RNA–Protein interactions for RNA: ENST00000533898.5

RCN1-211, Transcript of reticulocalbin 1, humanhuman

TSL 2

Gene RCN1, Length 2,416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-211ENST00000533898 CHIC1Q5VXU3 224 aa10.76□□□□□ -0.69
RCN1-211ENST00000533898 AEBP2Q6ZN18 517 aaPredicted RBP10.6□□□□□ -0.71
RCN1-211ENST00000533898 NISCHQ9Y2I1 1504 aa9.86□□□□□ -0.83
RCN1-211ENST00000533898 PHF23Q9BUL5 403 aaPredicted RBP9.75□□□□□ -0.85
RCN1-211ENST00000533898 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
RCN1-211ENST00000533898 PLPPR3Q6T4P5 718 aa8.96□□□□□ -0.97
RCN1-211ENST00000533898 KCNA4P22459 653 aa8.87□□□□□ -0.99
RCN1-211ENST00000533898 SENP3Q9H4L4 574 aaPredicted RBP8.78□□□□□ -1
RCN1-211ENST00000533898 ADRA2BP18089 450 aa8.75□□□□□ -1.01
RCN1-211ENST00000533898 CSRNP3Q8WYN3 585 aa8.66□□□□□ -1.02
RCN1-211ENST00000533898 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
RCN1-211ENST00000533898 SLC24A1O60721 1099 aa8.64□□□□□ -1.03
RCN1-211ENST00000533898 POTEDQ86YR6 584 aa8.6□□□□□ -1.03
RCN1-211ENST00000533898 ABCC9O60706 1549 aa8.59□□□□□ -1.04
RCN1-211ENST00000533898 PPP6R1Q9UPN7 881 aa8.46□□□□□ -1.06
RCN1-211ENST00000533898 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
RCN1-211ENST00000533898 SLC4A1APQ9BWU0 796 aaKnown RBP8.4□□□□□ -1.06
RCN1-211ENST00000533898 DCAF8L2P0C7V8 631 aa8.28□□□□□ -1.08
RCN1-211ENST00000533898 ZBTB22O15209 634 aa8.27□□□□□ -1.09
RCN1-211ENST00000533898 ZCCHC6Q5VYS8 1495 aaKnown RBP8.23□□□□□ -1.09
RCN1-211ENST00000533898 RB1CC1Q8TDY2 1594 aa8.14□□□□□ -1.11
RCN1-211ENST00000533898 NACADO15069 1562 aa8.13□□□□□ -1.11
RCN1-211ENST00000533898 PPP4R3CPQ6ZMV5 832 aa8.09□□□□□ -1.11
RCN1-211ENST00000533898 FOXD1Q16676 465 aa8.08□□□□□ -1.12
RCN1-211ENST00000533898 DCAF1Q9Y4B6 1507 aa8.07□□□□□ -1.12
RCN1-211ENST00000533898 AMER1Q5JTC6 1135 aaPredicted RBP8.07□□□□□ -1.12
RCN1-211ENST00000533898 UNC13AQ9UPW8 1703 aa8.07□□□□□ -1.12
RCN1-211ENST00000533898 PABPN1Q86U42 306 aaKnown RBP eCLIP8.06□□□□□ -1.121e-11■■■■■ 42.3
RCN1-211ENST00000533898 MYO15BQ96JP2 1530 aa8.06□□□□□ -1.12
RCN1-211ENST00000533898 SCRIBQ14160 1630 aa8.05□□□□□ -1.12
RCN1-211ENST00000533898 NPM3O75607 178 aaKnown RBP8.03□□□□□ -1.12
RCN1-211ENST00000533898 BICRAQ9NZM4 1560 aa8.01□□□□□ -1.13
RCN1-211ENST00000533898 MSH5O43196 834 aa8□□□□□ -1.13
RCN1-211ENST00000533898 SHROOM4Q9ULL8 1493 aa7.96□□□□□ -1.13
RCN1-211ENST00000533898 DNAJC5BQ9UF47 199 aa7.91□□□□□ -1.14
RCN1-211ENST00000533898 PRKCSHP14314 528 aaPredicted RBP7.84□□□□□ -1.15
RCN1-211ENST00000533898 NCBP3Q53F19 620 aaKnown RBP7.83□□□□□ -1.16
RCN1-211ENST00000533898 CECR2Q9BXF3 1484 aa7.77□□□□□ -1.17
RCN1-211ENST00000533898 FKBP8Q14318 412 aa7.77□□□□□ -1.17
RCN1-211ENST00000533898 EIF4G1Q04637 1599 aaKnown RBP7.75□□□□□ -1.17
RCN1-211ENST00000533898 PIAS4Q8N2W9 510 aaPredicted RBP7.75□□□□□ -1.17
RCN1-211ENST00000533898 FOXD4L1Q9NU39 408 aa7.73□□□□□ -1.17
RCN1-211ENST00000533898 CC2D2AQ9P2K1 1620 aa7.73□□□□□ -1.17
RCN1-211ENST00000533898 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
RCN1-211ENST00000533898 SMARCA4P51532 1647 aa7.64□□□□□ -1.19
RCN1-211ENST00000533898 ATAD2BQ9ULI0 1458 aa7.59□□□□□ -1.19
RCN1-211ENST00000533898 BAZ1AQ9NRL2 1556 aaPredicted RBP7.59□□□□□ -1.19
RCN1-211ENST00000533898 CNKSR2Q8WXI2 1034 aa7.59□□□□□ -1.19
RCN1-211ENST00000533898 WIZO95785 1651 aa7.58□□□□□ -1.2
RCN1-211ENST00000533898 RSF1Q96T23 1441 aaPredicted RBP7.56□□□□□ -1.2
RCN1-211ENST00000533898 PLCB2Q00722 1185 aa7.54□□□□□ -1.2
RCN1-211ENST00000533898 NCAPD3P42695 1498 aa7.54□□□□□ -1.2
RCN1-211ENST00000533898 PEG3Q9GZU2 1588 aa7.53□□□□□ -1.2
RCN1-211ENST00000533898 MAPK8IP2Q13387 824 aaPredicted RBP7.52□□□□□ -1.2
RCN1-211ENST00000533898 BAZ1BQ9UIG0 1483 aaKnown RBP7.52□□□□□ -1.21
RCN1-211ENST00000533898 SMARCA2P51531 1590 aa7.52□□□□□ -1.21
RCN1-211ENST00000533898 TAOK2Q9UL54 1235 aa7.51□□□□□ -1.21
RCN1-211ENST00000533898 HAP1P54257 671 aaPredicted RBP7.5□□□□□ -1.21
RCN1-211ENST00000533898 HMGXB3Q12766 1538 aa7.49□□□□□ -1.21
RCN1-211ENST00000533898 NESP48681 1621 aa7.48□□□□□ -1.21
RCN1-211ENST00000533898 SLC4A2P04920 1241 aa7.47□□□□□ -1.21
RCN1-211ENST00000533898 SUPT5HO00267 1087 aaKnown RBP7.46□□□□□ -1.22
RCN1-211ENST00000533898 TPRNQ4KMQ1 711 aa7.45□□□□□ -1.22
RCN1-211ENST00000533898 TOP2AP11388 1531 aaKnown RBP7.43□□□□□ -1.22
RCN1-211ENST00000533898 TIMELESSQ9UNS1 1208 aa7.41□□□□□ -1.22
RCN1-211ENST00000533898 BCANQ96GW7 911 aa7.4□□□□□ -1.23
RCN1-211ENST00000533898 CCDC88BA6NC98 1476 aa7.39□□□□□ -1.23
RCN1-211ENST00000533898 DNAJC5Q9H3Z4 198 aa7.38□□□□□ -1.23
RCN1-211ENST00000533898 FBLN2P98095 1184 aa7.36□□□□□ -1.23
RCN1-211ENST00000533898 KDM2AQ9Y2K7 1162 aa7.35□□□□□ -1.23
RCN1-211ENST00000533898 ATF5Q9Y2D1 282 aaPredicted RBP7.34□□□□□ -1.23
RCN1-211ENST00000533898 KIF21AQ7Z4S6 1674 aa7.34□□□□□ -1.24
RCN1-211ENST00000533898 CADPSQ9ULU8 1353 aa7.33□□□□□ -1.24
RCN1-211ENST00000533898 ERCC6Q03468 1493 aa7.32□□□□□ -1.24
RCN1-211ENST00000533898 TULP1O00294 542 aaPredicted RBP7.31□□□□□ -1.24
RCN1-211ENST00000533898 CFTRP13569 1480 aa7.31□□□□□ -1.24
RCN1-211ENST00000533898 LAMC3Q9Y6N6 1575 aa7.31□□□□□ -1.24
RCN1-211ENST00000533898 THOC2Q8NI27 1593 aaKnown RBP7.29□□□□□ -1.24
RCN1-211ENST00000533898 SCAF1Q9H7N4 1312 aaKnown RBP7.28□□□□□ -1.24
RCN1-211ENST00000533898 FANCD2Q9BXW9 1451 aa7.28□□□□□ -1.24
RCN1-211ENST00000533898 RNF216Q9NWF9 866 aaPredicted RBP7.27□□□□□ -1.25
RCN1-211ENST00000533898 PDS5BQ9NTI5 1447 aa7.25□□□□□ -1.25
RCN1-211ENST00000533898 URB2Q14146 1524 aaKnown RBP7.25□□□□□ -1.25
RCN1-211ENST00000533898 CEP164Q9UPV0 1460 aa7.24□□□□□ -1.25
RCN1-211ENST00000533898 MYCNP04198 464 aaPredicted RBP7.23□□□□□ -1.25
RCN1-211ENST00000533898 DAXXQ9UER7 740 aaPredicted RBP7.22□□□□□ -1.25
RCN1-211ENST00000533898 PRDM2Q13029 1718 aa7.21□□□□□ -1.25
RCN1-211ENST00000533898 MRC2Q9UBG0 1479 aa7.21□□□□□ -1.25
RCN1-211ENST00000533898 ATXN8OSP0DMR3 200 aa7.21□□□□□ -1.26
RCN1-211ENST00000533898 ABCC8Q09428 1581 aa7.2□□□□□ -1.26
RCN1-211ENST00000533898 WDR62O43379 1518 aa7.2□□□□□ -1.26
RCN1-211ENST00000533898 PKD2Q13563 968 aa7.19□□□□□ -1.26
RCN1-211ENST00000533898 VSIG10Q8N0Z9 540 aa7.18□□□□□ -1.26
RCN1-211ENST00000533898 CUX1P39880 1505 aa7.18□□□□□ -1.26
RCN1-211ENST00000533898 CUX2O14529 1486 aa7.18□□□□□ -1.26
RCN1-211ENST00000533898 TOPBP1Q92547 1522 aa7.17□□□□□ -1.26
RCN1-211ENST00000533898 IFNLR1Q8IU57 520 aaPredicted RBP7.17□□□□□ -1.26
RCN1-211ENST00000533898 ZNF608Q9ULD9 1512 aaPredicted RBP7.16□□□□□ -1.26
RCN1-211ENST00000533898 NPM1P06748 294 aaKnown RBP eCLIP7.16□□□□□ -1.26
RCN1-211ENST00000533898 SYNJ1O43426 1573 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms