RNA–Protein interactions for RNA: ENST00000534182.2

ARCN1-204, Transcript of archain 1, humanhuman

TSL 5 BASIC

Gene ARCN1, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-204ENST00000534182 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
ARCN1-204ENST00000534182 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
ARCN1-204ENST00000534182 ABCC9O60706 1549 aa27.51■■□□□ 1.99
ARCN1-204ENST00000534182 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.84
ARCN1-204ENST00000534182 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
ARCN1-204ENST00000534182 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.81
ARCN1-204ENST00000534182 NACADO15069 1562 aa26.38■■□□□ 1.81
ARCN1-204ENST00000534182 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
ARCN1-204ENST00000534182 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
ARCN1-204ENST00000534182 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
ARCN1-204ENST00000534182 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
ARCN1-204ENST00000534182 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
ARCN1-204ENST00000534182 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
ARCN1-204ENST00000534182 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
ARCN1-204ENST00000534182 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
ARCN1-204ENST00000534182 EIF4G1Q04637 1599 aaKnown RBP24.98■■□□□ 1.59
ARCN1-204ENST00000534182 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
ARCN1-204ENST00000534182 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
ARCN1-204ENST00000534182 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
ARCN1-204ENST00000534182 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
ARCN1-204ENST00000534182 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
ARCN1-204ENST00000534182 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
ARCN1-204ENST00000534182 WIZO95785 1651 aa24.39■■□□□ 1.49
ARCN1-204ENST00000534182 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
ARCN1-204ENST00000534182 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
ARCN1-204ENST00000534182 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
ARCN1-204ENST00000534182 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
ARCN1-204ENST00000534182 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
ARCN1-204ENST00000534182 BAZ1BQ9UIG0 1483 aaKnown RBP24.27■■□□□ 1.48
ARCN1-204ENST00000534182 TOP2AP11388 1531 aaKnown RBP24.03■■□□□ 1.44
ARCN1-204ENST00000534182 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
ARCN1-204ENST00000534182 NESP48681 1621 aa23.93■■□□□ 1.42
ARCN1-204ENST00000534182 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
ARCN1-204ENST00000534182 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
ARCN1-204ENST00000534182 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
ARCN1-204ENST00000534182 CFTRP13569 1480 aa23.61■■□□□ 1.37
ARCN1-204ENST00000534182 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
ARCN1-204ENST00000534182 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
ARCN1-204ENST00000534182 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
ARCN1-204ENST00000534182 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
ARCN1-204ENST00000534182 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
ARCN1-204ENST00000534182 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
ARCN1-204ENST00000534182 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
ARCN1-204ENST00000534182 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
ARCN1-204ENST00000534182 URB2Q14146 1524 aaKnown RBP23.29■■□□□ 1.32
ARCN1-204ENST00000534182 WDR62O43379 1518 aa23.24■■□□□ 1.31
ARCN1-204ENST00000534182 CUX2O14529 1486 aa23.19■■□□□ 1.3
ARCN1-204ENST00000534182 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
ARCN1-204ENST00000534182 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
ARCN1-204ENST00000534182 DNMBPQ6XZF7 1577 aa23.08■■□□□ 1.28
ARCN1-204ENST00000534182 CUX1P39880 1505 aa23.08■■□□□ 1.28
ARCN1-204ENST00000534182 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
ARCN1-204ENST00000534182 POLA1P09884 1462 aaPredicted RBP22.96■■□□□ 1.27
ARCN1-204ENST00000534182 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
ARCN1-204ENST00000534182 WRNQ14191 1432 aaPredicted RBP eCLIP22.92■■□□□ 1.26
ARCN1-204ENST00000534182 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
ARCN1-204ENST00000534182 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
ARCN1-204ENST00000534182 TARBP1Q13395 1621 aaKnown RBP22.88■■□□□ 1.25
ARCN1-204ENST00000534182 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
ARCN1-204ENST00000534182 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
ARCN1-204ENST00000534182 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
ARCN1-204ENST00000534182 SOGA1O94964 1423 aa22.82■■□□□ 1.24
ARCN1-204ENST00000534182 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
ARCN1-204ENST00000534182 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.232e-6■■■■□ 26.7
ARCN1-204ENST00000534182 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
ARCN1-204ENST00000534182 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
ARCN1-204ENST00000534182 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
ARCN1-204ENST00000534182 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
ARCN1-204ENST00000534182 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
ARCN1-204ENST00000534182 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
ARCN1-204ENST00000534182 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
ARCN1-204ENST00000534182 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
ARCN1-204ENST00000534182 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
ARCN1-204ENST00000534182 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
ARCN1-204ENST00000534182 CHD1O14646 1710 aa22.45■■□□□ 1.19
ARCN1-204ENST00000534182 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
ARCN1-204ENST00000534182 FBLN2P98095 1184 aa22.4■■□□□ 1.18
ARCN1-204ENST00000534182 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
ARCN1-204ENST00000534182 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
ARCN1-204ENST00000534182 KIF27Q86VH2 1401 aa22.37■■□□□ 1.17
ARCN1-204ENST00000534182 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
ARCN1-204ENST00000534182 IGF1RP08069 1367 aa22.33■■□□□ 1.17
ARCN1-204ENST00000534182 SYNJ2O15056 1496 aa22.33■■□□□ 1.17
ARCN1-204ENST00000534182 DNAJC5Q9H3Z4 198 aa22.33■■□□□ 1.16
ARCN1-204ENST00000534182 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
ARCN1-204ENST00000534182 OSCARQ8IYS5 282 aa22.29■■□□□ 1.16
ARCN1-204ENST00000534182 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
ARCN1-204ENST00000534182 GRIN2AQ12879 1464 aa22.25■■□□□ 1.15
ARCN1-204ENST00000534182 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
ARCN1-204ENST00000534182 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
ARCN1-204ENST00000534182 CUL7Q14999 1698 aa22.19■■□□□ 1.14
ARCN1-204ENST00000534182 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
ARCN1-204ENST00000534182 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
ARCN1-204ENST00000534182 NUP160Q12769 1436 aa22.13■■□□□ 1.13
ARCN1-204ENST00000534182 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
ARCN1-204ENST00000534182 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
ARCN1-204ENST00000534182 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
ARCN1-204ENST00000534182 RIMBP3CA6NJZ7 1639 aa22.04■■□□□ 1.12
ARCN1-204ENST00000534182 RIMBP3BA6NNM3 1639 aa22.04■■□□□ 1.12
ARCN1-204ENST00000534182 RIMBP3Q9UFD9 1639 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms