RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.72
ATG13-220ENST00000533316 ABCC9O60706 1549 aa23.69■■□□□ 1.38
ATG13-220ENST00000533316 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
ATG13-220ENST00000533316 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
ATG13-220ENST00000533316 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
ATG13-220ENST00000533316 DCAF8L2P0C7V8 631 aa22.11■■□□□ 1.13
ATG13-220ENST00000533316 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
ATG13-220ENST00000533316 NACADO15069 1562 aa22.02■■□□□ 1.12
ATG13-220ENST00000533316 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.08
ATG13-220ENST00000533316 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
ATG13-220ENST00000533316 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
ATG13-220ENST00000533316 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
ATG13-220ENST00000533316 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
ATG13-220ENST00000533316 CECR2Q9BXF3 1484 aa21.31■■□□□ 1
ATG13-220ENST00000533316 SCRIBQ14160 1630 aa21.29■■□□□ 1
ATG13-220ENST00000533316 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
ATG13-220ENST00000533316 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
ATG13-220ENST00000533316 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
ATG13-220ENST00000533316 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
ATG13-220ENST00000533316 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
ATG13-220ENST00000533316 CUX2O14529 1486 aa20.37■□□□□ 0.85
ATG13-220ENST00000533316 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
ATG13-220ENST00000533316 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
ATG13-220ENST00000533316 NESP48681 1621 aa20.28■□□□□ 0.84
ATG13-220ENST00000533316 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
ATG13-220ENST00000533316 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
ATG13-220ENST00000533316 HMGXB3Q12766 1538 aa20.15■□□□□ 0.82
ATG13-220ENST00000533316 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
ATG13-220ENST00000533316 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
ATG13-220ENST00000533316 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
ATG13-220ENST00000533316 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
ATG13-220ENST00000533316 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
ATG13-220ENST00000533316 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
ATG13-220ENST00000533316 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
ATG13-220ENST00000533316 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
ATG13-220ENST00000533316 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
ATG13-220ENST00000533316 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
ATG13-220ENST00000533316 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
ATG13-220ENST00000533316 WIZO95785 1651 aa19.71■□□□□ 0.75
ATG13-220ENST00000533316 WDR62O43379 1518 aa19.66■□□□□ 0.74
ATG13-220ENST00000533316 CEP164Q9UPV0 1460 aa19.58■□□□□ 0.72
ATG13-220ENST00000533316 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
ATG13-220ENST00000533316 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
ATG13-220ENST00000533316 CFTRP13569 1480 aa19.47■□□□□ 0.71
ATG13-220ENST00000533316 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
ATG13-220ENST00000533316 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
ATG13-220ENST00000533316 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
ATG13-220ENST00000533316 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
ATG13-220ENST00000533316 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
ATG13-220ENST00000533316 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
ATG13-220ENST00000533316 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
ATG13-220ENST00000533316 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
ATG13-220ENST00000533316 IFT140Q96RY7 1462 aa19.19■□□□□ 0.66
ATG13-220ENST00000533316 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
ATG13-220ENST00000533316 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
ATG13-220ENST00000533316 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
ATG13-220ENST00000533316 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
ATG13-220ENST00000533316 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
ATG13-220ENST00000533316 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
ATG13-220ENST00000533316 FBLN2P98095 1184 aa19.07■□□□□ 0.64
ATG13-220ENST00000533316 CHD1O14646 1710 aa19.03■□□□□ 0.64
ATG13-220ENST00000533316 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.64
ATG13-220ENST00000533316 TRHP20396 242 aaPredicted RBP19.01■□□□□ 0.63
ATG13-220ENST00000533316 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
ATG13-220ENST00000533316 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
ATG13-220ENST00000533316 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
ATG13-220ENST00000533316 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
ATG13-220ENST00000533316 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
ATG13-220ENST00000533316 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
ATG13-220ENST00000533316 SOGA1O94964 1423 aa18.87■□□□□ 0.61
ATG13-220ENST00000533316 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
ATG13-220ENST00000533316 FGD5Q6ZNL6 1462 aa18.81■□□□□ 0.6
ATG13-220ENST00000533316 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
ATG13-220ENST00000533316 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
ATG13-220ENST00000533316 CUX1P39880 1505 aa18.76■□□□□ 0.59
ATG13-220ENST00000533316 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
ATG13-220ENST00000533316 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
ATG13-220ENST00000533316 MAGI1Q96QZ7 1491 aaPredicted RBP18.69■□□□□ 0.58
ATG13-220ENST00000533316 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
ATG13-220ENST00000533316 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
ATG13-220ENST00000533316 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
ATG13-220ENST00000533316 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
ATG13-220ENST00000533316 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
ATG13-220ENST00000533316 ERCC6L2Q5T890 1561 aa18.58■□□□□ 0.56
ATG13-220ENST00000533316 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
ATG13-220ENST00000533316 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
ATG13-220ENST00000533316 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
ATG13-220ENST00000533316 GRIN2AQ12879 1464 aa18.46■□□□□ 0.55
ATG13-220ENST00000533316 CEP170Q5SW79 1584 aa18.45■□□□□ 0.54
ATG13-220ENST00000533316 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
ATG13-220ENST00000533316 NUP160Q12769 1436 aa18.4■□□□□ 0.54
ATG13-220ENST00000533316 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
ATG13-220ENST00000533316 FHAD1B1AJZ9 1412 aa18.34■□□□□ 0.53
ATG13-220ENST00000533316 SHROOM2Q13796 1616 aa18.33■□□□□ 0.52
ATG13-220ENST00000533316 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
ATG13-220ENST00000533316 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
ATG13-220ENST00000533316 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
ATG13-220ENST00000533316 KIF13AQ9H1H9 1805 aa18.29■□□□□ 0.52
ATG13-220ENST00000533316 JPH4Q96JJ6 628 aa18.28■□□□□ 0.52
ATG13-220ENST00000533316 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms