RNA–Protein interactions for RNA: ENST00000533202.5

TSPAN18-212, Transcript of tetraspanin 18, humanhuman

TSL 4

Gene TSPAN18, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-212ENST00000533202 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
TSPAN18-212ENST00000533202 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
TSPAN18-212ENST00000533202 ABCC9O60706 1549 aa25.19■■□□□ 1.62
TSPAN18-212ENST00000533202 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
TSPAN18-212ENST00000533202 DCAF8L2P0C7V8 631 aa24.42■■□□□ 1.5
TSPAN18-212ENST00000533202 NACADO15069 1562 aa24.41■■□□□ 1.5
TSPAN18-212ENST00000533202 RB1CC1Q8TDY2 1594 aa24.38■■□□□ 1.49
TSPAN18-212ENST00000533202 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
TSPAN18-212ENST00000533202 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
TSPAN18-212ENST00000533202 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
TSPAN18-212ENST00000533202 SCRIBQ14160 1630 aa23.75■■□□□ 1.39
TSPAN18-212ENST00000533202 BICRAQ9NZM4 1560 aa23.6■■□□□ 1.37
TSPAN18-212ENST00000533202 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
TSPAN18-212ENST00000533202 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
TSPAN18-212ENST00000533202 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
TSPAN18-212ENST00000533202 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
TSPAN18-212ENST00000533202 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
TSPAN18-212ENST00000533202 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
TSPAN18-212ENST00000533202 BAZ1AQ9NRL2 1556 aaPredicted RBP22.76■■□□□ 1.23
TSPAN18-212ENST00000533202 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
TSPAN18-212ENST00000533202 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
TSPAN18-212ENST00000533202 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
TSPAN18-212ENST00000533202 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
TSPAN18-212ENST00000533202 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
TSPAN18-212ENST00000533202 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
TSPAN18-212ENST00000533202 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.18
TSPAN18-212ENST00000533202 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
TSPAN18-212ENST00000533202 WIZO95785 1651 aa22.4■■□□□ 1.18
TSPAN18-212ENST00000533202 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
TSPAN18-212ENST00000533202 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
TSPAN18-212ENST00000533202 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
TSPAN18-212ENST00000533202 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
TSPAN18-212ENST00000533202 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
TSPAN18-212ENST00000533202 NESP48681 1621 aa21.86■■□□□ 1.09
TSPAN18-212ENST00000533202 CADPSQ9ULU8 1353 aa21.86■■□□□ 1.09
TSPAN18-212ENST00000533202 CFTRP13569 1480 aa21.77■■□□□ 1.08
TSPAN18-212ENST00000533202 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
TSPAN18-212ENST00000533202 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
TSPAN18-212ENST00000533202 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
TSPAN18-212ENST00000533202 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
TSPAN18-212ENST00000533202 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
TSPAN18-212ENST00000533202 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.04
TSPAN18-212ENST00000533202 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
TSPAN18-212ENST00000533202 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
TSPAN18-212ENST00000533202 CUX2O14529 1486 aa21.41■■□□□ 1.02
TSPAN18-212ENST00000533202 WDR62O43379 1518 aa21.4■■□□□ 1.02
TSPAN18-212ENST00000533202 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
TSPAN18-212ENST00000533202 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
TSPAN18-212ENST00000533202 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
TSPAN18-212ENST00000533202 TOPBP1Q92547 1522 aa21.29■■□□□ 1
TSPAN18-212ENST00000533202 CUX1P39880 1505 aa21.22■□□□□ 0.99
TSPAN18-212ENST00000533202 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.986e-7■■■■■ 33.4
TSPAN18-212ENST00000533202 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
TSPAN18-212ENST00000533202 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
TSPAN18-212ENST00000533202 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
TSPAN18-212ENST00000533202 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
TSPAN18-212ENST00000533202 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
TSPAN18-212ENST00000533202 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
TSPAN18-212ENST00000533202 SOGA1O94964 1423 aa21.04■□□□□ 0.96
TSPAN18-212ENST00000533202 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
TSPAN18-212ENST00000533202 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
TSPAN18-212ENST00000533202 ZNF608Q9ULD9 1512 aaPredicted RBP20.96■□□□□ 0.95
TSPAN18-212ENST00000533202 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
TSPAN18-212ENST00000533202 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
TSPAN18-212ENST00000533202 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
TSPAN18-212ENST00000533202 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.93
TSPAN18-212ENST00000533202 TDRD9Q8NDG6 1382 aaKnown RBP20.87■□□□□ 0.93
TSPAN18-212ENST00000533202 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
TSPAN18-212ENST00000533202 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
TSPAN18-212ENST00000533202 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
TSPAN18-212ENST00000533202 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
TSPAN18-212ENST00000533202 PBRM1Q86U86 1689 aa20.77■□□□□ 0.92
TSPAN18-212ENST00000533202 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
TSPAN18-212ENST00000533202 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
TSPAN18-212ENST00000533202 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
TSPAN18-212ENST00000533202 MAGI1Q96QZ7 1491 aaPredicted RBP20.71■□□□□ 0.91
TSPAN18-212ENST00000533202 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
TSPAN18-212ENST00000533202 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
TSPAN18-212ENST00000533202 ADAMTS12P58397 1594 aa20.61■□□□□ 0.89
TSPAN18-212ENST00000533202 CHD1O14646 1710 aa20.61■□□□□ 0.89
TSPAN18-212ENST00000533202 FBLN2P98095 1184 aa20.59■□□□□ 0.89
TSPAN18-212ENST00000533202 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
TSPAN18-212ENST00000533202 IGF1RP08069 1367 aa20.59■□□□□ 0.89
TSPAN18-212ENST00000533202 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
TSPAN18-212ENST00000533202 CUL7Q14999 1698 aa20.57■□□□□ 0.88
TSPAN18-212ENST00000533202 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
TSPAN18-212ENST00000533202 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
TSPAN18-212ENST00000533202 EEA1Q15075 1411 aa20.52■□□□□ 0.87
TSPAN18-212ENST00000533202 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
TSPAN18-212ENST00000533202 CARMIL1Q5VZK9 1371 aa20.49■□□□□ 0.87
TSPAN18-212ENST00000533202 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
TSPAN18-212ENST00000533202 DNAJC5Q9H3Z4 198 aa20.42■□□□□ 0.86
TSPAN18-212ENST00000533202 NUP160Q12769 1436 aa20.4■□□□□ 0.86
TSPAN18-212ENST00000533202 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
TSPAN18-212ENST00000533202 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
TSPAN18-212ENST00000533202 CLASP1Q7Z460 1538 aa20.38■□□□□ 0.85
TSPAN18-212ENST00000533202 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
TSPAN18-212ENST00000533202 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
TSPAN18-212ENST00000533202 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.84
TSPAN18-212ENST00000533202 KIF21BO75037 1637 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms