RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 NISCHQ9Y2I1 1504 aa47.01■■■■■ 5.12
CHID1-220ENST00000532909 ABCC9O60706 1549 aa42.1■■■■■ 4.33
CHID1-220ENST00000532909 CCDC180Q9P1Z9 1646 aa42.08■■■■■ 4.33
CHID1-220ENST00000532909 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
CHID1-220ENST00000532909 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
CHID1-220ENST00000532909 NACADO15069 1562 aa39.78■■■■□ 3.96
CHID1-220ENST00000532909 DNAJC5BQ9UF47 199 aa39.34■■■■□ 3.89
CHID1-220ENST00000532909 PABPN1Q86U42 306 aaKnown RBP eCLIP39.25■■■■□ 3.87
CHID1-220ENST00000532909 MYO15BQ96JP2 1530 aa39.22■■■■□ 3.87
CHID1-220ENST00000532909 UNC13AQ9UPW8 1703 aa39.09■■■■□ 3.85
CHID1-220ENST00000532909 ZCCHC6Q5VYS8 1495 aaKnown RBP38.98■■■■□ 3.83
CHID1-220ENST00000532909 BICRAQ9NZM4 1560 aa38.84■■■■□ 3.81
CHID1-220ENST00000532909 DCAF1Q9Y4B6 1507 aa38.78■■■■□ 3.8
CHID1-220ENST00000532909 SCRIBQ14160 1630 aa38.45■■■■□ 3.75
CHID1-220ENST00000532909 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
CHID1-220ENST00000532909 CC2D2AQ9P2K1 1620 aa37.97■■■■□ 3.67
CHID1-220ENST00000532909 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
CHID1-220ENST00000532909 CECR2Q9BXF3 1484 aa37.88■■■■□ 3.65
CHID1-220ENST00000532909 NCAPD3P42695 1498 aa36.73■■■■□ 3.47
CHID1-220ENST00000532909 ATAD2BQ9ULI0 1458 aa36.66■■■■□ 3.46
CHID1-220ENST00000532909 SMARCA4P51532 1647 aa36.64■■■■□ 3.46
CHID1-220ENST00000532909 SMARCA2P51531 1590 aa36.57■■■■□ 3.44
CHID1-220ENST00000532909 BAZ1AQ9NRL2 1556 aaPredicted RBP36.49■■■■□ 3.43
CHID1-220ENST00000532909 HMGXB3Q12766 1538 aa36.46■■■■□ 3.43
CHID1-220ENST00000532909 ERCC6Q03468 1493 aa36.36■■■■□ 3.41
CHID1-220ENST00000532909 BAZ1BQ9UIG0 1483 aaKnown RBP36.35■■■■□ 3.41
CHID1-220ENST00000532909 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
CHID1-220ENST00000532909 PEG3Q9GZU2 1588 aa36.23■■■■□ 3.39
CHID1-220ENST00000532909 NESP48681 1621 aa36.17■■■■□ 3.38
CHID1-220ENST00000532909 CUX2O14529 1486 aa36.16■■■■□ 3.38
CHID1-220ENST00000532909 DNAJC5Q9H3Z4 198 aa36.03■■■■□ 3.36
CHID1-220ENST00000532909 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
CHID1-220ENST00000532909 WIZO95785 1651 aa35.81■■■■□ 3.32
CHID1-220ENST00000532909 PDS5BQ9NTI5 1447 aa35.73■■■■□ 3.31
CHID1-220ENST00000532909 THOC2Q8NI27 1593 aaKnown RBP35.71■■■■□ 3.31
CHID1-220ENST00000532909 CADPSQ9ULU8 1353 aa35.66■■■■□ 3.3
CHID1-220ENST00000532909 KIF21AQ7Z4S6 1674 aa35.65■■■■□ 3.3
CHID1-220ENST00000532909 RSF1Q96T23 1441 aaPredicted RBP35.55■■■■□ 3.28
CHID1-220ENST00000532909 MRC2Q9UBG0 1479 aa35.4■■■■□ 3.26
CHID1-220ENST00000532909 TOP2AP11388 1531 aaKnown RBP35.37■■■■□ 3.25
CHID1-220ENST00000532909 CEP164Q9UPV0 1460 aa35.3■■■■□ 3.24
CHID1-220ENST00000532909 FANCD2Q9BXW9 1451 aa35.28■■■■□ 3.24
CHID1-220ENST00000532909 WDR62O43379 1518 aa35.27■■■■□ 3.24
CHID1-220ENST00000532909 CFTRP13569 1480 aa35.25■■■■□ 3.23
CHID1-220ENST00000532909 SUPT5HO00267 1087 aaKnown RBP35.12■■■■□ 3.21
CHID1-220ENST00000532909 CCDC88BA6NC98 1476 aa34.98■■■■□ 3.19
CHID1-220ENST00000532909 URB2Q14146 1524 aaKnown RBP34.96■■■■□ 3.19
CHID1-220ENST00000532909 PRDM2Q13029 1718 aa34.85■■■■□ 3.17
CHID1-220ENST00000532909 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
CHID1-220ENST00000532909 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
CHID1-220ENST00000532909 OSCARQ8IYS5 282 aa34.6■■■■□ 3.13
CHID1-220ENST00000532909 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
CHID1-220ENST00000532909 ZNF608Q9ULD9 1512 aaPredicted RBP34.52■■■■□ 3.12
CHID1-220ENST00000532909 ABCC8Q09428 1581 aa34.52■■■■□ 3.12
CHID1-220ENST00000532909 DNMBPQ6XZF7 1577 aa34.47■■■■□ 3.11
CHID1-220ENST00000532909 EIF4G3O43432 1585 aaKnown RBP34.31■■■■□ 3.08
CHID1-220ENST00000532909 POLA1P09884 1462 aaPredicted RBP34.25■■■■□ 3.07
CHID1-220ENST00000532909 TARBP1Q13395 1621 aaKnown RBP34.24■■■■□ 3.07
CHID1-220ENST00000532909 AQRO60306 1485 aaKnown RBP eCLIP34.24■■■■□ 3.07
CHID1-220ENST00000532909 RAD54L2Q9Y4B4 1467 aa34.16■■■■□ 3.06
CHID1-220ENST00000532909 SOGA1O94964 1423 aa34.13■■■■□ 3.05
CHID1-220ENST00000532909 FBLN2P98095 1184 aa34.1■■■■□ 3.05
CHID1-220ENST00000532909 TDRD9Q8NDG6 1382 aaKnown RBP34.08■■■■□ 3.05
CHID1-220ENST00000532909 RIMBP3CA6NJZ7 1639 aa34.08■■■■□ 3.05
CHID1-220ENST00000532909 RIMBP3BA6NNM3 1639 aa34.08■■■■□ 3.05
CHID1-220ENST00000532909 RIMBP3Q9UFD9 1639 aa34.08■■■■□ 3.05
CHID1-220ENST00000532909 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.05
CHID1-220ENST00000532909 CUX1P39880 1505 aa34.04■■■■□ 3.04
CHID1-220ENST00000532909 CHD1O14646 1710 aa34.02■■■■□ 3.04
CHID1-220ENST00000532909 ARHGEF11O15085 1522 aa34■■■■□ 3.03
CHID1-220ENST00000532909 SNAPC4Q5SXM2 1469 aa33.89■■■■□ 3.02
CHID1-220ENST00000532909 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
CHID1-220ENST00000532909 CYB5RLQ6IPT4 315 aa33.82■■■■□ 3
CHID1-220ENST00000532909 CHMP7Q8WUX9 453 aaPredicted RBP33.81■■■■□ 3
CHID1-220ENST00000532909 GRIN2BQ13224 1484 aa33.81■■■■□ 3
CHID1-220ENST00000532909 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
CHID1-220ENST00000532909 GAPVD1Q14C86 1478 aa33.71■■■□□ 2.99
CHID1-220ENST00000532909 ARAP1Q96P48 1450 aa33.68■■■□□ 2.98
CHID1-220ENST00000532909 SYNJ2O15056 1496 aa33.67■■■□□ 2.98
CHID1-220ENST00000532909 ABCA10Q8WWZ4 1543 aa33.66■■■□□ 2.98
CHID1-220ENST00000532909 SYNJ1O43426 1573 aa33.65■■■□□ 2.98
CHID1-220ENST00000532909 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
CHID1-220ENST00000532909 CLASP1Q7Z460 1538 aa33.62■■■□□ 2.97
CHID1-220ENST00000532909 WRNQ14191 1432 aaPredicted RBP eCLIP33.61■■■□□ 2.97
CHID1-220ENST00000532909 ABCA5Q8WWZ7 1642 aa33.58■■■□□ 2.97
CHID1-220ENST00000532909 TOP2BQ02880 1626 aa33.51■■■□□ 2.96
CHID1-220ENST00000532909 BIVM-ERCC5R4GMW8 1640 aa33.5■■■□□ 2.95
CHID1-220ENST00000532909 TRHP20396 242 aaPredicted RBP33.45■■■□□ 2.95
CHID1-220ENST00000532909 CHIC1Q5VXU3 224 aa33.42■■■□□ 2.94
CHID1-220ENST00000532909 GRIN2AQ12879 1464 aa33.37■■■□□ 2.93
CHID1-220ENST00000532909 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
CHID1-220ENST00000532909 FHAD1B1AJZ9 1412 aa33.28■■■□□ 2.92
CHID1-220ENST00000532909 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
CHID1-220ENST00000532909 CEP170Q5SW79 1584 aa33.22■■■□□ 2.91
CHID1-220ENST00000532909 NUP160Q12769 1436 aa33.21■■■□□ 2.91
CHID1-220ENST00000532909 ERCC6L2Q5T890 1561 aa33.14■■■□□ 2.9
CHID1-220ENST00000532909 SHROOM2Q13796 1616 aa33.02■■■□□ 2.88
CHID1-220ENST00000532909 PRG4Q92954 1404 aaPredicted RBP32.95■■■□□ 2.87
CHID1-220ENST00000532909 JPH4Q96JJ6 628 aa32.95■■■□□ 2.87
CHID1-220ENST00000532909 KIF27Q86VH2 1401 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms