-206ENST00000534488 UNC13AQ9UPW8 1703 aa38.59■■■■□ 3.77
MRPL11-206ENST00000534488 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
MRPL11-206ENST00000534488 SCRIBQ14160 1630 aa38.09■■■■□ 3.69
MRPL11-206ENST00000534488 SHROOM4Q9ULL8 1493 aa38.05■■■■□ 3.68
MRPL11-206ENST00000534488 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
MRPL11-206ENST00000534488 CC2D2AQ9P2K1 1620 aa37.45■■■■□ 3.59
MRPL11-206ENST00000534488 CECR2Q9BXF3 1484 aa37.34■■■■□ 3.57
MRPL11-206ENST00000534488 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
MRPL11-206ENST00000534488 ATAD2BQ9ULI0 1458 aa36.42■■■■□ 3.42
MRPL11-206ENST00000534488 SMARCA4P51532 1647 aa36.4■■■■□ 3.42
MRPL11-206ENST00000534488 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.41
MRPL11-206ENST00000534488 SMARCA2P51531 1590 aa36.32■■■■□ 3.4
MRPL11-206ENST00000534488 HMGXB3Q12766 1538 aa36.2■■■■□ 3.39
MRPL11-206ENST00000534488 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
MRPL11-206ENST00000534488 MROH2BQ7Z745 1585 aa36.07■■■■□ 3.37
MRPL11-206ENST00000534488 BAZ1BQ9UIG0 1483 aaKnown RBP36.06■■■■□ 3.36
MRPL11-206ENST00000534488 ERCC6Q03468 1493 aa35.79■■■■□ 3.32
MRPL11-206ENST00000534488 NESP48681 1621 aa35.72■■■■□ 3.31
MRPL11-206ENST00000534488 CUX2O14529 1486 aa35.61■■■■□ 3.29
MRPL11-206ENST00000534488 WIZO95785 1651 aa35.6■■■■□ 3.29
MRPL11-206ENST00000534488 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
MRPL11-206ENST00000534488 RSF1Q96T23 1441 aaPredicted RBP35.53■■■■□ 3.28
MRPL11-206ENST00000534488 CADPSQ9ULU8 1353 aa35.42■■■■□ 3.26
MRPL11-206ENST00000534488 PDS5BQ9NTI5 1447 aa35.4■■■■□ 3.26
MRPL11-206ENST00000534488 TOP2AP11388 1531 aaKnown RBP35.23■■■■□ 3.23
MRPL11-206ENST00000534488 THOC2Q8NI27 1593 aaKnown RBP35.23■■■■□ 3.23
MRPL11-206ENST00000534488 DNAJC5Q9H3Z4 198 aa35.22■■■■□ 3.23
MRPL11-206ENST00000534488 KIF21AQ7Z4S6 1674 aa35.18■■■■□ 3.22
MRPL11-206ENST00000534488 CFTRP13569 1480 aa35.08■■■■□ 3.21
MRPL11-206ENST00000534488 MRC2Q9UBG0 1479 aa35.02■■■■□ 3.2
MRPL11-206ENST00000534488 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
MRPL11-206ENST00000534488 CEP164Q9UPV0 1460 aa34.96■■■■□ 3.19
MRPL11-206ENST00000534488 WDR62O43379 1518 aa34.91■■■■□ 3.18
MRPL11-206ENST00000534488 CCDC88BA6NC98 1476 aa34.87■■■■□ 3.17
MRPL11-206ENST00000534488 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
MRPL11-206ENST00000534488 PRDM2Q13029 1718 aa34.56■■■■□ 3.12
MRPL11-206ENST00000534488 ABCC8Q09428 1581 aa34.35■■■■□ 3.09
MRPL11-206ENST00000534488 TOPBP1Q92547 1522 aa34.33■■■■□ 3.09
MRPL11-206ENST00000534488 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
MRPL11-206ENST00000534488 SUPT5HO00267 1087 aaKnown RBP34.25■■■■□ 3.07
MRPL11-206ENST00000534488 DNMBPQ6XZF7 1577 aa34.22■■■■□ 3.07
MRPL11-206ENST00000534488 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
MRPL11-206ENST00000534488 OSCARQ8IYS5 282 aa34.13■■■■□ 3.05
MRPL11-206ENST00000534488 POLA1P09884 1462 aaPredicted RBP34.01■■■■□ 3.04
MRPL11-206ENST00000534488 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
MRPL11-206ENST00000534488 AQRO60306 1485 aaKnown RBP eCLIP33.91■■■■□ 3.02
MRPL11-206ENST00000534488 SOGA1O94964 1423 aa33.91■■■■□ 3.02
MRPL11-206ENST00000534488 EIF4G3O43432 1585 aaKnown RBP33.9■■■■□ 3.02
MRPL11-206ENST00000534488 RAD54L2Q9Y4B4 1467 aa33.88■■■■□ 3.01
MRPL11-206ENST00000534488 CUX1P39880 1505 aa33.86■■■■□ 3.01
MRPL11-206ENST00000534488 FGD5Q6ZNL6 1462 aa33.84■■■■□ 3.01
MRPL11-206ENST00000534488 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
MRPL11-206ENST00000534488 TRIM41Q8WV44 630 aa33.78■■■■□ 3
MRPL11-206ENST00000534488 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
MRPL11-206ENST00000534488 FBLN2P98095 1184 aa33.64■■■□□ 2.98
MRPL11-206ENST00000534488 GRIN2BQ13224 1484 aa33.55■■■□□ 2.96
MRPL11-206ENST00000534488 SNAPC4Q5SXM2 1469 aa33.54■■■□□ 2.96
MRPL11-206ENST00000534488 CHD1O14646 1710 aa33.53■■■□□ 2.96
MRPL11-206ENST00000534488 ABCA10Q8WWZ4 1543 aa33.51■■■□□ 2.95
MRPL11-206ENST00000534488 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
MRPL11-206ENST00000534488 WRNQ14191 1432 aaPredicted RBP eCLIP33.5■■■□□ 2.95
MRPL11-206ENST00000534488 CHMP7Q8WUX9 453 aaPredicted RBP33.49■■■□□ 2.95
MRPL11-206ENST00000534488 RIMBP3CA6NJZ7 1639 aa33.49■■■□□ 2.95
MRPL11-206ENST00000534488 RIMBP3BA6NNM3 1639 aa33.49■■■□□ 2.95
MRPL11-206ENST00000534488 RIMBP3Q9UFD9 1639 aa33.49■■■□□ 2.95
MRPL11-206ENST00000534488 GAPVD1Q14C86 1478 aa33.48■■■□□ 2.95
MRPL11-206ENST00000534488 ARHGEF11O15085 1522 aa33.47■■■□□ 2.95
MRPL11-206ENST00000534488 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
MRPL11-206ENST00000534488 SYNJ2O15056 1496 aa33.39■■■□□ 2.94
MRPL11-206ENST00000534488 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.93
MRPL11-206ENST00000534488 SYNJ1O43426 1573 aa33.37■■■□□ 2.93
MRPL11-206ENST00000534488 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
MRPL11-206ENST00000534488 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
MRPL11-206ENST00000534488 CYB5RLQ6IPT4 315 aa33.28■■■□□ 2.92
MRPL11-206ENST00000534488 CLASP1Q7Z460 1538 aa33.25■■■□□ 2.91
MRPL11-206ENST00000534488 ARAP1Q96P48 1450 aa33.17■■■□□ 2.9
MRPL11-206ENST00000534488 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
MRPL11-206ENST00000534488 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
MRPL11-206ENST00000534488 ERICH3Q5RHP9 1530 aa33.09■■■□□ 2.89
MRPL11-206ENST00000534488 ADAMTS12P58397 1594 aa33.07■■■□□ 2.88
MRPL11-206ENST00000534488 NUP160Q12769 1436 aa33■■■□□ 2.87
MRPL11-206ENST00000534488 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
MRPL11-206ENST00000534488 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
MRPL11-206ENST00000534488 IGF1RP08069 1367 aa32.83■■■□□ 2.85
MRPL11-206ENST00000534488 TRHP20396 242 aaPredicted RBP32.77■■■□□ 2.84
MRPL11-206ENST00000534488 ERCC6L2Q5T890 1561 aa32.74■■■□□ 2.83
MRPL11-206ENST00000534488 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
MRPL11-206ENST00000534488 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
MRPL11-206ENST00000534488 PRG4Q92954 1404 aaPredicted RBP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms