RNA–Protein interactions for RNA: ENST00000534270.1

RECQL4-206, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-206ENST00000534270 NISCHQ9Y2I1 1504 aa53.37■■■■■ 6.13
RECQL4-206ENST00000534270 ABCC9O60706 1549 aa47.56■■■■■ 5.2
RECQL4-206ENST00000534270 CCDC180Q9P1Z9 1646 aa47.56■■■■■ 5.2
RECQL4-206ENST00000534270 RB1CC1Q8TDY2 1594 aa45.22■■■■■ 4.83
RECQL4-206ENST00000534270 DCAF8L2P0C7V8 631 aa45.18■■■■■ 4.82
RECQL4-206ENST00000534270 NACADO15069 1562 aa44.99■■■■■ 4.79
RECQL4-206ENST00000534270 DNAJC5BQ9UF47 199 aa44.53■■■■■ 4.72
RECQL4-206ENST00000534270 PABPN1Q86U42 306 aaKnown RBP eCLIP44.47■■■■■ 4.71
RECQL4-206ENST00000534270 MYO15BQ96JP2 1530 aa44.4■■■■■ 4.7
RECQL4-206ENST00000534270 ZCCHC6Q5VYS8 1495 aaKnown RBP44.24■■■■■ 4.67
RECQL4-206ENST00000534270 UNC13AQ9UPW8 1703 aa44.21■■■■■ 4.67
RECQL4-206ENST00000534270 BICRAQ9NZM4 1560 aa43.99■■■■■ 4.63
RECQL4-206ENST00000534270 DCAF1Q9Y4B6 1507 aa43.98■■■■■ 4.63
RECQL4-206ENST00000534270 SCRIBQ14160 1630 aa43.55■■■■■ 4.56
RECQL4-206ENST00000534270 SHROOM4Q9ULL8 1493 aa43.2■■■■■ 4.51
RECQL4-206ENST00000534270 CC2D2AQ9P2K1 1620 aa42.89■■■■■ 4.46
RECQL4-206ENST00000534270 EIF4G1Q04637 1599 aaKnown RBP42.86■■■■■ 4.45
RECQL4-206ENST00000534270 CECR2Q9BXF3 1484 aa42.76■■■■■ 4.44
RECQL4-206ENST00000534270 NCAPD3P42695 1498 aa41.6■■■■■ 4.25
RECQL4-206ENST00000534270 ATAD2BQ9ULI0 1458 aa41.55■■■■■ 4.24
RECQL4-206ENST00000534270 SMARCA4P51532 1647 aa41.51■■■■■ 4.24
RECQL4-206ENST00000534270 SMARCA2P51531 1590 aa41.34■■■■■ 4.21
RECQL4-206ENST00000534270 BAZ1AQ9NRL2 1556 aaPredicted RBP41.33■■■■■ 4.21
RECQL4-206ENST00000534270 HMGXB3Q12766 1538 aa41.22■■■■■ 4.19
RECQL4-206ENST00000534270 MROH2BQ7Z745 1585 aa41.19■■■■■ 4.18
RECQL4-206ENST00000534270 BAZ1BQ9UIG0 1483 aaKnown RBP41.13■■■■■ 4.17
RECQL4-206ENST00000534270 PEG3Q9GZU2 1588 aa41.05■■■■■ 4.16
RECQL4-206ENST00000534270 NESP48681 1621 aa40.97■■■■■ 4.15
RECQL4-206ENST00000534270 ERCC6Q03468 1493 aa40.96■■■■■ 4.15
RECQL4-206ENST00000534270 CUX2O14529 1486 aa40.7■■■■■ 4.11
RECQL4-206ENST00000534270 WIZO95785 1651 aa40.69■■■■■ 4.1
RECQL4-206ENST00000534270 DNAJC5Q9H3Z4 198 aa40.54■■■■■ 4.08
RECQL4-206ENST00000534270 LAMC3Q9Y6N6 1575 aa40.53■■■■■ 4.08
RECQL4-206ENST00000534270 RSF1Q96T23 1441 aaPredicted RBP40.45■■■■■ 4.07
RECQL4-206ENST00000534270 CADPSQ9ULU8 1353 aa40.4■■■■■ 4.06
RECQL4-206ENST00000534270 PDS5BQ9NTI5 1447 aa40.36■■■■■ 4.05
RECQL4-206ENST00000534270 THOC2Q8NI27 1593 aaKnown RBP40.32■■■■■ 4.05
RECQL4-206ENST00000534270 KIF21AQ7Z4S6 1674 aa40.31■■■■■ 4.04
RECQL4-206ENST00000534270 TOP2AP11388 1531 aaKnown RBP40.1■■■■■ 4.01
RECQL4-206ENST00000534270 MRC2Q9UBG0 1479 aa39.99■■■■□ 3.99
RECQL4-206ENST00000534270 CFTRP13569 1480 aa39.96■■■■□ 3.99
RECQL4-206ENST00000534270 FANCD2Q9BXW9 1451 aa39.92■■■■□ 3.98
RECQL4-206ENST00000534270 CEP164Q9UPV0 1460 aa39.88■■■■□ 3.98
RECQL4-206ENST00000534270 WDR62O43379 1518 aa39.85■■■■□ 3.97
RECQL4-206ENST00000534270 CCDC88BA6NC98 1476 aa39.77■■■■□ 3.96
RECQL4-206ENST00000534270 URB2Q14146 1524 aaKnown RBP39.6■■■■□ 3.93
RECQL4-206ENST00000534270 PRDM2Q13029 1718 aa39.4■■■■□ 3.9
RECQL4-206ENST00000534270 TOPBP1Q92547 1522 aa39.19■■■■□ 3.86
RECQL4-206ENST00000534270 ZNF608Q9ULD9 1512 aaPredicted RBP39.11■■■■□ 3.85
RECQL4-206ENST00000534270 IFT140Q96RY7 1462 aa39.08■■■■□ 3.85
RECQL4-206ENST00000534270 OSCARQ8IYS5 282 aa39.07■■■■□ 3.85
RECQL4-206ENST00000534270 SUPT5HO00267 1087 aaKnown RBP39.06■■■■□ 3.84
RECQL4-206ENST00000534270 ABCC8Q09428 1581 aa39.03■■■■□ 3.84
RECQL4-206ENST00000534270 DNMBPQ6XZF7 1577 aa39■■■■□ 3.83
RECQL4-206ENST00000534270 TRIM41Q8WV44 630 aa38.97■■■■□ 3.83
RECQL4-206ENST00000534270 AQRO60306 1485 aaKnown RBP eCLIP38.82■■■■□ 3.814e-8■■■■■ 36.4
RECQL4-206ENST00000534270 POLA1P09884 1462 aaPredicted RBP38.81■■■■□ 3.8
RECQL4-206ENST00000534270 TARBP1Q13395 1621 aaKnown RBP38.78■■■■□ 3.8
RECQL4-206ENST00000534270 RAD54L2Q9Y4B4 1467 aa38.77■■■■□ 3.8
RECQL4-206ENST00000534270 EIF4G3O43432 1585 aaKnown RBP38.77■■■■□ 3.8
RECQL4-206ENST00000534270 SOGA1O94964 1423 aa38.7■■■■□ 3.79
RECQL4-206ENST00000534270 CUX1P39880 1505 aa38.65■■■■□ 3.78
RECQL4-206ENST00000534270 TDRD9Q8NDG6 1382 aaKnown RBP38.65■■■■□ 3.78
RECQL4-206ENST00000534270 FGD5Q6ZNL6 1462 aa38.62■■■■□ 3.77
RECQL4-206ENST00000534270 FBLN2P98095 1184 aa38.56■■■■□ 3.76
RECQL4-206ENST00000534270 CHD1O14646 1710 aa38.43■■■■□ 3.74
RECQL4-206ENST00000534270 RIMBP3CA6NJZ7 1639 aa38.42■■■■□ 3.74
RECQL4-206ENST00000534270 RIMBP3BA6NNM3 1639 aa38.42■■■■□ 3.74
RECQL4-206ENST00000534270 RIMBP3Q9UFD9 1639 aa38.42■■■■□ 3.74
RECQL4-206ENST00000534270 SNAPC4Q5SXM2 1469 aa38.35■■■■□ 3.73
RECQL4-206ENST00000534270 ARHGEF11O15085 1522 aa38.34■■■■□ 3.73
RECQL4-206ENST00000534270 CHMP7Q8WUX9 453 aaPredicted RBP38.26■■■■□ 3.72
RECQL4-206ENST00000534270 GRIN2BQ13224 1484 aa38.25■■■■□ 3.71
RECQL4-206ENST00000534270 WDR97A6NE52 1622 aa38.24■■■■□ 3.71
RECQL4-206ENST00000534270 CYB5RLQ6IPT4 315 aa38.22■■■■□ 3.71
RECQL4-206ENST00000534270 GAPVD1Q14C86 1478 aa38.19■■■■□ 3.7
RECQL4-206ENST00000534270 MAGI1Q96QZ7 1491 aaPredicted RBP38.17■■■■□ 3.7
RECQL4-206ENST00000534270 ABCA10Q8WWZ4 1543 aa38.16■■■■□ 3.7
RECQL4-206ENST00000534270 WRNQ14191 1432 aaPredicted RBP eCLIP38.11■■■■□ 3.69
RECQL4-206ENST00000534270 SYNJ2O15056 1496 aa38.08■■■■□ 3.69
RECQL4-206ENST00000534270 SYNJ1O43426 1573 aa38.06■■■■□ 3.68
RECQL4-206ENST00000534270 PBRM1Q86U86 1689 aa38.04■■■■□ 3.68
RECQL4-206ENST00000534270 TOP2BQ02880 1626 aa38.03■■■■□ 3.68
RECQL4-206ENST00000534270 ABCA5Q8WWZ7 1642 aa38.03■■■■□ 3.68
RECQL4-206ENST00000534270 ARAP1Q96P48 1450 aa38.02■■■■□ 3.68
RECQL4-206ENST00000534270 CLASP1Q7Z460 1538 aa38■■■■□ 3.67
RECQL4-206ENST00000534270 BIVM-ERCC5R4GMW8 1640 aa37.99■■■■□ 3.67
RECQL4-206ENST00000534270 GRIN2AQ12879 1464 aa37.76■■■■□ 3.63
RECQL4-206ENST00000534270 ADAMTS12P58397 1594 aa37.73■■■■□ 3.63
RECQL4-206ENST00000534270 FHAD1B1AJZ9 1412 aa37.69■■■■□ 3.62
RECQL4-206ENST00000534270 TRHP20396 242 aaPredicted RBP37.67■■■■□ 3.62
RECQL4-206ENST00000534270 ERICH3Q5RHP9 1530 aa37.64■■■■□ 3.62
RECQL4-206ENST00000534270 CEP170Q5SW79 1584 aa37.63■■■■□ 3.61
RECQL4-206ENST00000534270 NUP160Q12769 1436 aa37.62■■■■□ 3.61
RECQL4-206ENST00000534270 ERCC6L2Q5T890 1561 aa37.57■■■■□ 3.6
RECQL4-206ENST00000534270 IGF1RP08069 1367 aa37.41■■■■□ 3.58
RECQL4-206ENST00000534270 JPH4Q96JJ6 628 aa37.37■■■■□ 3.57
RECQL4-206ENST00000534270 SHROOM2Q13796 1616 aa37.36■■■■□ 3.57
RECQL4-206ENST00000534270 KIF27Q86VH2 1401 aa37.35■■■■□ 3.57
RECQL4-206ENST00000534270 PRG4Q92954 1404 aaPredicted RBP37.3■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms