RNA–Protein interactions for RNA: ENST00000534329.1

RPS13-210, Transcript of ribosomal protein S13, humanhuman

TSL 2

Gene RPS13, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-210ENST00000534329 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
RPS13-210ENST00000534329 CCDC180Q9P1Z9 1646 aa30.16■■■□□ 2.42
RPS13-210ENST00000534329 ABCC9O60706 1549 aa29.55■■■□□ 2.32
RPS13-210ENST00000534329 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
RPS13-210ENST00000534329 NACADO15069 1562 aa28.34■■■□□ 2.13
RPS13-210ENST00000534329 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
RPS13-210ENST00000534329 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
RPS13-210ENST00000534329 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
RPS13-210ENST00000534329 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
RPS13-210ENST00000534329 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
RPS13-210ENST00000534329 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
RPS13-210ENST00000534329 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
RPS13-210ENST00000534329 SCRIBQ14160 1630 aa27.54■■■□□ 2
RPS13-210ENST00000534329 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.95
RPS13-210ENST00000534329 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
RPS13-210ENST00000534329 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
RPS13-210ENST00000534329 CC2D2AQ9P2K1 1620 aa26.74■■□□□ 1.87
RPS13-210ENST00000534329 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
RPS13-210ENST00000534329 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
RPS13-210ENST00000534329 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
RPS13-210ENST00000534329 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
RPS13-210ENST00000534329 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
RPS13-210ENST00000534329 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
RPS13-210ENST00000534329 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
RPS13-210ENST00000534329 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
RPS13-210ENST00000534329 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
RPS13-210ENST00000534329 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
RPS13-210ENST00000534329 WIZO95785 1651 aa25.88■■□□□ 1.73
RPS13-210ENST00000534329 RSF1Q96T23 1441 aaPredicted RBP25.82■■□□□ 1.72
RPS13-210ENST00000534329 NESP48681 1621 aa25.59■■□□□ 1.69
RPS13-210ENST00000534329 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
RPS13-210ENST00000534329 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
RPS13-210ENST00000534329 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
RPS13-210ENST00000534329 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
RPS13-210ENST00000534329 KIF21AQ7Z4S6 1674 aa25.3■■□□□ 1.64
RPS13-210ENST00000534329 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
RPS13-210ENST00000534329 PDS5BQ9NTI5 1447 aa25.27■■□□□ 1.64
RPS13-210ENST00000534329 CFTRP13569 1480 aa25.24■■□□□ 1.63
RPS13-210ENST00000534329 THOC2Q8NI27 1593 aaKnown RBP25.22■■□□□ 1.63
RPS13-210ENST00000534329 CUX2O14529 1486 aa25.17■■□□□ 1.62
RPS13-210ENST00000534329 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
RPS13-210ENST00000534329 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
RPS13-210ENST00000534329 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
RPS13-210ENST00000534329 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
RPS13-210ENST00000534329 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
RPS13-210ENST00000534329 WDR62O43379 1518 aa24.99■■□□□ 1.59
RPS13-210ENST00000534329 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
RPS13-210ENST00000534329 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
RPS13-210ENST00000534329 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
RPS13-210ENST00000534329 ABCC8Q09428 1581 aa24.64■■□□□ 1.54
RPS13-210ENST00000534329 CUX1P39880 1505 aa24.54■■□□□ 1.52
RPS13-210ENST00000534329 IFT140Q96RY7 1462 aa24.53■■□□□ 1.52
RPS13-210ENST00000534329 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
RPS13-210ENST00000534329 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
RPS13-210ENST00000534329 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
RPS13-210ENST00000534329 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
RPS13-210ENST00000534329 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
RPS13-210ENST00000534329 RAD54L2Q9Y4B4 1467 aa24.41■■□□□ 1.5
RPS13-210ENST00000534329 EIF4G3O43432 1585 aaKnown RBP24.38■■□□□ 1.49
RPS13-210ENST00000534329 SOGA1O94964 1423 aa24.37■■□□□ 1.49
RPS13-210ENST00000534329 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
RPS13-210ENST00000534329 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
RPS13-210ENST00000534329 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.487e-12■■■■■ 39.2
RPS13-210ENST00000534329 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
RPS13-210ENST00000534329 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
RPS13-210ENST00000534329 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
RPS13-210ENST00000534329 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
RPS13-210ENST00000534329 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
RPS13-210ENST00000534329 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
RPS13-210ENST00000534329 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
RPS13-210ENST00000534329 PBRM1Q86U86 1689 aa24.1■■□□□ 1.45
RPS13-210ENST00000534329 CHD1O14646 1710 aa24.1■■□□□ 1.45
RPS13-210ENST00000534329 GRIN2BQ13224 1484 aa24.09■■□□□ 1.45
RPS13-210ENST00000534329 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
RPS13-210ENST00000534329 OSCARQ8IYS5 282 aa24.09■■□□□ 1.45
RPS13-210ENST00000534329 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
RPS13-210ENST00000534329 FBLN2P98095 1184 aa23.98■■□□□ 1.43
RPS13-210ENST00000534329 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
RPS13-210ENST00000534329 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
RPS13-210ENST00000534329 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.41
RPS13-210ENST00000534329 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
RPS13-210ENST00000534329 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
RPS13-210ENST00000534329 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
RPS13-210ENST00000534329 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
RPS13-210ENST00000534329 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
RPS13-210ENST00000534329 RIMBP3CA6NJZ7 1639 aa23.8■■□□□ 1.4
RPS13-210ENST00000534329 RIMBP3BA6NNM3 1639 aa23.8■■□□□ 1.4
RPS13-210ENST00000534329 RIMBP3Q9UFD9 1639 aa23.8■■□□□ 1.4
RPS13-210ENST00000534329 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
RPS13-210ENST00000534329 IGF1RP08069 1367 aa23.73■■□□□ 1.39
RPS13-210ENST00000534329 CEP170Q5SW79 1584 aa23.72■■□□□ 1.39
RPS13-210ENST00000534329 NUP160Q12769 1436 aa23.7■■□□□ 1.38
RPS13-210ENST00000534329 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
RPS13-210ENST00000534329 CUL7Q14999 1698 aa23.67■■□□□ 1.38
RPS13-210ENST00000534329 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
RPS13-210ENST00000534329 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
RPS13-210ENST00000534329 CARMIL1Q5VZK9 1371 aa23.57■■□□□ 1.36
RPS13-210ENST00000534329 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
RPS13-210ENST00000534329 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
RPS13-210ENST00000534329 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms