RNA–Protein interactions for RNA: ENST00000534078.1

MRPL49-209, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2 BASIC

Gene MRPL49, Length 518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-209ENST00000534078 NISCHQ9Y2I1 1504 aa33.95■■■■□ 3.03
MRPL49-209ENST00000534078 ABCC9O60706 1549 aa31.15■■■□□ 2.58
MRPL49-209ENST00000534078 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
MRPL49-209ENST00000534078 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
MRPL49-209ENST00000534078 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.29
MRPL49-209ENST00000534078 NACADO15069 1562 aa29.09■■■□□ 2.25
MRPL49-209ENST00000534078 PABPN1Q86U42 306 aaKnown RBP eCLIP28.94■■■□□ 2.22
MRPL49-209ENST00000534078 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
MRPL49-209ENST00000534078 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
MRPL49-209ENST00000534078 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
MRPL49-209ENST00000534078 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
MRPL49-209ENST00000534078 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
MRPL49-209ENST00000534078 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
MRPL49-209ENST00000534078 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
MRPL49-209ENST00000534078 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
MRPL49-209ENST00000534078 DCAF1Q9Y4B6 1507 aa27.99■■■□□ 2.07
MRPL49-209ENST00000534078 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.07
MRPL49-209ENST00000534078 SCRIBQ14160 1630 aa27.9■■■□□ 2.06
MRPL49-209ENST00000534078 DNAJC5Q9H3Z4 198 aa27.64■■■□□ 2.02
MRPL49-209ENST00000534078 CUX2O14529 1486 aa27.01■■□□□ 1.91
MRPL49-209ENST00000534078 NCAPD3P42695 1498 aa26.9■■□□□ 1.9
MRPL49-209ENST00000534078 ERCC6Q03468 1493 aa26.82■■□□□ 1.88
MRPL49-209ENST00000534078 ATAD2BQ9ULI0 1458 aa26.74■■□□□ 1.87
MRPL49-209ENST00000534078 NESP48681 1621 aa26.68■■□□□ 1.86
MRPL49-209ENST00000534078 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
MRPL49-209ENST00000534078 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
MRPL49-209ENST00000534078 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
MRPL49-209ENST00000534078 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
MRPL49-209ENST00000534078 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
MRPL49-209ENST00000534078 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
MRPL49-209ENST00000534078 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
MRPL49-209ENST00000534078 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
MRPL49-209ENST00000534078 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
MRPL49-209ENST00000534078 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
MRPL49-209ENST00000534078 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
MRPL49-209ENST00000534078 TRIM41Q8WV44 630 aa26.14■■□□□ 1.78
MRPL49-209ENST00000534078 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
MRPL49-209ENST00000534078 WDR62O43379 1518 aa25.98■■□□□ 1.75
MRPL49-209ENST00000534078 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
MRPL49-209ENST00000534078 WIZO95785 1651 aa25.87■■□□□ 1.73
MRPL49-209ENST00000534078 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
MRPL49-209ENST00000534078 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
MRPL49-209ENST00000534078 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
MRPL49-209ENST00000534078 CFTRP13569 1480 aa25.65■■□□□ 1.7
MRPL49-209ENST00000534078 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
MRPL49-209ENST00000534078 RIMBP3CA6NJZ7 1639 aa25.49■■□□□ 1.67
MRPL49-209ENST00000534078 RIMBP3BA6NNM3 1639 aa25.49■■□□□ 1.67
MRPL49-209ENST00000534078 RIMBP3Q9UFD9 1639 aa25.49■■□□□ 1.67
MRPL49-209ENST00000534078 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
MRPL49-209ENST00000534078 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
MRPL49-209ENST00000534078 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
MRPL49-209ENST00000534078 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
MRPL49-209ENST00000534078 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
MRPL49-209ENST00000534078 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
MRPL49-209ENST00000534078 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
MRPL49-209ENST00000534078 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
MRPL49-209ENST00000534078 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
MRPL49-209ENST00000534078 CYB5RLQ6IPT4 315 aa25.14■■□□□ 1.62
MRPL49-209ENST00000534078 CHD1O14646 1710 aa25.12■■□□□ 1.61
MRPL49-209ENST00000534078 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.6
MRPL49-209ENST00000534078 AQRO60306 1485 aaKnown RBP eCLIP25.07■■□□□ 1.6
MRPL49-209ENST00000534078 ARAP1Q96P48 1450 aa25.07■■□□□ 1.6
MRPL49-209ENST00000534078 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
MRPL49-209ENST00000534078 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
MRPL49-209ENST00000534078 TRHP20396 242 aaPredicted RBP24.95■■□□□ 1.58
MRPL49-209ENST00000534078 POLA1P09884 1462 aaPredicted RBP24.91■■□□□ 1.58
MRPL49-209ENST00000534078 FBLN2P98095 1184 aa24.88■■□□□ 1.57
MRPL49-209ENST00000534078 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
MRPL49-209ENST00000534078 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
MRPL49-209ENST00000534078 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
MRPL49-209ENST00000534078 SOGA1O94964 1423 aa24.77■■□□□ 1.56
MRPL49-209ENST00000534078 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
MRPL49-209ENST00000534078 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
MRPL49-209ENST00000534078 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
MRPL49-209ENST00000534078 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
MRPL49-209ENST00000534078 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
MRPL49-209ENST00000534078 CUX1P39880 1505 aa24.62■■□□□ 1.53
MRPL49-209ENST00000534078 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
MRPL49-209ENST00000534078 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
MRPL49-209ENST00000534078 SYNJ2O15056 1496 aa24.58■■□□□ 1.52
MRPL49-209ENST00000534078 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
MRPL49-209ENST00000534078 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
MRPL49-209ENST00000534078 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
MRPL49-209ENST00000534078 ERCC6L2Q5T890 1561 aa24.45■■□□□ 1.5
MRPL49-209ENST00000534078 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
MRPL49-209ENST00000534078 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
MRPL49-209ENST00000534078 GRIN2AQ12879 1464 aa24.3■■□□□ 1.48
MRPL49-209ENST00000534078 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
MRPL49-209ENST00000534078 NUP160Q12769 1436 aa24.26■■□□□ 1.47
MRPL49-209ENST00000534078 KIF13AQ9H1H9 1805 aa24.25■■□□□ 1.47
MRPL49-209ENST00000534078 SHROOM2Q13796 1616 aa24.24■■□□□ 1.47
MRPL49-209ENST00000534078 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
MRPL49-209ENST00000534078 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
MRPL49-209ENST00000534078 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
MRPL49-209ENST00000534078 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
MRPL49-209ENST00000534078 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
MRPL49-209ENST00000534078 ERICH3Q5RHP9 1530 aa24.03■■□□□ 1.44
MRPL49-209ENST00000534078 PRG4Q92954 1404 aaPredicted RBP24.02■■□□□ 1.44
MRPL49-209ENST00000534078 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
MRPL49-209ENST00000534078 ABCC10Q5T3U5 1492 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms