RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.27
GSDMD-215ENST00000534018 ABCC9O60706 1549 aa37.59■■■■□ 3.61
GSDMD-215ENST00000534018 CCDC180Q9P1Z9 1646 aa37.56■■■■□ 3.6
GSDMD-215ENST00000534018 RB1CC1Q8TDY2 1594 aa35.75■■■■□ 3.31
GSDMD-215ENST00000534018 NACADO15069 1562 aa35.44■■■■□ 3.26
GSDMD-215ENST00000534018 DNAJC5BQ9UF47 199 aa35.26■■■■□ 3.24
GSDMD-215ENST00000534018 DCAF8L2P0C7V8 631 aa35.2■■■■□ 3.23
GSDMD-215ENST00000534018 UNC13AQ9UPW8 1703 aa35.1■■■■□ 3.21
GSDMD-215ENST00000534018 PABPN1Q86U42 306 aaKnown RBP eCLIP34.91■■■■□ 3.18
GSDMD-215ENST00000534018 MYO15BQ96JP2 1530 aa34.87■■■■□ 3.17
GSDMD-215ENST00000534018 BICRAQ9NZM4 1560 aa34.72■■■■□ 3.15
GSDMD-215ENST00000534018 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
GSDMD-215ENST00000534018 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
GSDMD-215ENST00000534018 SCRIBQ14160 1630 aa34.23■■■■□ 3.07
GSDMD-215ENST00000534018 SHROOM4Q9ULL8 1493 aa34.17■■■■□ 3.06
GSDMD-215ENST00000534018 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
GSDMD-215ENST00000534018 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
GSDMD-215ENST00000534018 CECR2Q9BXF3 1484 aa33.84■■■■□ 3.01
GSDMD-215ENST00000534018 NCAPD3P42695 1498 aa32.67■■■□□ 2.82
GSDMD-215ENST00000534018 SMARCA4P51532 1647 aa32.61■■■□□ 2.81
GSDMD-215ENST00000534018 ATAD2BQ9ULI0 1458 aa32.59■■■□□ 2.81
GSDMD-215ENST00000534018 SMARCA2P51531 1590 aa32.52■■■□□ 2.8
GSDMD-215ENST00000534018 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
GSDMD-215ENST00000534018 ERCC6Q03468 1493 aa32.45■■■□□ 2.79
GSDMD-215ENST00000534018 DNAJC5Q9H3Z4 198 aa32.42■■■□□ 2.78
GSDMD-215ENST00000534018 CUX2O14529 1486 aa32.4■■■□□ 2.78
GSDMD-215ENST00000534018 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
GSDMD-215ENST00000534018 BAZ1BQ9UIG0 1483 aaKnown RBP32.3■■■□□ 2.76
GSDMD-215ENST00000534018 NESP48681 1621 aa32.27■■■□□ 2.76
GSDMD-215ENST00000534018 PEG3Q9GZU2 1588 aa32.24■■■□□ 2.75
GSDMD-215ENST00000534018 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
GSDMD-215ENST00000534018 LAMC3Q9Y6N6 1575 aa32.03■■■□□ 2.72
GSDMD-215ENST00000534018 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
GSDMD-215ENST00000534018 KIF21AQ7Z4S6 1674 aa31.96■■■□□ 2.71
GSDMD-215ENST00000534018 WIZO95785 1651 aa31.83■■■□□ 2.69
GSDMD-215ENST00000534018 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
GSDMD-215ENST00000534018 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
GSDMD-215ENST00000534018 MRC2Q9UBG0 1479 aa31.55■■■□□ 2.64
GSDMD-215ENST00000534018 WDR62O43379 1518 aa31.51■■■□□ 2.63
GSDMD-215ENST00000534018 CEP164Q9UPV0 1460 aa31.42■■■□□ 2.62
GSDMD-215ENST00000534018 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
GSDMD-215ENST00000534018 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
GSDMD-215ENST00000534018 FANCD2Q9BXW9 1451 aa31.36■■■□□ 2.61
GSDMD-215ENST00000534018 CFTRP13569 1480 aa31.31■■■□□ 2.6
GSDMD-215ENST00000534018 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
GSDMD-215ENST00000534018 URB2Q14146 1524 aaKnown RBP31.13■■■□□ 2.57
GSDMD-215ENST00000534018 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
GSDMD-215ENST00000534018 CCDC88BA6NC98 1476 aa30.97■■■□□ 2.55
GSDMD-215ENST00000534018 OSCARQ8IYS5 282 aa30.83■■■□□ 2.53
GSDMD-215ENST00000534018 TOPBP1Q92547 1522 aa30.77■■■□□ 2.52
GSDMD-215ENST00000534018 IFT140Q96RY7 1462 aa30.76■■■□□ 2.52
GSDMD-215ENST00000534018 ZNF608Q9ULD9 1512 aaPredicted RBP30.76■■■□□ 2.51
GSDMD-215ENST00000534018 DNMBPQ6XZF7 1577 aa30.67■■■□□ 2.5
GSDMD-215ENST00000534018 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
GSDMD-215ENST00000534018 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
GSDMD-215ENST00000534018 RIMBP3CA6NJZ7 1639 aa30.61■■■□□ 2.49
GSDMD-215ENST00000534018 RIMBP3BA6NNM3 1639 aa30.61■■■□□ 2.49
GSDMD-215ENST00000534018 RIMBP3Q9UFD9 1639 aa30.61■■■□□ 2.49
GSDMD-215ENST00000534018 TARBP1Q13395 1621 aaKnown RBP30.55■■■□□ 2.48
GSDMD-215ENST00000534018 CHD1O14646 1710 aa30.51■■■□□ 2.47
GSDMD-215ENST00000534018 ARHGEF11O15085 1522 aa30.45■■■□□ 2.47
GSDMD-215ENST00000534018 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
GSDMD-215ENST00000534018 POLA1P09884 1462 aaPredicted RBP30.44■■■□□ 2.46
GSDMD-215ENST00000534018 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
GSDMD-215ENST00000534018 SOGA1O94964 1423 aa30.26■■■□□ 2.43
GSDMD-215ENST00000534018 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
GSDMD-215ENST00000534018 FBLN2P98095 1184 aa30.25■■■□□ 2.43
GSDMD-215ENST00000534018 CUX1P39880 1505 aa30.22■■■□□ 2.43
GSDMD-215ENST00000534018 TDRD9Q8NDG6 1382 aaKnown RBP30.22■■■□□ 2.43
GSDMD-215ENST00000534018 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
GSDMD-215ENST00000534018 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
GSDMD-215ENST00000534018 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
GSDMD-215ENST00000534018 ARAP1Q96P48 1450 aa30.13■■■□□ 2.41
GSDMD-215ENST00000534018 PBRM1Q86U86 1689 aa30.07■■■□□ 2.41
GSDMD-215ENST00000534018 CLASP1Q7Z460 1538 aa30.05■■■□□ 2.4
GSDMD-215ENST00000534018 MAGI1Q96QZ7 1491 aaPredicted RBP30.05■■■□□ 2.4
GSDMD-215ENST00000534018 GRIN2BQ13224 1484 aa30.03■■■□□ 2.4
GSDMD-215ENST00000534018 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
GSDMD-215ENST00000534018 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
GSDMD-215ENST00000534018 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
GSDMD-215ENST00000534018 SUPT5HO00267 1087 aaKnown RBP29.93■■■□□ 2.38
GSDMD-215ENST00000534018 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
GSDMD-215ENST00000534018 GAPVD1Q14C86 1478 aa29.92■■■□□ 2.38
GSDMD-215ENST00000534018 ABCA10Q8WWZ4 1543 aa29.88■■■□□ 2.37
GSDMD-215ENST00000534018 TRHP20396 242 aaPredicted RBP29.87■■■□□ 2.37
GSDMD-215ENST00000534018 BIVM-ERCC5R4GMW8 1640 aa29.77■■■□□ 2.36
GSDMD-215ENST00000534018 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
GSDMD-215ENST00000534018 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
GSDMD-215ENST00000534018 ADAMTS12P58397 1594 aa29.7■■■□□ 2.35
GSDMD-215ENST00000534018 GRIN2AQ12879 1464 aa29.67■■■□□ 2.34
GSDMD-215ENST00000534018 CEP170Q5SW79 1584 aa29.62■■■□□ 2.33
GSDMD-215ENST00000534018 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
GSDMD-215ENST00000534018 NUP160Q12769 1436 aa29.54■■■□□ 2.32
GSDMD-215ENST00000534018 ERICH3Q5RHP9 1530 aa29.51■■■□□ 2.32
GSDMD-215ENST00000534018 FHAD1B1AJZ9 1412 aa29.51■■■□□ 2.31
GSDMD-215ENST00000534018 SHROOM2Q13796 1616 aa29.5■■■□□ 2.31
GSDMD-215ENST00000534018 RUSC2Q8N2Y8 1516 aa29.3■■■□□ 2.28
GSDMD-215ENST00000534018 PRG4Q92954 1404 aaPredicted RBP29.27■■■□□ 2.28
GSDMD-215ENST00000534018 KIF13AQ9H1H9 1805 aa29.24■■■□□ 2.27
GSDMD-215ENST00000534018 JPH4Q96JJ6 628 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms