RNA–Protein interactions for RNA: ENST00000533888.1

GSDMD-214, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-214ENST00000533888 NISCHQ9Y2I1 1504 aa39.51■■■■□ 3.92
GSDMD-214ENST00000533888 CCDC180Q9P1Z9 1646 aa35.4■■■■□ 3.26
GSDMD-214ENST00000533888 ABCC9O60706 1549 aa35.38■■■■□ 3.25
GSDMD-214ENST00000533888 RB1CC1Q8TDY2 1594 aa33.64■■■□□ 2.98
GSDMD-214ENST00000533888 NACADO15069 1562 aa33.43■■■□□ 2.94
GSDMD-214ENST00000533888 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
GSDMD-214ENST00000533888 DNAJC5BQ9UF47 199 aa33.19■■■□□ 2.9
GSDMD-214ENST00000533888 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
GSDMD-214ENST00000533888 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
GSDMD-214ENST00000533888 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
GSDMD-214ENST00000533888 ZCCHC6Q5VYS8 1495 aaKnown RBP32.78■■■□□ 2.84
GSDMD-214ENST00000533888 BICRAQ9NZM4 1560 aa32.76■■■□□ 2.84
GSDMD-214ENST00000533888 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
GSDMD-214ENST00000533888 SCRIBQ14160 1630 aa32.31■■■□□ 2.76
GSDMD-214ENST00000533888 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
GSDMD-214ENST00000533888 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
GSDMD-214ENST00000533888 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
GSDMD-214ENST00000533888 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
GSDMD-214ENST00000533888 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
GSDMD-214ENST00000533888 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
GSDMD-214ENST00000533888 SMARCA4P51532 1647 aa30.82■■■□□ 2.52
GSDMD-214ENST00000533888 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
GSDMD-214ENST00000533888 HMGXB3Q12766 1538 aa30.66■■■□□ 2.5
GSDMD-214ENST00000533888 BAZ1AQ9NRL2 1556 aaPredicted RBP30.62■■■□□ 2.49
GSDMD-214ENST00000533888 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
GSDMD-214ENST00000533888 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
GSDMD-214ENST00000533888 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
GSDMD-214ENST00000533888 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
GSDMD-214ENST00000533888 NESP48681 1621 aa30.45■■■□□ 2.47
GSDMD-214ENST00000533888 CUX2O14529 1486 aa30.41■■■□□ 2.46
GSDMD-214ENST00000533888 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
GSDMD-214ENST00000533888 LAMC3Q9Y6N6 1575 aa30.16■■■□□ 2.42
GSDMD-214ENST00000533888 WIZO95785 1651 aa30.13■■■□□ 2.41
GSDMD-214ENST00000533888 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
GSDMD-214ENST00000533888 KIF21AQ7Z4S6 1674 aa30.05■■■□□ 2.4
GSDMD-214ENST00000533888 PDS5BQ9NTI5 1447 aa29.96■■■□□ 2.39
GSDMD-214ENST00000533888 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
GSDMD-214ENST00000533888 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
GSDMD-214ENST00000533888 MRC2Q9UBG0 1479 aa29.74■■■□□ 2.35
GSDMD-214ENST00000533888 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
GSDMD-214ENST00000533888 WDR62O43379 1518 aa29.68■■■□□ 2.34
GSDMD-214ENST00000533888 CFTRP13569 1480 aa29.63■■■□□ 2.33
GSDMD-214ENST00000533888 CEP164Q9UPV0 1460 aa29.62■■■□□ 2.33
GSDMD-214ENST00000533888 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
GSDMD-214ENST00000533888 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
GSDMD-214ENST00000533888 CCDC88BA6NC98 1476 aa29.39■■■□□ 2.3
GSDMD-214ENST00000533888 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
GSDMD-214ENST00000533888 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
GSDMD-214ENST00000533888 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
GSDMD-214ENST00000533888 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
GSDMD-214ENST00000533888 IFT140Q96RY7 1462 aa29.03■■■□□ 2.24
GSDMD-214ENST00000533888 OSCARQ8IYS5 282 aa29■■■□□ 2.23
GSDMD-214ENST00000533888 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
GSDMD-214ENST00000533888 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
GSDMD-214ENST00000533888 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
GSDMD-214ENST00000533888 TARBP1Q13395 1621 aaKnown RBP28.84■■■□□ 2.21
GSDMD-214ENST00000533888 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
GSDMD-214ENST00000533888 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
GSDMD-214ENST00000533888 RIMBP3CA6NJZ7 1639 aa28.71■■■□□ 2.19
GSDMD-214ENST00000533888 RIMBP3BA6NNM3 1639 aa28.71■■■□□ 2.19
GSDMD-214ENST00000533888 RIMBP3Q9UFD9 1639 aa28.71■■■□□ 2.19
GSDMD-214ENST00000533888 RAD54L2Q9Y4B4 1467 aa28.71■■■□□ 2.19
GSDMD-214ENST00000533888 CHD1O14646 1710 aa28.65■■■□□ 2.18
GSDMD-214ENST00000533888 CUX1P39880 1505 aa28.64■■■□□ 2.17
GSDMD-214ENST00000533888 SOGA1O94964 1423 aa28.62■■■□□ 2.17
GSDMD-214ENST00000533888 FGD5Q6ZNL6 1462 aa28.62■■■□□ 2.17
GSDMD-214ENST00000533888 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
GSDMD-214ENST00000533888 TDRD9Q8NDG6 1382 aaKnown RBP28.59■■■□□ 2.17
GSDMD-214ENST00000533888 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
GSDMD-214ENST00000533888 FBLN2P98095 1184 aa28.5■■■□□ 2.15
GSDMD-214ENST00000533888 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
GSDMD-214ENST00000533888 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
GSDMD-214ENST00000533888 GRIN2BQ13224 1484 aa28.37■■■□□ 2.13
GSDMD-214ENST00000533888 ARAP1Q96P48 1450 aa28.36■■■□□ 2.13
GSDMD-214ENST00000533888 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
GSDMD-214ENST00000533888 MAGI1Q96QZ7 1491 aaPredicted RBP28.35■■■□□ 2.13
GSDMD-214ENST00000533888 CLASP1Q7Z460 1538 aa28.32■■■□□ 2.12
GSDMD-214ENST00000533888 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
GSDMD-214ENST00000533888 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
GSDMD-214ENST00000533888 ABCA10Q8WWZ4 1543 aa28.28■■■□□ 2.12
GSDMD-214ENST00000533888 GAPVD1Q14C86 1478 aa28.28■■■□□ 2.12
GSDMD-214ENST00000533888 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
GSDMD-214ENST00000533888 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
GSDMD-214ENST00000533888 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
GSDMD-214ENST00000533888 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
GSDMD-214ENST00000533888 TOP2BQ02880 1626 aa28.16■■■□□ 2.1
GSDMD-214ENST00000533888 WRNQ14191 1432 aaPredicted RBP eCLIP28.14■■■□□ 2.1
GSDMD-214ENST00000533888 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
GSDMD-214ENST00000533888 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
GSDMD-214ENST00000533888 TRHP20396 242 aaPredicted RBP27.98■■■□□ 2.07
GSDMD-214ENST00000533888 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
GSDMD-214ENST00000533888 ERCC6L2Q5T890 1561 aa27.94■■■□□ 2.06
GSDMD-214ENST00000533888 NUP160Q12769 1436 aa27.93■■■□□ 2.06
GSDMD-214ENST00000533888 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
GSDMD-214ENST00000533888 ERICH3Q5RHP9 1530 aa27.91■■■□□ 2.06
GSDMD-214ENST00000533888 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
GSDMD-214ENST00000533888 RUSC2Q8N2Y8 1516 aa27.65■■■□□ 2.02
GSDMD-214ENST00000533888 PRG4Q92954 1404 aaPredicted RBP27.65■■■□□ 2.02
GSDMD-214ENST00000533888 JPH4Q96JJ6 628 aa27.61■■■□□ 2.01
GSDMD-214ENST00000533888 IGF1RP08069 1367 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms