RNA–Protein interactions for RNA: ENST00000532993.5

ARHGEF12-213, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF12, Length 8,753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-213ENST00000532993 NISCHQ9Y2I1 1504 aa11.06□□□□□ -0.64
ARHGEF12-213ENST00000532993 MYT1Q01538 1121 aa10.42□□□□□ -0.74
ARHGEF12-213ENST00000532993 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
ARHGEF12-213ENST00000532993 DCAF8L2P0C7V8 631 aa10□□□□□ -0.81
ARHGEF12-213ENST00000532993 TTBK1Q5TCY1 1321 aaPredicted RBP9.78□□□□□ -0.84
ARHGEF12-213ENST00000532993 SUPT5HO00267 1087 aaKnown RBP9.66□□□□□ -0.86
ARHGEF12-213ENST00000532993 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
ARHGEF12-213ENST00000532993 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
ARHGEF12-213ENST00000532993 CCDC180Q9P1Z9 1646 aa9.5□□□□□ -0.89
ARHGEF12-213ENST00000532993 EHMT2Q96KQ7 1210 aa9.5□□□□□ -0.89
ARHGEF12-213ENST00000532993 ZCCHC6Q5VYS8 1495 aaKnown RBP9.49□□□□□ -0.89
ARHGEF12-213ENST00000532993 MYO15BQ96JP2 1530 aa9.46□□□□□ -0.89
ARHGEF12-213ENST00000532993 ZEB1P37275 1124 aaPredicted RBP9.32□□□□□ -0.92
ARHGEF12-213ENST00000532993 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
ARHGEF12-213ENST00000532993 CENPBP07199 599 aaPredicted RBP9.26□□□□□ -0.93
ARHGEF12-213ENST00000532993 YTHDC1Q96MU7 727 aaKnown RBP9.23□□□□□ -0.93
ARHGEF12-213ENST00000532993 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
ARHGEF12-213ENST00000532993 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
ARHGEF12-213ENST00000532993 PCGF6Q9BYE7 350 aa9.11□□□□□ -0.95
ARHGEF12-213ENST00000532993 APLP2Q06481 763 aa9□□□□□ -0.97
ARHGEF12-213ENST00000532993 RANGAP1P46060 587 aaPredicted RBP8.99□□□□□ -0.97
ARHGEF12-213ENST00000532993 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.98
ARHGEF12-213ENST00000532993 CLSPNQ9HAW4 1339 aa8.93□□□□□ -0.98
ARHGEF12-213ENST00000532993 TRIM41Q8WV44 630 aa8.84□□□□□ -0.99
ARHGEF12-213ENST00000532993 ABCC9O60706 1549 aa8.84□□□□□ -0.99
ARHGEF12-213ENST00000532993 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
ARHGEF12-213ENST00000532993 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
ARHGEF12-213ENST00000532993 NEFLP07196 543 aa8.77□□□□□ -1.01
ARHGEF12-213ENST00000532993 HRCP23327 699 aa8.76□□□□□ -1.01
ARHGEF12-213ENST00000532993 NACADO15069 1562 aa8.72□□□□□ -1.01
ARHGEF12-213ENST00000532993 UBTFP17480 764 aaKnown RBP8.72□□□□□ -1.01
ARHGEF12-213ENST00000532993 GLIPR1L2Q4G1C9 344 aa8.71□□□□□ -1.01
ARHGEF12-213ENST00000532993 CHIC1Q5VXU3 224 aa8.7□□□□□ -1.02
ARHGEF12-213ENST00000532993 RSF1Q96T23 1441 aaPredicted RBP8.7□□□□□ -1.02
ARHGEF12-213ENST00000532993 EIF4G1Q04637 1599 aaKnown RBP8.68□□□□□ -1.02
ARHGEF12-213ENST00000532993 LOC105371045A0A1W2PR82 267 aa8.62□□□□□ -1.03
ARHGEF12-213ENST00000532993 TRIM26Q12899 539 aaPredicted RBP8.61□□□□□ -1.03
ARHGEF12-213ENST00000532993 PEG3Q9GZU2 1588 aa8.6□□□□□ -1.03
ARHGEF12-213ENST00000532993 RB1CC1Q8TDY2 1594 aa8.59□□□□□ -1.03
ARHGEF12-213ENST00000532993 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
ARHGEF12-213ENST00000532993 ITGAEP38570 1179 aa8.57□□□□□ -1.04
ARHGEF12-213ENST00000532993 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
ARHGEF12-213ENST00000532993 POLR3GLQ9BT43 218 aa8.51□□□□□ -1.05
ARHGEF12-213ENST00000532993 CNGB1Q14028 1251 aaPredicted RBP8.5□□□□□ -1.05
ARHGEF12-213ENST00000532993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.48□□□□□ -1.05
ARHGEF12-213ENST00000532993 WRNQ14191 1432 aaPredicted RBP eCLIP8.48□□□□□ -1.05
ARHGEF12-213ENST00000532993 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
ARHGEF12-213ENST00000532993 BAZ1AQ9NRL2 1556 aaPredicted RBP8.47□□□□□ -1.05
ARHGEF12-213ENST00000532993 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
ARHGEF12-213ENST00000532993 EEA1Q15075 1411 aa8.42□□□□□ -1.06
ARHGEF12-213ENST00000532993 MROH2BQ7Z745 1585 aa8.4□□□□□ -1.06
ARHGEF12-213ENST00000532993 BCANQ96GW7 911 aa8.38□□□□□ -1.07
ARHGEF12-213ENST00000532993 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
ARHGEF12-213ENST00000532993 CECR2Q9BXF3 1484 aa8.37□□□□□ -1.07
ARHGEF12-213ENST00000532993 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
ARHGEF12-213ENST00000532993 ACIN1Q9UKV3 1341 aaKnown RBP8.34□□□□□ -1.07
ARHGEF12-213ENST00000532993 NCLP19338 710 aaKnown RBP8.33□□□□□ -1.08
ARHGEF12-213ENST00000532993 BICRAQ9NZM4 1560 aa8.3□□□□□ -1.08
ARHGEF12-213ENST00000532993 FAM50AQ14320 339 aaKnown RBP8.3□□□□□ -1.08
ARHGEF12-213ENST00000532993 NEUROD1Q13562 356 aa8.29□□□□□ -1.08
ARHGEF12-213ENST00000532993 SCAF1Q9H7N4 1312 aaKnown RBP8.28□□□□□ -1.08
ARHGEF12-213ENST00000532993 ANP32EQ9BTT0 268 aa8.27□□□□□ -1.09
ARHGEF12-213ENST00000532993 ERICH6BQ5W0A0 696 aa8.26□□□□□ -1.09
ARHGEF12-213ENST00000532993 ARID4BQ4LE39 1312 aaPredicted RBP8.26□□□□□ -1.09
ARHGEF12-213ENST00000532993 SMARCA2P51531 1590 aa8.26□□□□□ -1.09
ARHGEF12-213ENST00000532993 EIF5BO60841 1220 aaKnown RBP8.25□□□□□ -1.09
ARHGEF12-213ENST00000532993 SLC4A1APQ9BWU0 796 aaKnown RBP8.25□□□□□ -1.09
ARHGEF12-213ENST00000532993 SMARCA4P51532 1647 aa8.25□□□□□ -1.09
ARHGEF12-213ENST00000532993 TRIM52Q96A61 297 aa8.24□□□□□ -1.09
ARHGEF12-213ENST00000532993 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
ARHGEF12-213ENST00000532993 PABPN1Q86U42 306 aaKnown RBP eCLIP8.23□□□□□ -1.09
ARHGEF12-213ENST00000532993 ZNF316A6NFI3 1004 aaPredicted RBP8.22□□□□□ -1.09
ARHGEF12-213ENST00000532993 TNIKQ9UKE5 1360 aa8.21□□□□□ -1.09
ARHGEF12-213ENST00000532993 ZNF326Q5BKZ1 582 aaKnown RBP8.21□□□□□ -1.1
ARHGEF12-213ENST00000532993 BCL11AQ9H165 835 aa8.2□□□□□ -1.1
ARHGEF12-213ENST00000532993 NCAPD3P42695 1498 aa8.2□□□□□ -1.1
ARHGEF12-213ENST00000532993 HMGXB3Q12766 1538 aa8.19□□□□□ -1.1
ARHGEF12-213ENST00000532993 ANP32AP39687 249 aaKnown RBP8.18□□□□□ -1.1
ARHGEF12-213ENST00000532993 TNNT2P45379 298 aaPredicted RBP8.18□□□□□ -1.1
ARHGEF12-213ENST00000532993 SCRIBQ14160 1630 aa8.17□□□□□ -1.1
ARHGEF12-213ENST00000532993 TRIM44Q96DX7 344 aaPredicted RBP8.17□□□□□ -1.1
ARHGEF12-213ENST00000532993 BAZ1BQ9UIG0 1483 aaKnown RBP8.16□□□□□ -1.1
ARHGEF12-213ENST00000532993 ARID3CA6NKF2 412 aa8.16□□□□□ -1.1
ARHGEF12-213ENST00000532993 SLC24A1O60721 1099 aa8.15□□□□□ -1.1
ARHGEF12-213ENST00000532993 CCDC88BA6NC98 1476 aa8.15□□□□□ -1.11
ARHGEF12-213ENST00000532993 ANP32BQ92688 251 aaKnown RBP8.14□□□□□ -1.11
ARHGEF12-213ENST00000532993 CUX2O14529 1486 aa8.14□□□□□ -1.11
ARHGEF12-213ENST00000532993 ATAD2BQ9ULI0 1458 aa8.14□□□□□ -1.11
ARHGEF12-213ENST00000532993 ANP32CO43423 234 aa8.14□□□□□ -1.11
ARHGEF12-213ENST00000532993 PRXQ9BXM0 1461 aa8.13□□□□□ -1.11
ARHGEF12-213ENST00000532993 KIF21BO75037 1637 aa8.12□□□□□ -1.11
ARHGEF12-213ENST00000532993 P3H3Q8IVL6 736 aa8.12□□□□□ -1.11
ARHGEF12-213ENST00000532993 ERICH3Q5RHP9 1530 aa8.1□□□□□ -1.11
ARHGEF12-213ENST00000532993 MAP3K1Q13233 1512 aa8.1□□□□□ -1.11
ARHGEF12-213ENST00000532993 WIZO95785 1651 aa8.08□□□□□ -1.12
ARHGEF12-213ENST00000532993 NPM2Q86SE8 214 aaKnown RBP8.06□□□□□ -1.12
ARHGEF12-213ENST00000532993 CFTRP13569 1480 aa8.03□□□□□ -1.12
ARHGEF12-213ENST00000532993 CANXP27824 592 aaKnown RBP8.03□□□□□ -1.12
ARHGEF12-213ENST00000532993 FKBP8Q14318 412 aa8.03□□□□□ -1.12
ARHGEF12-213ENST00000532993 FBLN2P98095 1184 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms