RNA–Protein interactions for RNA: ENST00000533540.5

HSPA8-221, Transcript of heat shock protein family A (Hsp70) member 8, humanhuman

TSL 5 BASIC

Gene HSPA8, Length 1,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA8-221ENST00000533540 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.94□□□□□ -0.345e-76■□□□□ 9.6
HSPA8-221ENST00000533540 DDX21Q9NR30 783 aaKnown RBP eCLIP17.54■□□□□ 0.42e-70■■□□□ 12.7
HSPA8-221ENST00000533540 WDR43Q15061 677 aaKnown RBP eCLIP18.41■□□□□ 0.545e-66■□□□□ 10.9
HSPA8-221ENST00000533540 DKC1O60832 514 aaKnown RBP eCLIP15.29■□□□□ 0.041e-61■□□□□ 10.4
HSPA8-221ENST00000533540 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.76□□□□□ -0.213e-47■□□□□ 11.2
HSPA8-221ENST00000533540 SRSF9Q13242 221 aaKnown RBP eCLIP8.88□□□□□ -0.991e-45■■■■□ 25.2
HSPA8-221ENST00000533540 TROVE2P10155 538 aaKnown RBP eCLIP13.24□□□□□ -0.294e-40■□□□□ 10
HSPA8-221ENST00000533540 AATFQ9NY61 560 aaKnown RBP eCLIP16.52■□□□□ 0.231e-38■■■□□ 19.2
HSPA8-221ENST00000533540 PTBP1P26599 531 aaKnown RBP eCLIP11.45□□□□□ -0.585e-37■□□□□ 10.7
HSPA8-221ENST00000533540 SMNDC1O75940 238 aaKnown RBP eCLIP12.28□□□□□ -0.443e-35■■■■■ 27.3
HSPA8-221ENST00000533540 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.331e-32■■■■■ 68.5
HSPA8-221ENST00000533540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.93□□□□□ -0.345e-27■□□□□ 10.8
HSPA8-221ENST00000533540 DDX3XO00571 662 aaKnown RBP eCLIP14.64□□□□□ -0.071e-26■□□□□ 10.7
HSPA8-221ENST00000533540 NIP7Q9Y221 180 aaKnown RBP eCLIP17.27■□□□□ 0.363e-26■□□□□ 9.3
HSPA8-221ENST00000533540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.97□□□□□ -0.011e-23■■□□□ 11.8
HSPA8-221ENST00000533540 SND1Q7KZF4 910 aaKnown RBP eCLIP14.29□□□□□ -0.121e-21■■□□□ 13.8
HSPA8-221ENST00000533540 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.77□□□□□ -0.051e-20■□□□□ 10.4
HSPA8-221ENST00000533540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.37□□□□□ -0.432e-16■■□□□ 12.1
HSPA8-221ENST00000533540 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.34e-16■□□□□ 8.7
HSPA8-221ENST00000533540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.82□□□□□ -0.045e-16■■■□□ 15.7
HSPA8-221ENST00000533540 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.01□□□□□ -0.339e-16■■■□□ 15.3
HSPA8-221ENST00000533540 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.012e-15■□□□□ 8.2
HSPA8-221ENST00000533540 YBX3P16989 372 aaKnown RBP eCLIP16.61■□□□□ 0.255e-15■□□□□ 11.3
HSPA8-221ENST00000533540 EFTUD2Q15029 972 aaKnown RBP eCLIP13.8□□□□□ -0.29e-13■■■■■ 38
HSPA8-221ENST00000533540 FMR1Q06787 632 aaKnown RBP eCLIP16.15■□□□□ 0.185e-12■■■□□ 15.7
HSPA8-221ENST00000533540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.08□□□□□ -0.154e-11■■■□□ 18.4
HSPA8-221ENST00000533540 U2AF2P26368 475 aaKnown RBP eCLIP15.76■□□□□ 0.117e-11■■■■□ 20.6
HSPA8-221ENST00000533540 NOLC1Q14978 699 aaKnown RBP eCLIP14.99□□□□□ -0.017e-11■■■■□ 25.5
HSPA8-221ENST00000533540 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.249e-11■■■■□ 24.7
HSPA8-221ENST00000533540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.83□□□□□ -0.21e-10■■■■■ 47.2
HSPA8-221ENST00000533540 ZRANB2O95218 330 aaKnown RBP eCLIP14.27□□□□□ -0.121e-10■■■■■ 40
HSPA8-221ENST00000533540 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.535e-10■□□□□ 10.8
HSPA8-221ENST00000533540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.8□□□□□ -0.27e-10■□□□□ 10.3
HSPA8-221ENST00000533540 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.317e-10■■■■■ 33.4
HSPA8-221ENST00000533540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.85□□□□□ -0.032e-9■■□□□ 13.3
HSPA8-221ENST00000533540 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.072e-9■■□□□ 13.7
HSPA8-221ENST00000533540 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.693e-9■■■□□ 18.6
HSPA8-221ENST00000533540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.853e-9■■■■□ 26.4
HSPA8-221ENST00000533540 CDC40O60508 579 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■□□□ 13.2
HSPA8-221ENST00000533540 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.322e-8■■■□□ 16.7
HSPA8-221ENST00000533540 FXR1P51114 621 aaKnown RBP eCLIP14.84□□□□□ -0.032e-8■■■□□ 16.6
HSPA8-221ENST00000533540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.463e-8■■■■□ 22.2
HSPA8-221ENST00000533540 PUM1Q14671 1186 aaKnown RBP eCLIP12.78□□□□□ -0.363e-8■□□□□ 10.6
HSPA8-221ENST00000533540 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.216e-8■■■■□ 23.2
HSPA8-221ENST00000533540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.18□□□□□ -0.626e-8■■■■■ 41.2
HSPA8-221ENST00000533540 EIF3HO15372 352 aaKnown RBP eCLIP13.82□□□□□ -0.26e-8■□□□□ 9.5
HSPA8-221ENST00000533540 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.37e-8■■□□□ 14
HSPA8-221ENST00000533540 SLBPQ14493 270 aaKnown RBP eCLIP13.24□□□□□ -0.298e-8■□□□□ 9
HSPA8-221ENST00000533540 RBM15Q96T37 977 aaKnown RBP eCLIP13.98□□□□□ -0.179e-8■■■■□ 26.5
HSPA8-221ENST00000533540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.94□□□□□ -0.021e-7■■■■■ 37.9
HSPA8-221ENST00000533540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.03■□□□□ 0.961e-7■■□□□ 12.6
HSPA8-221ENST00000533540 SF3B4Q15427 424 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■■□ 24.8
HSPA8-221ENST00000533540 FTOQ9C0B1 505 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■□□□□ 8.6
HSPA8-221ENST00000533540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.39□□□□□ -0.113e-7■□□□□ 9
HSPA8-221ENST00000533540 SF3B1O75533 1304 aaKnown RBP eCLIP14.62□□□□□ -0.073e-7■■■■■ 31
HSPA8-221ENST00000533540 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.714e-7■□□□□ 9.6
HSPA8-221ENST00000533540 SUB1P53999 127 aaKnown RBP eCLIP10.77□□□□□ -0.685e-7■■□□□ 12.9
HSPA8-221ENST00000533540 DDX6P26196 483 aaKnown RBP eCLIP14.2□□□□□ -0.146e-7■■■□□ 17.1
HSPA8-221ENST00000533540 RBM22Q9NW64 420 aaKnown RBP eCLIP14.03□□□□□ -0.162e-6■■■■■ 34.9
HSPA8-221ENST00000533540 METAP2P50579 478 aaKnown RBP eCLIP16.08■□□□□ 0.172e-6■□□□□ 11.2
HSPA8-221ENST00000533540 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.063e-6■□□□□ 10.9
HSPA8-221ENST00000533540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.29□□□□□ -0.123e-6■□□□□ 10.3
HSPA8-221ENST00000533540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.163e-6■■■■■ 38.3
HSPA8-221ENST00000533540 IGF2BP3O00425 579 aaKnown RBP eCLIP15.75■□□□□ 0.113e-6■■■■□ 24.5
HSPA8-221ENST00000533540 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.193e-6■■■■□ 21.4
HSPA8-221ENST00000533540 PRPF4O43172 522 aaKnown RBP eCLIP13.5□□□□□ -0.253e-6■■□□□ 11.8
HSPA8-221ENST00000533540 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.64□□□□□ -0.234e-6■■■■■ 48.1
Retrieved 67 of 67 RNA–protein pairs in 14.8 ms